Garra rufa (doctor fish): 141330979
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Entry
141330979 CDS
T11039
Symbol
poln
Name
(RefSeq) DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
141330979 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
grf03400
]
141330979 (poln)
Enzymes [BR:
grf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
141330979 (poln)
DNA repair and recombination proteins [BR:
grf03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
141330979 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
141330979
NCBI-ProteinID:
XP_073691896
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All DBs
Position
3:complement(47963445..48019011)
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AA seq
1146 aa
AA seq
DB search
MESYLCSSLNAAPLSAAAQSIIAALRVQYVHRTGRSRATLSGTVFRLPQQQDMDDRNQDL
CAGKSRALDFNDLVEHSNHIKLKDVTSNERSTVYHAVDIKPNIQPYIPIAQGEDSLHKFS
LNNMGSPQTRPEIMTETEIHRLTFGKRSWNQPARPTEKDPVGCDQHEAPPVKKFNFEQLT
TALLTKNCHPATGEEEKRIDIVEGVGQPFWSCQSGLTAKDSSYSVFEGISKETRADQHSN
NMSNVEKPPSKSEDLESSHYWQNSENPELSVLMESCVDAEICGSVSALQCVQDKPVRSGE
ILDSVKEKDRSGSERREIAESKTSSPQPDENTILMSAGEMDGKIESTVPPTSGEVQHSIQ
SHSQAGEIKSFPKHVGKLEPPGPSQEAPKITSSQELRKKTLRSLRFPSQLIHKAKVKGSK
KLLKPKTPQPTAKRQRHPLRPQKDLKSQGCNKSNRSKPQSCETPLETEKKEDGTTATARG
AFSLTSDPRVCDTGRLSQEERECLFEEAGKAKAFVVTMVYQDGTIQLDPEQKLCPSVCGL
LVLLKRDLDSEGPQDRPPERVLYLKLEQAPAWAQQDCTQKQDVFTREILMQMMCDTKPFV
CFKAKDLLRTALKHFSKDLSWKQVLGCQVMDPQIAAWMLDPADSAFCFQTLLSKHYSHPV
TSTSLQPVLGQAKVTQVISNLFLLYNLMEELHNKLQTQGLWQLYSGIEQNIIPVLAAMES
YKMHVDKEALKNTSELLGSKMKQLEQEAHKAAGQKFLVSSSAQLRLILFEKLRLHELCEN
KKLPKTIKKQQSTSETALLQLQKLHPLPKIILEYRQIHKIKTAFVDGILSCMSKTFISST
WNQTSAVSGRLSAKHPNFQALPKQPLQISKKQYIQGKISDVVTVHPRAMFIPREGWTFLS
ADFCQVELRLLAHLSADPQLLRIFQNTEADAFTMLAAQWKGLSEDRVSLEDREHAKRIVY
SVVYGAGRERLSGILGVSAEEASRFQDTFLQAYREVPAFIQHTIQHCHEHGFVKSIMGRR
RSLPHIHSADWSLRNQAERQAVNFVLQGSAADLAKMAMIRICSQVASASYTARLVAQIHD
ELLFEVEISQLEQFAVLVKKTMESLQHIENWGVNLFVPLKVLLSTGPSWGSMCEMSLPCT
TTATSL
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctacctctgcagcagtctgaacgcagcccctctctctgcagctgcacagagc
atcatagcagcccttcgggtccaatatgtgcaccgaacaggcagaagcagagctacctta
tctggtacagtgttccgactgcctcagcagcaggacatggatgacagaaatcaagatttg
tgtgcagggaaaagcagagccttggattttaatgatctggtggagcattcaaaccacatc
aagttaaaggatgtgaccagtaatgaaaggtctactgtataccatgctgttgatataaag
cccaacatccagccttatataccgatagcacagggagaagacagtttacataaattcagc
ttaaataacatgggaagccctcagactagaccagaaattatgacagaaactgagatccat
agactgaccttcggtaagaggagttggaatcaaccagcaagacccactgaaaaagaccca
gtaggttgtgatcaacatgaggctcctccagttaagaagttcaactttgagcagcttact
acagcactgcttactaaaaactgtcatccagcaactggagaagaagaaaagaggattgat
atcgtggagggtgtaggacagccattttggagttgtcaatcggggttgacagcgaaagat
agtagttattctgtttttgaaggaatctcaaaagagaccagagctgaccagcacagtaat
aacatgtctaatgtagagaaaccaccatctaaatctgaggacctggagagcagccattac
tggcaaaatagcgaaaaccctgaattgtcagttctaatggaaagctgtgtagatgccgaa
atatgtggaagcgtttcggccctccaatgtgtgcaagacaaacctgttaggtcaggtgaa
atactggactctgtgaaggaaaaagacagaagtggctctgaaagaagagagattgcagag
agcaaaactagttctccccagccagatgagaatacaatcctgatgtctgctggagagatg
gatggaaaaattgagtcaacagtaccccccaccagtggtgaagtgcagcacagcatccag
tcccattctcaggctggtgagattaaatcatttccaaagcatgttgggaaattggaaccc
cctggaccctcacaggaagctcctaagatcacttcatcacaggagttgcgcaaaaagaca
ctcagatccctgaggttcccctcgcagctcatccacaaggcaaaagtaaagggctcaaaa
aagcttctaaaaccaaaaactccacagcctacagccaagaggcagagacatcctctcaga
ccccaaaaagatttaaagagtcaaggatgcaataaatcaaatcgctccaaaccacaaagc
tgtgaaacaccattagaaacagagaaaaaagaagatggaaccactgcaactgctagaggg
gcttttagtttgacctctgaccccagggtgtgtgacaccggccgtctctcacaagaggag
agagagtgtttgtttgaggaggctggaaaagcgaaagcatttgttgttaccatggtatac
caagatggcaccatacagttggacccagaacagaagctgtgcccttcggtgtgtggcctt
ctggttctgttgaagagagatttagattcagagggaccacaggacagaccaccagagaga
gtgttgtacctcaaactagagcaggcaccagcctgggcccaacaagactgtacacaaaag
caggatgtctttaccagagaaatcctcatgcaaatgatgtgtgatacaaagccgtttgta
tgctttaaagctaaagacctgctgcgcacagcactgaaacacttcagcaaggacttgagc
tggaaacaagtgttggggtgtcaagtgatggatcctcagattgcagcatggatgttagat
cctgccgactctgcgttctgctttcagaccctgctttccaagcactactcacatccagtt
acgtccacatcattgcaacctgtgcttgggcaagccaaggtgactcaagtgatctcaaac
ttgtttctcctatacaatctaatggaggaactgcataacaagcttcagactcagggactg
tggcagctctattctggcatagaacaaaacataattccagttctggcagcaatggaaagc
tataaaatgcatgtggacaaggaggccttgaaaaatacttcagagctcctggggtctaag
atgaagcagttagagcaggaggctcacaaggctgcaggtcaaaagttcttggtgtccagc
agtgctcagcttagattgatcttgtttgagaagctgcgtttacatgagctttgtgagaat
aagaagcttcccaaaacaatcaaaaaacagcagtccacctcagaaacagcactattgcaa
ctacagaagctgcatccactgcccaaaatcatacttgaatacagacagattcacaaaatc
aagactgcatttgtggatggcattttgtcctgtatgagcaagacgttcatttcttccaca
tggaatcagacaagtgcagtgagtggaagactgtctgctaaacatcctaattttcaagct
cttccgaagcagccactgcagatctctaagaaacagtacatccaaggaaagatctctgat
gtcgtgactgttcacccacgtgccatgttcattccacgagagggttggactttcctctct
gcagatttctgtcaggtggagctgcgtctcttggctcacctgtcagctgacccacagctg
ctgagaatctttcagaacactgaagcagacgccttcaccatgctggcagcccagtggaag
ggtttgagtgaggacagagtgagtctggaggacagagagcatgccaagcgtatcgtctac
tctgtggtttatggagctggaagagagcggttgtctggtattcttggtgtgagtgcagag
gaggccagtcgttttcaggacacttttctacaggcgtacagagaggtgccggccttcatc
cagcacacaatccagcactgccacgaacacggttttgtcaagtccataatgggaaggcgc
cgttccctccctcacattcactccgctgactggagccttcgaaaccaagcggagagacag
gcggtcaactttgtactacagggctcagctgcagacctagccaaaatggcaatgatcaga
atctgctctcaagtggcttctgcctcttacactgccaggctggtggctcaaatccatgat
gagctgctgtttgaagtggagatctcacaattggagcagtttgctgtgttggtgaagaag
actatggaatctcttcagcacattgaaaactggggagtgaatctctttgttcccctcaaa
gtcttgctgtccacaggaccatcatgggggtcgatgtgcgagatgagcctcccctgcacc
accacagctacttctctctga
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