Garra rufa (doctor fish): 141331070
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Entry
141331070 CDS
T11039
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
grf Garra rufa (doctor fish)
Pathway
grf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
141331070 (lrrc4cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141331070 (lrrc4cb)
Cell adhesion molecules [BR:
grf04515
]
Immunoglobulin superfamily
NGL family
141331070 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
I-set
LRR_14
Ig_3
ig
LRR_9
V-set
Ig_2
LRRNT
LRR_RPS2
DUF7617
LRRCT
Syndecan
Motif
Other DBs
NCBI-GeneID:
141331070
NCBI-ProteinID:
XP_073692034
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Position
3:32437886..32476003
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AA seq
629 aa
AA seq
DB search
MLNKMTSYHQRQMLRGPRWKGAWFDPLFLLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLKDVPDGVSTNTRYLNLQDNQIQVIKVDSFKHLRHLEILQLSRNHIRNIEIGA
FNGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDL
GELKRLSYISSGAFQGLSNLRYLNLGMCNLKEVPNIQPLIRLDELEMSGNQLTVIQPSSF
KGLVHLQKLWMMHAQVQTIERNSFDDLHSLRELNLAHNNLSFLPHDLFTPLHHLQRVHLH
HNPWNCNCDILWLSWWLRETVPTNTSCCARCNSPPSFKGRYIGELDQSYFQCYAPVIVEP
PADLNLTEGMAAELKCRTNSVTSVSWLTPNGSIITHGALKMRISVQNDGTLNFTNVTIQD
TGTYTCIVTNMLGNISASAVLNVTSVDNSGFSYFTTVTVETIETSIDGESRTPVQPSFGW
ASSSTTRGTPIATERAYTIPVTDIDIDGALNGLEEVMKTTKIIIGCFVAITLMAAVMLII
FYKMRKQHHQQDHDGPARTIEIINVHEELTRVPAMESHLTLPPLEHEHYNHYNSYKYNHV
SALSSLHSSVHEPLLIQASSKDNVQETQI
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacctcttaccatcagcgccagatgttgagaggtcctagatggaaa
ggggcttggtttgaccccttatttctcctgcttttagccctgcagttgcttgtcgtcgct
ggattggtacgagcacaaacctgcccgtccgtatgttcctgcagtaatcagtttagtaag
gtcatctgcacacgcagaggtctgaaggatgtccctgacggcgtctccaccaacacacgg
tatctaaaccttcaggacaatcagatccaggtcatcaaagtagacagtttcaagcatctg
cgacaccttgagattcttcagcttagcagaaaccacatccgcaacatcgagatcggcgcc
ttcaacgggctgaccagccttaacactctggagctttttgacaatcgcctcacgaccatc
ccaaatggcgcctttgagtatctatcaaaactgaaagagctttggcttaggaataaccct
attgagagcataccgtctgatgccttcagtcgcttgccctctctacggcggttggacttg
ggagagctgaagcggctctcctacatttcaagcggagcatttcagggcttgagtaatctt
cgctacctgaatctgggcatgtgtaacctcaaagaggtccccaatattcagcccttgatt
cgcttggacgagctggagatgtctgggaaccagctcaccgtcattcagcccagttctttt
aagggtctcgtccatcttcagaagctgtggatgatgcatgcccaagtccaaaccatagag
cggaactccttcgacgacctgcactctttgcgagagctcaacctggctcacaacaacctt
tcctttttgccccatgatctcttcacgcctttgcaccacctgcagcgagtgcatttgcat
cacaatccctggaactgcaactgtgacatcctttggctgagctggtggctgagagagacc
gttccgacgaacaccagctgctgcgcccgctgcaattcccctcccagctttaaggggcgc
tacatcggcgagctagatcagagctactttcagtgctacgcgcccgttatcgtcgagccg
cctgccgacctcaatttgactgaaggaatggcggcagagctcaaatgtcggacgaattca
gtgacctcggtcagctggctaacaccaaatggctccatcataacgcatggggcactcaag
atgcgcatctctgtccaaaacgacggaacgttaaacttcaccaacgtcaccatccaggac
acgggaacctacacttgcatcgtgaccaacatgctaggcaacatttcagcctctgctgtc
cttaatgtgacgtctgttgacaacagcggctttagttacttcactacggtcactgtagag
acaattgaaacctctatcgatggggagagtaggacacctgtgcagccttctttcggctgg
gcgtcctcctcaaccacaaggggaacacctattgccaccgagagagcgtacaccattccc
gtgactgacatagacattgacggcgctctcaatggtttggaggaggtgatgaaaaccacc
aagatcattattggctgctttgttgccatcacgctcatggcggccgtcatgctcataata
ttctacaagatgcgcaagcagcaccaccagcaggatcacgatgggccggcccgcaccatc
gagatcatcaatgtacacgaggagctgacgagggttccggccatggagagtcacctgact
cttcctcctctggagcatgagcattacaaccactataactcgtacaaatataaccatgtg
tccgctctcagctcgctgcatagttcagtgcatgaacctttactaatccaagccagctca
aaggataacgtgcaggagacacaaatttaa
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