Garra rufa (doctor fish): 141331121
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Entry
141331121 CDS
T11039
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
grf Garra rufa (doctor fish)
Pathway
grf04136
Autophagy - other
grf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141331121 (atg13)
04136 Autophagy - other
141331121 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141331121 (atg13)
03029 Mitochondrial biogenesis [BR:
grf03029
]
141331121 (atg13)
Membrane trafficking [BR:
grf04131
]
Autophagy
Autophagosome formation proteins
ULK complex
141331121 (atg13)
Atg1 complex
141331121 (atg13)
Mitochondrial biogenesis [BR:
grf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
141331121 (atg13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
141331121
NCBI-ProteinID:
XP_073692120
LinkDB
All DBs
Position
3:35652661..35664564
Genome browser
AA seq
536 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKITTCSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGDVQLTGLGEGFQTVRVGIVGTPI
GTITLSCAYRTNLALMSSRQFERTGPIMGIIIDHFVERPFTNMAHMHPCSYRAPGEDDGG
TYAGIEDSQEVCTTSFSTSPPSQCVCTVSQAHFKTPKPAVMATLKVPFMGLGISQQLYSS
RLSYQTPGLGAVDLCHPTACTAAAHPHQMVMPGKEGGVPQVPAQPSHGTAAEHGRIQSCP
TGQSPQPAPPTSCNIEVKTVSPSGALETTFTRKVGAFVNKTTTQVTTTSLDLPFAAFAPR
AYDLEENDPMVHPPLSPAHSSPLQGSLHSNSSSQSAGQPQDDFVMVDFKPAFSKDDLLPM
DLGTFYREFQNPPQLASLSIDVSAQSMAEDLDSLPEKLAIYEKNIDEFDAFVDTLQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgatctgagcccacaggacaagaaagacttggataaattcatcaaattcttt
gccttgaagacagtgcaggttatagttcaagcccggcttggagagaagatcaccacttgc
tcatcttcatcaccgacaggttcggactggtttaacctggcaataaaagacatcccagag
gtgactcatgaagcaaaaaaagctcttgctggacagctgcctggcatcggccggtccatg
tgtgtggagatctccctcaaaacttcagagggagactcaatggagctggagacgtggtgt
ttggaaatgaatgaaaagtgtgataaggacattaaagtgtcctatacagtttataatcgg
ctgtctctcctacttaagtctttgctggccatcacaagggtgacacctgcttacaagctt
tcacgtaaacaagggcatgattatgtcatactctacaggatctattttggagacgtccag
ctgacgggtctcggggaagggttccagacagtgcgagtgggtattgtaggcactcccata
ggcaccatcactttgtcctgtgcatatcgcactaatttggccctcatgtcttcaaggcag
tttgagaggacaggcccaatcatgggtatcatcattgatcattttgtggagcgtcccttc
actaatatggcacacatgcatccctgtagttacagagcacctggagaagatgatggagga
acttatgcaggaatagaagactctcaggaggtgtgcaccacatccttttccacctcccca
ccatcacagtgtgtgtgtactgtaagtcaggcacattttaagacacctaagccggctgtg
atggccacactgaaggttcccttcatggggcttggcatctcacagcaactgtacagctct
cgtctatcatatcagactccgggcctgggagctgtggatttgtgccatcctacagcttgc
actgctgctgcacatcctcaccagatggttatgccaggtaaagaaggtggagtcccacag
gtgccggctcagcctagtcatggcactgcagctgagcatggtcgtatacaatcatgcccc
actggacagtcccctcagccggcaccacccacatcttgtaatatcgaggtgaagactgtg
tccccctctggtgctctagagaccaccttcactaggaaagttggagcttttgtcaacaaa
accaccactcaggtgacaacaaccagtctggatcttccttttgctgcatttgctccaaga
gcctatgacctggaggagaatgacccaatggtgcaccctcctctgtctccggctcattcg
tctcccttgcaaggcagcctgcattcaaacagctcaagccagagtgcagggcagccacaa
gatgactttgtcatggttgacttcaaaccagcattctctaaggatgaccttttgccaatg
gatcttggaactttctacagagagtttcaaaaccctcctcaacttgcaagcctgtccatc
gatgtcagcgcacagtctatggctgaggatttggactctcttccagagaaactggccatt
tatgagaagaacattgatgagtttgatgcatttgtggacacgctacaatag
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