Garra rufa (doctor fish): 141331026
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Entry
141331026 CDS
T11039
Symbol
cdh11
Name
(RefSeq) cadherin-11
KO
K06803
cadherin 11, type 2, OB-cadherin
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141331026 (cdh11)
Cell adhesion molecules [BR:
grf04515
]
Cadherins
Major cadherins
141331026 (cdh11)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
ASFV_J13L
Cadherin_4
PDDEXK_1
Motif
Other DBs
NCBI-GeneID:
141331026
NCBI-ProteinID:
XP_073691957
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All DBs
Position
3:27227013..27286438
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AA seq
800 aa
AA seq
DB search
MWEGLRLQVFFLCLGAALWSAAAAATYRGSGPRERGHRRHLSLHRHRERGKEGQVLHRSK
RGWVWNQFFVIEEYTGPDPVLVGRLHSDVDSGDGNIKYILSGEGAGTIFVIDDKTGNIHA
TKTLDREEQAQYTLTAQAVARDTNKPLEPPSEFIVKVQDINDNPPEFLHGPYYARVAEMS
NVGTSVIKVTATDADDPTYGNSARLVYSILQGQPYFSVEPQTGIIRTALPNMDREARQEY
DVVIQAKDMGGHMGGLSGTTQVKITLTDVNDNPPKFTQTVYAMAVSEDKVPGEEVGRLKA
KDPDLAENGLVDYRILEGDGMNLFEISKDSETQEAVIKLKKTVDFETKRSYTLRVEASNP
HVDPRFAAWGPYKDTTTVKISVEDADEPPTFMAPSYNFEVEENAPAGTVVGRVHAKDTDI
MNNPVSYMIPRYTDLEEFFTINPEDGIIRTTRPLDREAQAWHNISVSATESGGHHQDAKV
RVNIKVKDVNDNAPEFATQNEVLVCENVNPGKLIETVSATDKDEMAHRQHFHFSLAPEVA
NNHSFSLKDNRDSTASIFVIRKGFSRMTQDVYHLPIEINDNGVPPMSSTNTLIVRVCSCD
SKDTILSCNVEPFILSAGLSTGALIAILACIVILLAIVVLFVALRRQKKEPLIVFEEEDI
RENIITYDDEGGGEEDTEAFDIATLQNPDGANGFLPRKDIKPELQYPMRPGLRPIGNSVD
VDDFIKTRISDADNDPTAPPYDSIQIYGYEGRGSIAGSLSSLESVTTDSDLDYDYLQSWG
PRFKKLADLYGTKDSADDNS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtgggagggactgagattgcaggtgttcttcttgtgtttgggggccgcactatggagc
gctgcagcggcagcgacgtacagaggctcaggtccacgggagcgcggtcatcgccgccat
ctctctttgcacagacacagggagcgaggcaaagagggccaggtgcttcaccgctccaaa
cgaggttgggtctggaaccagttctttgtcattgaggagtacacaggcccagatcccgtc
ttagtaggtcgacttcattcggatgtagattcaggagatggaaacattaaatacatcctt
tcaggggaaggagcaggcactatttttgtcatcgatgacaaaacaggcaacattcatgcc
acaaagacactggacagagaagaacaggcccagtacaccctgaccgcccaggctgtggct
cgagacaccaacaaacccctagagcctccctcagagttcattgtcaaggtgcaggacatc
aacgacaatccaccagagttccttcatgggccttactatgcgcgagtggctgagatgtcc
aatgttggtacttcagtgataaaggtcacagctacagacgcagatgaccctacgtacggc
aacagcgccagactggtctacagcatcctgcagggccagccttatttttccgtggagcca
caaacaggaatcattcgaacagctcttcccaacatggacagggaggccaggcaggagtat
gacgttgtcatccaggccaaggacatgggtggacacatgggcggtctgtcaggaaccact
caggttaaaatcaccctgactgatgtcaatgacaaccctccgaagttcactcagactgtt
tacgccatggcggtctcggaggacaaggttcccggtgaggaggtgggtcgattgaaggcc
aaagatcccgatctggcggagaacggtctggtggattatcgcatcttggagggagacggc
atgaacctcttcgagatctccaaggactcggagacccaggaggcagtcatcaaactaaag
aagactgtggactttgagaccaagcgatcgtacacgctaagggtagaagcctccaaccca
catgtggacccacgtttcgctgcttggggtccatacaaagatactaccactgtgaaaata
tcagtagaagatgcagatgagcccccgaccttcatggctcccagctacaattttgaggtg
gaggaaaacgccccagcgggcactgtggtcggccgtgtgcatgccaaagacactgacatc
atgaacaaccccgtcagttatatgatcccacgctacacagacttggaagagtttttcacc
attaatcctgaggacggcattattaggaccacaaggcctttagatcgggaagcacaggct
tggcacaacatttccgtcagtgctacagagagtggcggccatcaccaagatgcaaaagta
cgagtcaatatcaaagtcaaagatgtgaatgacaacgctccagaatttgccactcaaaac
gaagtgcttgtctgtgaaaatgtcaaccctggaaagctcattgagacagttagcgccacg
gataaggacgaaatggcccaccgccagcacttccacttcagcctggcccctgaggtcgct
aacaaccacagtttctccctcaaggacaacagagatagcaccgctagcatctttgtgatc
cggaagggcttcagcagaatgacccaggatgtctatcaccttcccatcgagattaatgac
aacggcgtacccccgatgagcagtaccaatactcttatagtccgtgtgtgcagctgcgac
agcaaagacaccatcctctcctgcaatgtggaaccttttatcctgtctgcagggctcagc
accggcgctctgattgccatcttggcctgtattgttattctactggcgatcgtggtgctg
ttcgtggccctgcggcgccagaaaaaggagcctttgatcgtattcgaggaggaagacatt
cgggagaacatcatcacctatgatgatgagggaggcggagaggaggacaccgaggcgttt
gacatcgccaccttacagaacccagatggcgccaacggcttcctgccccgtaaggacatc
aagcccgagctgcagtatcccatgcgccccggcctgaggcccattggcaacagcgtagac
gtggatgatttcatcaaaacacggatttctgacgcggacaatgaccccacggcgcccccg
tatgactccattcagatctacggttacgaaggtagaggctctatcgccggctctctcagt
tctttggagtcggtgaccacagattcagacctggactacgactacctccaaagctggggg
ccgcgcttcaagaaacttgccgacctttacggcaccaaagactccgctgatgacaactct
taa
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