Garra rufa (doctor fish): 141331464
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Entry
141331464 CDS
T11039
Symbol
dctn1a
Name
(RefSeq) dynactin subunit 1a isoform X1
KO
K04648
dynactin 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04814
Motor proteins
grf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
141331464 (dctn1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
141331464 (dctn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141331464 (dctn1a)
03036 Chromosome and associated proteins [BR:
grf03036
]
141331464 (dctn1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141331464 (dctn1a)
Membrane trafficking [BR:
grf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
141331464 (dctn1a)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
141331464 (dctn1a)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
141331464 (dctn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
IFT57
Baculo_PEP_C
Gemin7
RTBV_P46
Filament
Motif
Other DBs
NCBI-GeneID:
141331464
NCBI-ProteinID:
XP_073692618
LinkDB
All DBs
Position
3:complement(65603330..65651132)
Genome browser
AA seq
1231 aa
AA seq
DB search
MSSDGGGKPAKVGSLVEVIGKGQRGTVAYIGATLFASGKWVGVILDEPKGKNDGTVQGKR
YFTCEENHGIFVRQSQIQLIDEGGSSATSPETPDSGVSKLLKKEVQETPKAVKQTPTAKK
PPMRRSTKAGRPSVGGSALQESVLAENESTASSQIALGAPVVPQPSGAPSAPPPATPSKE
EESLRAQVKDLEEKLETLRMKRSEDKAKLKEMEKYKIQLEQLQEWKNKMQEQQNDLQKQL
KEAKKEAREALEAKDRYMEEMADTADAIEMATLDKEMAEERAESLQQEVESLKEKVEELT
MDLEILKHEIEEKGSDGAASSYHVKQLEEQNGRLKEALVRMRDLSSSEKQEHVKLQKQME
KKNTELETLRAQKEKLQEEMKQAEATIDELKEQVDAALGAEEMVETLTERNLDLEEKVRE
LRETVSDLEAINEMNDELQENSRETELELREQLDLAGARVREAQKRVEAAQETVADYQQT
ISKYRELTTHLQEVNRELTNQQSSSAEQLQQPATELFDFKIKFAETKAYAKAIEMELRKM
EVNQANRQVSLLTSFMPESFLRHGGDHDCILVLLLIPRLICKAELISRQAQEKFDLNGGS
VERTGLRGAAGEQLSFASGLVYSLTLLQATLHKYELALSQCGVEVYKRMGTLYSEMSVHE
RSLDFLIDLLHKDQLDETVQVEPLTKAIKYYQQLYSVHLSDQPEDCTMQLADHIKFTQSA
LDCMGSEVGRLRAFLQAGQEGAELCVLLKDLDTSCGDIRQFCKKIRRRMPGTDAPGIPAA
LTFPPQVGETLADCRKQLTRVVAVLQEVAAAGAQMIAPLAEPEGLTPLKIEDVMFKAVDQ
VYGTQGLNAYECLRQTCAGVIATMNKMATAMQEGEYDAERPQRPHPPVEIRAAAVRAEMT
DAEGLGNKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDTSTKDADERVEKIQT
KLDDALSLLKKKEKEFEETMDALQADIDQLESEKAELKQRINNQSRAGEGLRGPQASGIA
SIVTGTAAGGMSAGVAGVPGVVQVVDSPLLKQQIDVQRLAIKQLKSENYRLKAEKMRAQL
SSLPPLQPANMTEVMKEAPAGSLYRRTDLLLNNLLKMSASLRVVDITGKTTASASSQLLE
QTARMKSLSDALDKLKAEVCQHVVSQQPGARVPSDFATFPSASFVKARAEQKSGSVLVGK
VMIPCARGAEQTHSLVLSQQQLQRVHRLLMT
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagacggaggcggtaagccggccaaggtgggctcgctggtggaggtcatcggt
aaagggcagcgggggaccgtggcgtatatcggcgccaccctgttcgcctctgggaaatgg
gtgggtgtgattctggacgaacccaaagggaagaatgacggaacggtgcagggaaaacgt
tacttcacctgtgaggagaatcatgggatattcgtcagacagtctcagattcagctcatc
gatgaagggggcagctctgccacgtctccagaaacacctgactcaggtgtgtccaaactg
ctcaagaaagaagtccaggagacaccaaaagctgttaagcagactccaacagcaaagaag
cctcctatgcgccgtagtaccaaggccggccgtccctctgttggaggttcagcacttcag
gaatctgtgttggcagagaatgagtccacagcgtcttcccagattgcactgggagctcct
gtggtgccacaacccagcggcgcacccagtgcaccacctcctgctactccaagcaaggag
gaggagagtctccgggctcaagtgaaggatctggaggagaagttggagacgctgcggatg
aagcgctcggaggataaagccaaactgaaggagatggagaagtacaagatccagctggag
cagctgcaggagtggaagaacaagatgcaggagcagcagaacgacctgcagaagcagctc
aaagaggccaagaaggaggcgcgtgaggctctggaggccaaagaccgatacatggaggag
atggcagacactgcagacgccatcgagatggccacgctggacaaagagatggcggaggag
cgggccgagtctctgcagcaggaggtggagagtctgaaggagaaggtggaggagctgacc
atggacctggagatcctcaaacacgagatcgaggagaagggttcagacggagcggcgtcc
agttaccacgtcaaacagctggaggagcagaacggacgtctgaaggaagctctggtcagg
atgagggatttgtcgtcgtctgagaagcaggagcatgtgaagctccagaagcagatggag
aagaagaacaccgagctggagactctgagagcgcagaaggagaagctgcaggaggagatg
aagcaggctgaagccaccatagatgagctcaaggagcaggtggatgctgctttaggagcg
gaggagatggtggagacgctgacggagagaaatttagacctggaagagaaagtgcgagaa
ctcagagagaccgtcagcgacctggaagcgataaacgagatgaatgacgagctgcaggag
aactcgcgtgagacggagctggagctgcgtgagcagctggatctggccggagctcgagtc
cgagaggctcagaaaagagtggaagcggcgcaggagacggtggccgactatcagcagacc
atcagcaaatacagagagctcaccactcacctgcaggaagtgaaccgagagctgaccaat
cagcagagcagctccgctgagcagctgcagcagccggcgactgaactcttcgacttcaag
atcaagtttgcagagaccaaagcttacgctaaggccatcgagatggagctccgcaagatg
gaggtgaatcaagcgaaccgtcaggtgtctctgctgacgtccttcatgcccgagtccttc
ctgagacacggaggagaccacgactgcatcctagtgctgctcctcatccccagactcatc
tgcaaggcggagctgatcagcagacaggcgcaggagaagtttgatctgaatggtggttcg
gtggagcgcactggactgcgaggagccgccggagagcagttgagctttgcatccggtctg
gtttattctctgacgctgctgcaggccacgctgcacaaatatgagctagctctgagtcag
tgcggtgtggaggtgtataagcgcatggggacgctgtactccgagatgagcgttcacgag
cgatcgctggacttcctcatcgatctgcttcataaagatcagctggatgagactgtgcag
gtggagccgctcaccaaagccatcaaatactaccagcaactgtacagcgttcatctgtcg
gatcagcctgaggactgcaccatgcagctggccgaccacatcaagttcacccagagcgct
ctggactgcatggggtcagaggtcggccgtctgcgggccttcctgcaggctggacaggaa
ggagcggaactctgtgtgctcctgaaggacctggacacttcctgtggagacattcgccag
ttctgcaagaagatccgcaggaggatgccgggaacggacgcaccggggattcctgccgcg
ctcaccttccctcctcaggtgggtgagacgctggcggactgcaggaagcagctgacgcgt
gtggtggcggttctacaggaagtagcggcggcaggagctcagatgatcgcgccgctggcc
gagccggagggactgacgccacttaaaatcgaagatgtgatgtttaaagcagtggatcag
gtgtacggcactcaaggactcaatgcatacgagtgtctacgtcagacctgcgccggcgtc
atcgccaccatgaacaagatggccaccgccatgcaggagggagaatatgacgcagaaaga
ccacagcgtccgcatccgccggtggagatccgcgccgccgccgtcagagcagagatgacc
gacgcagagggtctgggtaataaactggaggaccgggagactgtcatcaaagagctgaaa
aaatcactcaaaatcaagggcgaggagttgagcgaggccaatgttcgtctgagtttgctg
gagaagaagctggacacgtcgaccaaagacgcagatgagcgtgtggagaagatccagacc
aaactagatgatgctctcagtctgctgaagaagaaagagaaggagtttgaggagaccatg
gatgcactgcaggctgacatcgatcagctggagtcagagaaggcggagctgaagcagagg
atcaacaaccaatcacgagccggcgaaggtttgcgtggaccgcaagcatctggaatcgcc
tctatcgtcacgggaaccgctgcgggaggaatgtcagcaggtgtagccggtgtcccaggt
gtggttcaggtggtggactctcctctcctcaaacaacagatcgacgtgcagcgactcgcc
atcaaacagctgaagagtgaaaactacagactgaaggctgagaagatgcgagcgcagctg
tcgtctctgccgccgctgcagccggccaacatgacggaggtgatgaaggaggctccggcg
ggatctctgtaccgcagaactgacctgctgctcaacaacctgctgaagatgagcgccagc
ctgagagtcgtcgacatcaccggaaaaaccacagcgagtgcaagttctcagctgctggaa
cagacggccagaatgaagtctctgagcgacgctctggataaactgaaggctgaagtgtgt
cagcacgtcgtgtctcagcagcctggagctcgtgtgccgtccgacttcgccaccttcccc
tccgcctccttcgtcaaggcccgagcggagcagaagagcggctcggtgctggtggggaag
gtgatgattccctgcgctcgcggagcggagcagacgcacagcctggtcctgtcccagcag
cagctgcagcgcgtccatcgcctgctcatgacgtaa
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