Garra rufa (doctor fish): 141331391
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Entry
141331391 CDS
T11039
Symbol
clpxa
Name
(RefSeq) caseinolytic mitochondrial matrix peptidase chaperone subunit Xa
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
grf03110
]
141331391 (clpxa)
Chaperones and folding catalysts [BR:
grf03110
]
Heat shock proteins
HSP100
141331391 (clpxa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Zn_ribbon_CLPX_N
AAA
ClpB_D2-small
AAA_5
Mg_chelatase
AAA_14
Sigma54_activat
AAA_22
AAA_7
IstB_IS21
Sigma54_activ_2
AAA_16
NACHT
RuvB_N
nSTAND3
ABC_tran
Lar_restr_allev
TsaE
DEAD
AAA_18
AAA_28
ResIII
AAA_23
T2SSE
Motif
Other DBs
NCBI-GeneID:
141331391
NCBI-ProteinID:
XP_073692537
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Position
3:complement(57244329..57260551)
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AA seq
624 aa
AA seq
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MSCTCASAARKLINSAHKGISGSRVQLLSLSRLGTREVRLARRIPVRSFSETTVYFASKD
GMKDGDGGKKSVGEGSGKRTSSNNSGKGGSQLRCPKCGDPCTHVETFVSSTRFVKCEKCH
HFFVVLSETDTKKSLSKDPESAAEAVKLAFQQKPPPPPKKIYAYLDKYVVGQDHAKKVLA
VAVYNHYKRIYNNMPAGSRQQQVEVEKQASLTPRELELRRREDEYRFTKLLQIAGISPHG
NALGASMQQQLNQQAPPEKRGGEVLDSTHTDIKLEKSNIVLLGPTGSGKTLLAQTLAKCL
DVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYVIEKAQQGIVFLDEVDKIGSVPGIH
QLRDVGGEGVQQGLLKLLEGTIVNVPEKNTRKLRGETVQVDTTNILFVASGAFNGLDRII
SRRKNEKXXXXXXXSNMGKGRRAAAAADLANTTGGEVDAVAEIEEKDRLLKHVEARDLIE
FGMIPEFVGRLPVVVPLHSLDEETLVRILTEPRNAVVPQYQALFSMDKCDLNVSPDALRA
IARFALERKTGARGLRSIMEKLLLDPMFEVPNSDIVAVEVNKEVVEGKAPPQYIRAPAKD
SSEEEYDSGVEEENWTRQVDAAKN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtacatgtgcttcagcagcgagaaaactcataaattccgctcataaaggaata
tccggctccagagtccagttgctgtcactgagccgcctggggactcgtgaggttcggctg
gcacgccgtatccccgtgaggtcgttctcagagaccactgtgtattttgcttcaaaagat
gggatgaaagatggagatggtggaaagaaatctgttggtgaaggaagtggaaaaagaacc
agctctaataattccggcaaaggaggaagtcagctgaggtgccccaaatgtggagatcct
tgcacacatgtagaaacatttgtttcatcaactcgatttgtgaaatgtgaaaaatgccac
cacttttttgtggtgctttcagaaactgacactaagaagagtttgagtaaagacccagag
tctgcagcagaagctgtcaaattggctttccagcagaaacctcctccaccacctaaaaag
atctatgcttatcttgataagtatgttgtgggtcaggatcatgctaagaaggttcttgca
gtggccgtgtacaatcattataaacgcatctacaacaacatgccggcaggctccaggcag
cagcaggtggaggtggagaaacaggcctccctcactcctcgagagctagagctaagacga
cgggaggatgaatacaggtttacaaagctgctgcagatcgcagggatcagtcctcatgga
aacgctctgggtgcctccatgcagcagcagctaaaccagcaagcacctccagagaagaga
ggaggagaagtactggactccacacacaccgacattaaactggagaagagcaacatagtg
ctgctgggccccaccggctcagggaaaacacttctggcacaaaccctggccaaatgcctg
gatgttccctttgcaatctgtgactgcaccacgctcactcaggcagggtacgtgggagag
gacatagaatcagtcatcgcaaaactactgcaggatgccaactatgtgatcgagaaagca
caacaaggtatcgtgtttttggacgaagtagacaagataggtagcgttcctgggatccat
cagttgagagacgtgggaggagagggagtgcagcagggtttgctgaagctactggaaggc
actattgttaatgttcctgagaagaacacaaggaagctgagaggtgaaactgtccaagtt
gacaccaccaacatcctgtttgtagcatctggagcgtttaatggccttgatcgtatcatc
agcagaagaaagaatgagaagnnnnnnnnnnnnnnnnnnnnatctaacatggggaaaggt
cgaagggcggcagcagcagctgacctggcaaacaccacgggtggagaggtggacgcggtg
gcagagatcgaggagaaggaccggcttctgaaacacgtggaagccagagacctcattgaa
ttcggcatgattcctgagtttgtgggccgtcttcctgttgtggttccactgcacagtctg
gatgaggagacactggtgcgcatcctcacagagccacgcaatgctgttgtgcctcagtat
caggctctcttcagtatggacaagtgtgatctcaacgtgtcacctgatgccctgagagcg
attgcgagatttgctctggaacgtaaaactggtgcccgtgggcttagatccataatggaa
aaactgctgctagatccaatgtttgaggtgccaaattcggatattgtggctgtggaagtg
aacaaggaagtggttgaaggaaaagcaccgcctcagtacattcgagctccagctaaagac
tcctctgaggaggaatacgactctggagtcgaagaggaaaactggacaagacaggttgat
gctgccaaaaactaa
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