Garra rufa (doctor fish): 141331037
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Entry
141331037 CDS
T11039
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
grf Garra rufa (doctor fish)
Pathway
grf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
141331037 (scrib)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_9
LRR_LRWD1
LRR_13
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
141331037
NCBI-ProteinID:
XP_073691973
LinkDB
All DBs
Position
3:complement(29518178..29621676)
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AA seq
1917 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLTAVPDEIYRYNRSLEELLLDANQLRELPKPFFRLHN
LRKLSLSDNEIQKLPPDVANFTQLVELDISRNDISEIPENIKFCQALEIADFSGNPLSRL
PDGFTQLRGLAHLSFNDVSLQSLPNDIGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLD
LGSNVLEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTEIS
GLIALTDLLLSENLLEVLPDSIGSLKKLSILKVNQNRLVHLTDSIGECENLTELMLTENL
LQSLPRSLGKLKKLTNLNVDRNRLSSVPAELGGCVSLNVLSLRDNRLGKLPAELANATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
SSSLENLLDRSADETWPTDTNLNRVSVIQFQDDSKHEDEDEETAAERRQGLQRRATPHPS
ELKVMKNVIEARRNEAYTAKPDEDLESPDTEEKRLSGLSNQSHDSQASSSTASATSQDEK
RGINNTGVEINDGQGQEEEELDEMEVEYTEPTVHFAEEPIIRGGDEEDDDENEVDDEDAE
RSDEDSRTPPFPAEKQRLIRKDTPHYKKHFKITKLPKPETVAALLQGFSHDGLSPTAHTP
EDERDGEEEEEEDEEDEGGVTVNTPFQHRLEAAELEDSRLSQMNSSLQPVKGVSFDQVNN
LLIEPARIEEEELTLSILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGV
KVGDKLLEVNGVDLHGAEHHTAVEALRNSGAAVVMTVLRERMVEPENAITTTPLRPEDDY
FPRERRSSGLPFLLDPASPAVSTGPMQRLATSLVRNDKGLGFSIAGGKGSTPYRVGDTGI
FISRIAEGGAAHRDNILHVGDRVISINGVDMTEARHDQAVALLTGTSPTITLLVERDQAS
AGGASPRTRPHSPPPPEPSDSPEQEEGDEHLGNHLNCPMEDEYPIEEVTLIKAGGPLGLS
IVGGSDHASHPFGINEPGVFISKVIPNGLASQSGLRVGDRILEVNTIDLRHATHQEAVRA
LLSNKQEIRMLVRRDPSPPGMQEIVIHKLPGEKLGISIRGGAKGHAGNPFDPTDEGIFIS
KVSSSGAAARDGRLRVGMRILEVGNNSLLGMTHTEAVRVLRASGDSLVILVCDGFDPRNA
ASIEASPGVIANPFAAGIVRKNSMESISSVDRDMSPEEIDIMQKEVEMVRETSQWEREEM
EKVERMRLEREEATRLLEEETENLSTGPLKLDYKTLAALPTTSLQKVNRSSPSEPHRIDS
PVRDAAHSPHNSQQSHKSSSAMLGREVRYSNIHFPSNANTKDNSSTKPGAIQPLSRVRPA
VSPASQDGHSSPNPFQHGLSPINSQTTPRAPSPDTHEEYPINIKQVYKAFAAVPHSLAVL
EPPQDLYSPRNNVSPMQPSPEPELSNEVFMDEADGEGNGPHKPRPSLLSDRREYRSLAAV
PRLSRPSVESKTPTPTNLGRDSPEQRSFRDRQKYFEIDVKQQTPDKPKPRISLVGEDDLK
KMKEEEAKRMEQRAQEYMLDEDEEDEEEDLAKQVADMKARGKVVLDGVEYKVESLGSRSS
PSPRQCATPPSHCGSSGPSSVDGKGDSQRNSMEDSFRLEQRPNSMTGLIPVYPGESVAPI
RTAKAERRHQDRLRMQSPELAVAMDKELSPAEKRALEAEKRAMWRAARPYGLEEDVRQYE
QDLAKRLYQSRVRASLGSAAALPTSCSSSSCQPRMKSLEQDALKAQMVIAKSKEGKKRGT
LDQLSESPSPAPTPSPTPMEDFSPRAVTSPGRLSLSEKKFDYRQFAAIPSSKPVYDIQSP
GAGDDVRFMDDASSNPVSVIDPEVPVAATSALEEMALYSNKRKLRQGRRSLEAPVPT
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatcccgctgtggcggtgtaaccgtcatgtcgagtctgtggataagcgg
cactgctcgctcactgcggtgcccgatgagatctaccgctacaaccgcagtctggaggag
ctgctcctggacgccaaccagctgagagagctgcctaagcccttcttcagactgcacaat
ttgcgaaagctgagcctcagtgacaatgagattcaaaaattaccgcccgacgttgccaac
ttcacgcagctggtggagctggacatctcaagaaatgatatttctgagattcctgaaaac
attaaattctgtcaggccttggagattgcagacttcagcggaaaccccttgtccaggttg
cctgatggcttcacacagctcagaggactggctcacctatcattcaatgacgtgtcgctg
cagtctctacccaatgacattggaaacttgtcaaacctggtgactctagagctgagggag
aatctactgaaatctttaccctcctccctttccttcctggttaaactggaacagctggat
ctgggcagcaatgtactggaagttttgcctgacacacttggggcactgcccaatcttcgt
gagctttggttggacagaaaccagctctcctcactacctcctgagctggggaacctgcgg
cagctggtttgcttggacgtgtcagagaaccgtctatcagagcttcccacagagatcagt
ggccttatcgccctcacggacctgctgctctctgagaacctcctggaagtcttgccagac
agcattggctcacttaagaagttgtccattctgaaagtgaaccagaaccgcttggtgcat
ctcacagactctattggcgagtgtgagaacctgacagagctcatgttgactgagaacctt
ctccagtcccttcctcgctcacttgggaagttaaagaagctgaccaacttgaatgtggac
cgaaaccgcttgagcagcgtaccagcagaactgggaggttgtgtcagcctgaacgtgctc
tccctcagagataaccgtttgggaaaactacctgctgaacttgccaatgcaacagaatta
catgtgctggacgtggcaggcaacaggttgcagaatttaccattcgcattggccaatctg
aacctgaaggccatgtggctggcagagaaccagtctcagccaatgctgaagttccagaca
gaggatgatgagcggactggagaaaaagttcttacctgttacctgctgcctcagcaaccc
tcgtcgagtcttgaaaatctactggacaggagtgccgatgaaacctggcccacagacact
aatttgaacagagtatcggtcattcagttccaggatgactccaaacacgaagacgaagat
gaggagactgcggcagagaggaggcagggtcttcagagaagagccacaccgcatcccagt
gagttaaaggtgatgaagaatgtcattgaagccagaagaaatgaggcttatacagccaag
ccagatgaggatctggagtcaccagacactgaggagaaacggttgagtgggctgtccaat
caaagtcatgattctcaggcatccagtagcaccgcctctgccacatctcaggatgagaag
cggggtataaacaacacaggggtggagattaatgatggacagggtcaagaggaagaggaa
ctggatgagatggaggtggagtatactgagcctactgtgcactttgctgaagagcccatc
atccgtggaggtgatgaggaggacgatgatgaaaatgaagtagatgatgaagacgctgaa
agaagcgatgaagactctcgaacgccgccttttcctgcagagaaacagcggctcatacgt
aaagacacaccacactacaaaaagcacttcaagatcaccaagctgcccaaaccagagact
gtcgccgccctgctgcaagggttcagtcatgacggcctctcacctactgctcatacccct
gaggacgaaagggatggtgaggaggaggaggaggaagacgaggaggacgagggaggagta
acagtcaataccccttttcagcacagactagaagcagcagagctagaagacagcagactg
agtcagatgaactcgtccctacagccagtgaagggggtgtcatttgatcaagtcaataat
ctgctgattgagcctgctcgaattgaggaggaagagctgaccctgtctatcctgaggcag
actggtggtttaggcatcagcatagcaggggggaaaggatctacaccctataagggcgac
gacgagggtattttcatctctagagtgtcagaagagggccctgcagctcgtgctggggtc
aaagtgggagacaaacttcttgaggttaatggggtagacctgcacggagcagagcatcac
acagctgtcgaggccttgcgcaactcgggggcggccgtggttatgaccgttctgcgggag
cgcatggttgaaccagagaatgccatcaccaccacgccgttgagaccagaagatgattat
ttcccccgggagagacggtccagtgggctgcctttcctcctggaccctgcctcacctgct
gtcagcactggacctatgcagcgactagccacttctctggtccgcaacgataaaggttta
gggttcagcattgctggagggaaagggtcaaccccttatcgagtaggagacacgggaatc
ttcatctctcgtattgctgaaggaggagctgctcacagagacaatatcctgcacgtggga
gacagggtcatatcaatcaatggtgtagacatgacagaggccagacatgaccaggcagta
gcgctgcttaccggaacctcccccaccatcaccctcctggtcgaacgggaccaggccagt
gcagggggcgcctcccctcgaactcgacctcattcaccccctcctccagagccgtctgac
tcacctgagcaagaggaaggagatgagcatcttggaaaccatctcaactgccccatggaa
gatgaataccccattgaggaagtgacgctgatcaaagcaggtggtcccttgggtctgagc
attgtagggggtagcgaccatgccagccacccttttggaattaatgagccaggggtgttc
atctcaaaggtcatccccaatggcttggcctctcagagtggactccgtgttggcgatcgt
atcttggaggtgaacaccattgacctacgacatgccacgcatcaggaagctgttagagcc
ctgctctccaacaagcaggaaatccgcatgcttgtgcgcagagatccctcgccccctggc
atgcaggagattgtcattcacaagcttcctggagaaaagctgggtatcagcatcagaggc
ggtgctaaaggccatgcaggcaacccctttgaccccacagatgagggcatcttcatttcc
aaggtgagctccagcggtgctgctgcacgagatggccgtctgcgggtgggaatgcgtatt
cttgaggtgggcaacaacagtctgctgggtatgacgcacacggaagcagtgagggtcttg
cgtgcgtccggtgactccttggtcatacttgtgtgtgatggctttgacccaagaaacgct
gcgagcatagaggcatcccctggtgttattgcaaacccgtttgcggcaggtattgttcgt
aagaacagtatggagagcatctcatcagtagacagagacatgagtcctgaagagattgac
atcatgcagaaggaggtagagatggtaagggagacgtcccagtgggaacgggaggagatg
gaaaaagtggagcgtatgcgcttggagcgcgaggaggcaactcgtttgctggaggaggaa
actgagaatttgagcactggaccactgaaactggactacaagacactggcggctctacct
accactagtctacagaaagttaatagatcttcaccgtctgagcctcacaggattgacagt
cctgtccgagatgctgcacactctccacacaactcacagcagtcccacaaatcttcctct
gcgatgcttggaagggaggttcgatattcgaacattcatttcccatcaaatgcaaacacc
aaggataattcatcaactaaacctggtgccatccagcctctctctcgggtgcgacctgct
gtgtctccagccagtcaggatggccacagcagtcccaaccctttccagcatggcctttct
cccatcaactctcagaccactcctcgtgccccatcccctgacacacatgaggaatacccc
atcaatatcaagcaggtatataaggccttcgcagctgtgccacactccctggccgtactg
gaacccccacaggatctttactctccacggaacaatgtcagcccaatgcaaccatcacca
gagcctgagctgagtaatgaggtgtttatggatgaggctgatggtgagggcaatggtcct
cacaagcctcgtccctccctcttatctgaccgccgcgagtacaggagcctggcggccgtg
ccgcgcctgtctcgcccctcagtggagtcgaagacccccacccccaccaaccttggcaga
gatagcccagagcagcgctccttcagagacaggcagaaatattttgagattgatgtgaag
caacagacaccggacaaacccaaacctcgcatctcacttgtgggagaagatgacttgaag
aaaatgaaagaggaagaagcaaagcgaatggaacagagggcgcaagagtatatgctggat
gaagatgaggaggatgaggaggaagatctggccaagcaggtggcagatatgaaggctcgc
ggaaaggttgtccttgatggtgtggagtacaaggtcgagagcttgggaagccgcagttcc
ccgtctccgaggcaatgtgctacacctcccagccactgtggcagctcaggtccttcctct
gtggatggtaaaggagactctcagcggaattcaatggaagacagcttcagacttgagcag
agacccaactccatgacgggcttgatcccagtttatcccggtgaatctgtggctcccatt
cgaacggccaaagcagagcgtaggcatcaagaccgattacgcatgcagagcccggagctt
gctgtcgccatggacaaggagctgtcgcctgctgaaaaacgagccctggaggcagagaag
agggccatgtggagagcagccaggccttatggtctagaggaggacgtaaggcagtatgag
caagacctggctaagcgactctaccagtcccgtgtgagggcatctctaggcagcgctgca
gcccttcccacttcctgctcctcctcttcctgtcagcccaggatgaagtctctagagcag
gatgctttgaaggctcagatggtcattgccaagtctaaagaggggaagaagcgtggaacg
ttggatcagctgtcagagtcgccgtcccctgcgcccacaccctctccaacaccaatggaa
gatttcagtccacgggcagtgacttcaccaggcagactgtccctgtcagaaaagaagttt
gactaccgacaatttgctgccattccttcttccaaacccgtttacgacattcagtctcct
ggtgcaggtgatgacgtgcgcttcatggatgatgcctccagtaacccagtgtctgttata
gatccagaagttcctgtggccgccacatctgctctagaggagatggctctgtacagtaac
aagcgcaaactacgacagggccgccgcagcctggaggctcctgtgcccacataa
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