Garra rufa (doctor fish): 141330956
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Entry
141330956 CDS
T11039
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141330956 (dennd4c)
Membrane trafficking [BR:
grf04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
141330956 (dennd4c)
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Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
141330956
NCBI-ProteinID:
XP_073691869
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All DBs
Position
3:complement(15990219..16060102)
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AA seq
1941 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSEAKSSGPKASITDLAIINKSAGETVPEGFT
CIESTYSGQPANLNHGSLKSPELFLCYKRARGKPPLIDIGVLYEGKERLIQGCEVIEATP
FGRCANVNNSSATSQRIFITYRRAPPVQPQNSLAVTDICVIITNKGETPPHTFCKVDKNL
NCGLWGSSVFLCYKKSVSASNSIAYKAGLIFRYPEEDYESFPLSESVPLFCLPMGAKIEC
WAPNTRYPLPVFSTFVLTNSNGEKVYGAGIQFYEPHPVDGLSEKQKIQLGLVSTVDKKVI
PNRTVNTNKCICLLSRWPFFESFRKFLMFLYKLSANGVNPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLILAQPVCTPLPLSGADYSTLLMNLGPENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRNSNWKNLPKKPCKGLINSLGNLHHQLATVRRAALEGLAVEM
TPIEADFTWHKKKTELEMEIQEAFLRFMASILKGYRTYLKPITQAPSEKATAADSLYDLQ
GFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTSLAFFDDCVGKLFPSDKGTEKG
TKVEGESSEDTRLMELDESQKSEHTVFVMPPEPPPEDGPDPPPKYSYKNFPSLRLELFDH
PQELRPALSTRAAGASVSSSPALLAKRTKQEIKMAYKLAKRFYSNPPQWAKCLFSHCYSL
WFICLPADMRTAQSKPRTMQQAFNVLLKMRSSEVEVLDEVCYRVVMQLCGLWGMPVMAVR
VLMEMKKAGVEPNAITYGYYNKAVLESPWPSRNRSGLFMWTKMRNLVRGVVQFKKALRGT
ALKGGPSLITTELSAGTAAGADGDRLSHGSIDSSNEPIVEKSILFPHSLIVEDAIDSRYS
TAGQSDQGYGSKDELPQDLTDGPITSPPLSTNHTSSSKANGDDIASSVDSVVAVTEPPSP
AEIAPSVASIVKLSAEIPVHFDSTADRGETAGVCTAKLFIPHKKSEDVTLPVVDDFVIPV
LQVSQAGQQQRVKAFVERSCSFSAESKAGMLQKKDSLELSADHMGADAKILASVFSGSLT
PPPFTTTTPFKECKMEATLSPALHEEHEDKQKEHKTFSSAEKKVEKSRRQTDSVDTPQGC
EVVERTISSGSSSSKAVEREDVEVGADPLSLLASETEDATSIQSQESTRPFPPMVSRNLA
DEIEMYMSLKSPLNGKASSMEFQQGTTHESVNCPDSPLERKQSLERRSSLPIGPVKVTSL
METPKRSPAVTRSKTFAVKSPKTPGSAGQRSSSLTALVKSSQSSSLGSVINSISGIKMDS
LLLGPKVDMLKSGMKQAANVASKMWDAVASAYSYSDDEEDSSQPRDSFPARLEEQLLFAE
GATENTLPRGLMPSLASNGLTHSNTSLGSSSGSSDTSRAQLSTPLTPGRSMRGADSERSE
HSSHHASTSSIYQNCALEVLMSSCSQCRSCEALVYDEEIMAGWTADDSNLNCTCPFCQIT
FLPLLHVEFHDLRSTPGFYLKTSTSGDSINSSSTHPTTSGSSEVKVGCSSDPPDLMSSPE
SPEDSKGPVEVPVTQPGTPKILVPEPVHSDPLGLMEKQAEKRNTLTRSNSVGGPLQSLDS
IQRPNHGISTTSLPNSLQEVADTLSQKWPNPKPVSVPYLSPLVLRKELESLLENEGDQVI
YTHKFLSQHPIIFWNLVWYFRRLDLPSILPGLILTSEHCNNGVQLPQASLSQDSKQVYVH
LLWDNVNLHQEPTEPLYQLWRTFLQKKGTLAPTDHQETRTLLNTIVRSIQTNDVYGPINM
LLREIKKRPEVKRQRSIYREILFLSLVALGKENIDVEAFNREYRLAYNELSTEQLKVLSP
IDRPPSNSVQWCLKSFGAPFI
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggataagggtcaccgtgtaacagactactttgtagtggctggcctgactgac
aaatccacaccactagagcaggatctgtctgaagccaagtccagtgggcccaaggcatcc
atcacagaccttgccatcatcaacaagtctgcaggagagaccgtgcctgaaggtttcaca
tgcattgagagtacctacagtggccagccggccaatctcaaccatggcagcctcaagagc
ccagaactcttcctgtgttacaagagggctcgtgggaaacccccactcattgacatcggg
gtcctatatgagggtaaagagcgtctcattcagggttgtgaggtcatcgaagccacaccg
tttggccgctgtgcaaatgtcaacaacagttctgccacatcccagcgcatattcattaca
taccgccgtgcaccccccgtccagccccagaactcactggctgtgactgacatctgcgtc
atcatcacaaacaagggcgagactcctcctcacactttctgcaaagtggacaagaacctt
aactgtggcttgtggggatcgagtgtgtttttgtgctacaagaagtcagtgtctgcctcc
aactccattgcttataaagctggtctgatctttcgctatcctgaggaggactatgaatca
tttcccctctctgagtctgtacctctcttttgcctccctatgggggccaagattgagtgc
tgggctcctaacacacgctaccctttacctgttttctccacatttgtcctcaccaactct
aatggagaaaaggtgtatggagctggaatacagttctatgagccacatcccgtggacggt
ctcagcgagaaacaaaagatccagctaggtctggtttccactgtggacaagaaggtcata
cccaaccgcacagtcaacaccaacaagtgcatctgcctgctatcccgctggcctttcttt
gagtctttcaggaagttcctcatgttcctttacaagctgtcggccaatggagtcaaccct
ctgcccattgagaaacacatatcccacttcatgcacaatgtctccttcccttctcctcag
agaccaagaatactggtccagctgtcggcacatgacaccttaatcctggcccaacctgtt
tgcacacctttaccactaagtggagcagactacagcacactgctgatgaatctgggccca
gaaaattgtgcaacattgctacactttgtcctgctggaaagtaagatcctgttgcactcc
ctcagaccggctgtactgactggggtggctgaggccgttgtggcgatgatcttcccattc
cagtggcagtgtccttatatccctctttgccctctgtctctggcgggggttctcaacgcg
ccatgtccctttattgtgggtgttgactctagatattttgacctctacgatccaccacct
gatgtggtctgtgtggacttggacaccaacactatatacttgtctgatgaaaaaagaaat
agcaactggaagaatctcccaaagaagccctgcaaaggtctcatcaactctttaggaaat
cttcaccaccagcttgccactgttcggcgtgcagcactagaaggcttggcagtggagatg
acccctatcgaggcggacttcacctggcataagaaaaagacagagctggagatggagatt
caagaggcgttcctgcgctttatggcctccatactgaagggctaccgaacctacctcaaa
cccatcacacaagcaccttctgagaaagctactgctgcagactcactctatgacttgcaa
ggattcttaaagagcagagatcgtgcacatcagaagttctactctcagctcaccaagact
cagatcttcatccgcttcattgaagaatgtacttttgttagcgacaaggacaccagcctg
gctttctttgatgactgcgttggaaaactttttccttctgacaaaggaacagaaaagggt
acaaaggttgaaggtgagtcatctgaggacaccaggctgatggaactggatgagtcacaa
aagagcgagcacacagtcttcgtcatgcctccagaaccacccccggaagacggccctgac
cccccacccaaatatagttataagaatttccctagtttacggttggagctgttcgatcat
ccacaagagctgagaccagcgctgagtacaagagctgcaggggccagtgtgtccagcagc
cctgctctgttggccaagagaaccaaacaggaaatcaaaatggcctacaagctggcgaag
cgtttctattccaatccaccccagtgggcaaagtgtctgtttagtcactgctacagtctg
tggttcatctgtcttcctgccgacatgcgtacagcccaatccaagccccgaaccatgcag
caggcctttaatgttctgctcaagatgagaagctctgaggtggaagtgctcgatgaggtg
tgttaccgtgtggtgatgcagttgtgtggtttgtgggggatgcctgtcatggctgtgcgt
gtcttaatggagatgaaaaaggctggtgttgaacccaatgctattacttacggatactac
aacaaggctgtccttgaaagtccttggccaagtcgtaaccgtagtggactttttatgtgg
accaaaatgcggaacctggtgcgaggagtggtgcagtttaaaaaggcgttgcgtgggaca
gctctcaaaggaggaccttctctgataaccacagagctttcagcaggtacagcagctggt
gctgatggagacagactgagtcatggcagtatagacagctcaaatgagcctattgtagag
aaaagcattctcttccctcacagccttatagttgaggacgctattgacagtcgctatagt
acagctggtcagtctgatcagggttatggatctaaggacgagctgccccaggaccttact
gatggacctataacctctccacctctatccaccaaccacactagcagtagcaaagcaaat
ggagatgatattgctagttctgtggacagtgttgtagctgtgacggagccccctagccct
gctgagatagcaccttctgtagccagcattgttaaactgtctgctgagatccctgtccac
tttgacagcactgcagacaggggagaaactgcaggtgtttgcacggctaaactcttcatt
ccccataagaagagtgaagatgtgaccctgcctgtggtggatgattttgtaatcccagtt
ttgcaggtgtcacaggctggacagcagcagagggtgaaagcctttgtggagcgcagctgc
agtttcagtgcagagagcaaagctggcatgctacaaaagaaggacagtctggagctcagc
gctgatcacatgggtgcagatgcaaaaatccttgcatccgtgttttctggcagtctgacc
cctcctccatttacaactaccactcccttcaaagaatgtaagatggaggctacactgagc
cctgccctccatgaagaacatgaagataaacagaaagaacacaaaacattcagttctgca
gaaaagaaagtagaaaaaagtagacggcagacagattcagtagacacgccccaggggtgc
gaagttgttgagcgaaccataagcagtggctcctcctcctctaaagctgtggagagggag
gatgttgaggtgggggcggatcctctttcactccttgcgtcggaaactgaggatgcaacc
tccattcaaagccaggagtccacacggccctttccacctatggtttcaaggaatcttgca
gatgagattgagatgtacatgagcctcaagagccctctaaatggtaaagcttccagcatg
gaatttcaacagggaacaacccacgaatcggttaactgtccagattctcctttggaaaga
aagcagtctttggaaagaagatcgagccttccgatcggaccagtcaaagttactagttta
atggagactccaaagcgtagccctgctgttacacgctctaagacatttgcagtcaagtcc
cccaagaccccaggctctgcaggtcaaaggtcatcatcgctgaccgcacttgtaaagtca
tcacagagcagttcacttggatctgtcatcaactccatatcaggcatcaagatggactct
ctgctgttagggcctaaagtagatatgcttaagtcaggcatgaagcaggcagccaatgtg
gccagcaaaatgtgggatgcagtggcctcagcctactcctactcagatgatgaggaggat
agctcacagcccagagatagtttcccagctagactagaagagcagttgctgtttgcagag
ggagcaacagagaacactttacctagaggcctgatgcccagcctggcctcaaacgggctc
acacacagcaacaccagcctgggcagcagcagtggaagcagcgataccagtcgtgcacag
ctgtcgacacctttgactccaggtcgctcaatgagaggtgcagactcagagaggtctgaa
catagttctcatcatgccagcacctccagcatttaccagaattgtgctttagaggttcta
atgtccagctgctctcagtgtcggtcttgtgaagctctggtgtatgacgaggagattatg
gcaggttggacggctgacgactctaatctcaactgcacctgtcctttctgtcaaatcact
tttctccctctactccatgttgagttccacgacctgcgctcaacaccaggcttctacttg
aagacaagcacatcaggagacagtatcaacagctccagcacacatccgaccacctctggc
tcctctgaagtgaaagtgggatgttctagtgaccctccagacctcatgagctccccagaa
tctcctgaggacagcaagggtccagtcgaagtgcctgtcactcaacctggaaccccaaag
atccttgtacccgagccagtacattcagaccccctgggtctcatggagaaacaagccgag
aaacgcaacactttaactcggagcaacagtgtgggaggcccacttcagagtttggattcg
atccaaagacccaatcatggcatatctactaccagcctgccaaacagcctacaagaggtg
gcggacactttgagtcaaaagtggccgaacccaaaaccagtttctgtgccgtatctcagt
ccactggtccttcgcaaagagttggaatcgctcttagagaatgagggagatcaggtaatt
tatactcataagttcctcagtcaacaccccatcatcttctggaacctggtatggtatttt
cgccgtttagacctgcccagcattctccctggcctcattctcacatctgaacactgcaac
aatggagtacagttgccacaggcatctctgtctcaggacagtaagcaggtgtatgtgcac
ctgctgtgggacaatgtcaacttacaccaggagcccactgagcccctctatcagctttgg
aggactttcttgcaaaaaaagggcactttagcccccactgaccaccaggagactcggact
ctgctgaacaccattgtacgcagcattcagacgaatgatgtttacggccctatcaacatg
ctcctcagagagatcaagaaacgccctgaagttaaacgccagaggagtatctatagggaa
attttgtttctgtcacttgttgccctaggaaaggagaacattgatgttgaggcctttaat
cgtgaataccggcttgcatacaatgagctcagcacagaacagctgaaagtcctatccccc
attgacagaccacctagcaacagcgtgcagtggtgcctcaagtcctttggagccccattc
atctga
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