Garra rufa (doctor fish): 141331001
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Entry
141331001 CDS
T11039
Symbol
stim2b
Name
(RefSeq) stromal interaction molecule 2
KO
K18196
stromal interaction molecule 2
Organism
grf Garra rufa (doctor fish)
Pathway
grf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
141331001 (stim2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
grf02000
]
141331001 (stim2b)
Transporters [BR:
grf02000
]
Other transporters
Pores ion channels [TC:
1
]
141331001 (stim2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOAR
EF-hand_STIM1
SAM_2
SAM_1
DUF7098
Motif
Other DBs
NCBI-GeneID:
141331001
NCBI-ProteinID:
XP_073691924
LinkDB
All DBs
Position
3:20937679..21007163
Genome browser
AA seq
735 aa
AA seq
DB search
MTFLSGAAVLLLRGLVISAVLGLESSYTSQLSNRVTPDPAAAAAAVAPTDPCLTVIPPCM
NEADRFSLEALRHIHKQLDDDNDGGIEVNESVEFIIEDMKQHQTNKHSNLHREDQHITVE
ELWKGWKISEVHNWTLEDAVQWLKDSVELPQYEKNFRDFKVDGNTLPRIAANEPTFMSMQ
LKILDQRHKQKLNLKALDAVLFGPPLRPHHHWLKDFVLMISIIIGVGGCWFAYIQNKSSK
VHISQMMKDLESLQNAEQSLIELQSRLEKAQEENRTVAVEKQNLEQKMRDEITGAKREAS
RLRELREGAECELSRLKYAEEELVQVRMALKRAEKEMHSDWSVPEALQMWLQLTHEVEVQ
YYNIKKQHAEMQLTVAKDEAEKIKKKRNSVFGTLHVAHSSSLDEVDHKILEAKKSLSEVT
ACLRERLHRWQQIEKLCGFPVVNNSGLPSLTASLYADHSWVVMPRMSVPPYPIAGGVDDL
DEDTPPIIPQFTSPLIRPPLTRNSSVCRSRRSLLSQPSLSPDPDLLSMASASLAYRPEGD
DDHIFFTVERKGDRLKDPQDTCSDSDSLGSSLGRKQFSGPSVQSTCATGTDTPPCKISRE
ELLLLAQEAQAVAMESFPSSTSSPSSPLDSSSVHKGSPDLTRSSVLPESQSLTFHPGTKA
VAYNGILEKSYSMGQLPAGGTIPEGHYPSISSLDIESKAIKEPKQLQTTSSQDSCDNGEK
KRSKIKSLFKKSKKL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgactttcttgtccggggcagcggttctgttgctgcgtggactcgtcatctctgcggta
ttgggcttagagagttcatacacgagtcagttgtcgaaccgagtcactcctgatccagca
gcggcagcagcagctgttgctcctacagacccttgtttgacagtcatcccgccatgtatg
aatgaagccgaccgtttcagtttagaggcgctccggcacattcacaagcagctagatgac
gacaacgatggaggaattgaagtgaatgaaagtgtagagtttatcatagaggacatgaag
cagcaccagaccaataaacacagtaatcttcaccgagaggaccagcacatcacggtcgag
gagctgtggaagggctggaaaatatcagaagtgcacaattggacactggaggatgcagtc
cagtggctgaaagattcagtggagcttcctcagtacgaaaaaaacttccgagattttaaa
gtagacggcaacacgctacctcgaatagcggccaatgaaccgacgtttatgtcaatgcag
ctaaagatattagaccaacgacataaacagaaattaaatctaaaagcgttggatgcagtg
ctatttggacctccactacgtccacaccatcactggctgaaagactttgttttgatgatt
tcaatcatcattggtgtgggaggctgctggtttgcgtacatacagaacaagtcgtctaaa
gttcacatctcccagatgatgaaagatctggagagtctacagaatgctgaacagagcctg
atcgaactacagagccggctggaaaaggctcaggaggagaaccgcacagtggcggtggag
aagcagaacctggagcagaagatgcgtgacgagatcactggagcaaagagagaagccagc
agactgcgagagctgcgagagggcgctgaatgtgaactcagcagactcaagtacgcagag
gaggaactagtgcaggtgcgaatggcactgaagagagcagagaaggagatgcactcagat
tggtcggtgccagaagccctgcagatgtggcttcagctcacacatgaggtggaagtgcaa
tactacaacattaaaaaacagcatgctgagatgcagcttacggtcgcaaaggacgaggct
gaaaagatcaagaagaagaggaactctgtgtttggtactctccatgttgcacacagctca
tcgctggatgaagtagaccacaaaatacttgaggctaaaaaatcactatcagaggtcaca
gcctgtttgcgtgaacgtcttcaccgctggcagcaaatagagaagttatgtggctttcca
gttgttaataactctgggctgcccagcctcaccgcctctctgtacgccgaccacagctgg
gtggtcatgccgcggatgtcagtgccaccctacccaatcgctggtggagtggatgatctc
gatgaagacacaccaccaatcattccacagttcacctctcctttgattcgacctcctctg
actcgcaacagcagtgtgtgtcgttctcgcagaagtcttctgtctcaaccctcactttct
cctgatcctgacctgttgtccatggcctcagcctcactggcctacagacccgagggagac
gatgatcacatcttctttactgtagaaaggaaaggggatcgtttaaaggatcctcaggac
acatgttcagattcagattctctcggttcctctttgggcaggaagcagttctccggtccc
tctgttcaaagtacatgtgctactggcacggataccccaccctgcaaaatctctcgtgag
gaacttcttctcttggcgcaagaggcccaggctgttgccatggaatcctttccttcttcc
acatcctcgccttcatctcctcttgactcctcctcagttcacaagggctctcctgacctt
acccgctcttccgtcctcccagagtctcaaagtttaacctttcaccctggcaccaaagct
gtggcctataatggcattctggaaaagtcatacagcatgggccagctacccgctggtggg
acgattccagagggacattacccctcgattagctcactcgacatagaaagcaaagctatc
aaggagcccaagcaactccaaaccacctcctcccaggactcttgcgataacggagagaaa
aaacgctccaagatcaagagcttgttcaagaaaagcaaaaagctgtga
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