Garra rufa (doctor fish): 141331145
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Entry
141331145 CDS
T11039
Symbol
tent4b
Name
(RefSeq) terminal nucleotidyltransferase 4B
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141331145 (tent4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141331145 (tent4b)
03016 Transfer RNA biogenesis [BR:
grf03016
]
141331145 (tent4b)
Enzymes [BR:
grf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
141331145 (tent4b)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
141331145 (tent4b)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
141331145 (tent4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
Motif
Other DBs
NCBI-GeneID:
141331145
NCBI-ProteinID:
XP_073692160
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All DBs
Position
3:36492322..36535538
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AA seq
660 aa
AA seq
DB search
MDPRIAWFQPEQRGPANNLWMHIWETTQTLGNLYFNNNCNTASAKLTSSSSNSGGGDGAS
SNAADSSGKPKDQQGMSGSKPDSEVSEQQDFIPLEANNNNNSSGRVGRGVGGGGQVGGSR
VAGVGTELPSKRKRDNKASTFGFNRSLLLTDGAEDIYTGTPWKTRNYSEGIVGLHEEIKD
FYEFISPRPEEEHMRLEVVARIHRVIKDLWPNAEVEVFGSFSTGLYLPTSDIDLVVFGHW
ETLPLWTLEEALRKRKIADENSVKVLDKATVPIIKLTDLHTEVKVDISFNVQNGVKAANL
IKDFKQQFPVLPYLVLVLKQFLLQRELNEVFTGGIGSYSLFLMVVSFLQLHYREDACSSN
PNLGVLLIEFFELYGRHFNYLKTGIRIKDGGSYLAKDEVQKGMLDGYRPSMLYIEDPLQP
ENDVGRSSYGAMQVKEAFDYAYVVLSHAVSPIAKYYPNNKAESILGRIIRVTQEVAEYRD
WISAQWGQRSNNEPVLNCNANDVTLLVESEKLDECNNNFSEDSAMLPTVPRSKMSSNSSS
PSPSSPSSPSSSSPSSTASSSSDADSDGTPYKTSKALGGRGSNSYSENTGRNLSNHRSQN
HSATVPTPTNKGNKSRQLANKSAQGQHNNPNKIQQNSKSQKSNMKKRKPQREVAHEDLCR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggatcctagaatcgcctggtttcagccagaacagcgcggacctgccaacaacctgtgg
atgcacatctgggaaacgacacagactctgggaaacctctacttcaacaacaactgcaac
acagccagcgccaaactgacgagtagcagtagcaacagcggcggcggtgacggtgcgtcg
agcaacgcggccgacagcagcggcaagcccaaggatcagcaggggatgtctggatccaaa
cccgatagtgaggtgtccgaacaacaagactttatccctctggaagccaataacaacaat
aacagcagcggtagggtaggcaggggtgtcggcggaggggggcaagtgggtggcagtagg
gtcgcaggagtgggaacggagttgccaagcaagagaaaaagagacaacaaggcgagcacc
tttggctttaacaggagtctcctgctgacagatggggcggaggacatttacacgggcacc
ccgtggaagaccagaaactactcggagggcattgtggggctgcatgaggagataaaggac
ttttatgagttcatttctcctcgtccagaggaggagcacatgaggttagaggtggtggcc
aggattcatagagtcatcaaggacttgtggcccaatgccgaggttgaggtgtttggcagc
ttcagcacaggcttgtatttgcctacaagtgatatagaccttgtggtttttggtcactgg
gagactttacctctatggactctggaagaggcgctccgcaagagaaaaattgcagatgaa
aactctgtcaaagtcctggacaaagcaacggtccccatcattaaactgacagacttgcac
acagaggtaaaagtggacatcagctttaacgtacagaatggtgttaaagctgcaaacctc
atcaaggactttaaacagcaatttcctgtgttaccatacctggtgctggttttgaagcag
tttctactgcaaagagagctgaatgaggtttttacaggaggaattggatcatacagtctg
ttcctcatggttgtcagcttcttacagctgcactacagagaggacgcatgtagttcaaac
ccaaacctgggtgtactgctgattgagtttttcgagctgtacggacggcattttaactac
ctgaagacgggcatcaggatcaaagacggtggctcatacctggccaaggatgaagtgcag
aaaggcatgctggatgggtacagaccctctatgctttacattgaggatcctttgcagcca
gaaaatgatgttgggcgaagttcatatggggcgatgcaggtgaaagaggcttttgattac
gcttacgttgtcttaagtcatgctgtgtccccaattgccaagtactatcccaacaacaag
gcagagagtattctaggtagaataatccgcgtcacacaggaagtagcagagtaccgtgac
tggatcagtgcgcagtggggccagaggagcaacaatgagccggtgctcaactgtaatgca
aatgatgtcacgctgctagtcgagtctgagaagcttgacgagtgtaataataacttttca
gaagatagtgcgatgcttcccactgttccccggagcaaaatgtcatcaaactcctcctct
ccttccccctcttccccttcatcaccatcatcgtcttcaccatcttcaactgcctctagc
tcaagtgatgcggactctgatggaacgccctataaaacttccaaagctttgggtggccgt
ggctctaactcatacagtgagaatacaggaaggaatctgtccaatcacaggtcacaaaat
cattcagcaacagtgcccactcccactaataagggcaataagagtcgacagcttgccaac
aaaagtgctcaagggcagcacaacaaccccaacaagatccagcaaaacagcaagtcccaa
aaatccaacatgaagaagaggaaacctcagcgtgaggtagcgcatgaggacctgtgtaga
tag
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