Garra rufa (doctor fish): 141331478
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Entry
141331478 CDS
T11039
Name
(RefSeq) transducin-like enhancer protein 3-B
KO
K04497
groucho
Organism
grf Garra rufa (doctor fish)
Pathway
grf04310
Wnt signaling pathway
grf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
141331478
04330 Notch signaling pathway
141331478
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141331478
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
141331478
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TLE_N
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_WDR5
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_WDHD1_1st
WDR55
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
CFAP251_N
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
DSE1_N
Beta-prop_Aladin
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_VPS8
Beta-prop_NOL10_N
Beta-prop_DCAF4
ASA1
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_ACSF4
Beta-prop_NUP159_NUP214
Beta-prop_WDR41
Beta-prop_RIG_2nd
HALZ
Beta-prop_IP5PC_F
WD40_RFWD3
TP_0598_N
Motif
Other DBs
NCBI-GeneID:
141331478
NCBI-ProteinID:
XP_073692642
LinkDB
All DBs
Position
3:67816210..67852431
Genome browser
AA seq
772 aa
AA seq
DB search
MYPQGRHPAPHQPGQPGFKFTVAESCDRIKDEFQFLQAQYHSLKVEYDKLANEKTEMQRH
YVMYYEMSYGLNIEMHKQTEIAKRLNAILAQIMPFLSQEHQQQVAQAVERAKQVTMTELN
AIIGVRGLPNLPLTQQQLQAQHLSHAAHGPPVQLPPHPSGLQPPGIPPVTGSGSGLLALG
ALGSQAHLPVKDEKNHHDLEHRERESSTNNSVSPSDSLRASEKHRGSSEYSLDPKKRRVE
EKDNMSRYDSDGDKSDDLVVDVSNEDPATPRVSPSHSPPENGLDKARALKKDAPNSPASV
ASSGSTPSSKVKDHPHNDKSSTPGLKSNTPTPRNDAPTPGTSNTPGLRPIPGKPPGMEAL
TAPALRTPLSIAAPYGAPFAMMGHHPEMNGSLTSPGVYPGLHISPQMSAAAAAAYGRSPM
AGFDPHPHMRAPGLPASLTSIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQI
NTLSHGEVVCAVTISNPTRHVYTGGKGCVKIWDISQPGSKSPVSQLDCLNRDNYIRSCKL
LPDGRTLIVGGEASTLTIWDLASQTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNI
AVWDLHNQTLVRQFQGHTDGASCIDISHDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTS
QIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLSLKFAYCGKWFVSTGK
DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgcagggccggcatccggcacctcaccagcctggtcagccaggctttaaattc
actgtagcagaatcttgtgacaggatcaaagatgaattccagttccttcaagctcagtac
cacagtcttaaagtggagtatgacaaactggccaatgagaagacagagatgcagcgacat
tatgtcatgtattatgagatgtcctatgggctgaacattgaaatgcataaacagactgag
attgccaaacggctaaatgcaattcttgctcaaatcatgccttttttgtcacaagagcac
caacagcaggttgcacaggctgttgaacgtgctaagcaagtgacaatgacagagttgaat
gccatcatcggggtacgtggacttcccaatctgcctctcacccagcagcagctccaggct
caacacctttctcacgctgcccacggacccccggtccaactgccccctcacccctcgggg
ctgcagcccccaggcatccctccagtcacaggctcagggtcaggactgctggcgctggga
gctctaggcagccaggcgcacctgcccgtcaaagatgagaagaaccatcatgatctggag
cacagagagcgggaatctagcacgaataattcagtatcaccatcagacagcctgagggcc
agtgagaaacacagaggctcatctgaatacagtctggacccaaagaaacgcagagtggag
gagaaggacaacatgagccgatatgacagtgatggcgacaaaagtgacgatctggtcgtg
gatgtgtccaacgaggatccagccactccaagggtcagcccgtctcactctcctccagag
aatggacttgataaggccagagcactgaagaaagatgcccccaacagcccggcttctgtg
gcctcctctgggagcaccccttcttctaaagtgaaggaccacccacataacgacaagtcc
tccaccccaggtttaaagtccaacacccccaccccacgcaacgacgctcccaccccaggt
accagcaacacccctgggctcaggcccatacccggaaaaccacctggcatggaagcactg
acggcacctgccctacgcacaccattgtcgattgcggcgccatatggggctccgttcgcc
atgatgggtcaccacccagagatgaatggctccttgaccagtccaggtgtttaccctggc
ctacacatctcccctcagatgagtgccgcagccgctgccgcctatggacgctcgcctatg
gcgggctttgatcctcatccccacatgcgtgcccccggtctgccagcaagtctgacctcc
atacctggaggaaaaccggcctactcctttcacgtcagtgcggatggacagatgcaacca
gtaccttttcctccagatgctctgattggtccaggcattccccgtcacgcccgtcagata
aacacactcagccatggtgaggtggtgtgtgccgtaaccatcagcaaccccacgcggcac
gtctataccggcggcaaaggctgcgtgaagatctgggacatcagtcagcccggcagcaag
agccccgtctcgcaactcgactgtctgaacagggataactatatccgttcctgtaagctg
cttccggatggccgtactttgatcgttggaggggaagccagcactctgaccatatgggat
ttggcctctcagactccccgtatcaaagccgagctcacctcttctgctccggcctgctat
gcgctggcgatcagccctgacgccaaggtctgcttctcctgctgcagtgatggaaacatt
gctgtctgggatcttcataaccaaacccttgtcaggcagttccagggccacacagatggt
gcaagttgtatagatatttcccatgatggcaccaaactctggacaggtggactggacaac
acagtacggtcctgggacctgagagagggacggcagcttcagcaacatgactttacttca
cagatcttctctttgggctactgtccgacgggcgagtggcttgctgtgggtatggaaagc
agtaacgtggaggtgcttcatcacaccaagcctgacaagtaccagctgcacctgcatgag
agctgtgtcctctccctcaaatttgcctactgtggtaaatggtttgtgagcactgggaag
gacaatctcttgaatgcctggaggactccctatggtgccagcattttccagtcaaaggag
tcgtcctccgtcctgagctgtgacatctcggctgatgataagtacattgtgacgggatcc
ggagacaagaaggccactgtgtatgaagtgatctactaa
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