Garra rufa (doctor fish): 141331513
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Entry
141331513 CDS
T11039
Name
(RefSeq) neogenin-like
KO
K06766
neogenin
Organism
grf Garra rufa (doctor fish)
Pathway
grf04350
TGF-beta signaling pathway
grf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
141331513
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
141331513
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141331513
Cell adhesion molecules [BR:
grf04515
]
Immunoglobulin superfamily
DCC/UNC5 family
141331513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
Pur_ac_phosph_N
I-set
Ig_DSCAM-DSCAML_C
Ig_3
ig
Interfer-bind
Fn3_VIN3
NDNF
Ig_2
Tissue_fac
V-set
GH101_dom-5
F5_F8_type_C
TMEM154
Arylsulfotran_N
EphA2_TM
DUF4834
Motif
Other DBs
NCBI-GeneID:
141331513
NCBI-ProteinID:
XP_073692673
LinkDB
All DBs
Position
3:16845490..16918499
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AA seq
1260 aa
AA seq
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MVEVGWSFSEHKTFELLALMQVLWSGVCNGHCQAALSGLQSAVPFAELSFYRLQILETIL
LLYLLLWPLSSSFKLLIPCPASHKGRFEVLGGGSLQIFNLTEEDAGVYSCMADNVNGSTE
AQTELTLKASPQFLKKPASIYAHEATDIIFECEVIGSPAPTIKWVKNGDAVIPSDYFKII
KEQNLQVLGLVKSDEGFYQCLAENDAGNVQSSAQLIILDQDVAIPSPPPTSLTHATTDRL
MPGSRGSAGPTPSAPRDVVASLVSTRFIKLTWRLPAEPHGDDVSYSVYYSLEGNNRERIV
NTSRPGEMQVTIQNLMPDTKYSFRVVAHNRNGPGESSAPLRVATQPEVQVPGPAPNLLAV
VTSPSTVSLSWDMPLIGNGEIQNYKIYYMEKGMDSEQDLDVNTLSHTMTGLKKFTEYSFR
VVAYNKHGPGVSTEDISVRTYSDVPSAPPQNMTVEVLNSKSIMVRWQPPPADAQNGEITG
YKIRYRKGTRKSEAAEITSGSQLYQLIDGLQRGTEYMLRVSAITVNGTGPATDWTTAETF
ESDLDETTVPDVPSSLHVRPLVNSIVVSWTPPENQDIVVRGYTIAYGIGSPHAQTIKVDY
KQRYYTIENLNPSSHYVITLKAFNNVGEGIPVYESAITRPQSDPIDPDVDLYELFHAPYT
PVPDPLPMLPPVGVQASVLSHDTIKVTWADNSLPKNQKITDARYYTVRWKTNIPANTKFK
VANTTTLTHTVTGLKPNTLYEFSVMVTKGRRTSTWSMTAHGTTFETIPSSAPKDVTVVSK
EGRPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDWVIEPVVGNRLTHQIQELTLDT
AYYFKIQARNSKGMGPMSDAVQFRTPKAESSDKMANDQAPGMAVKPGRPSSPEQGFGSVG
KTDMSSTGDNHILIIVIIVSVGAFTIILVVVGAFLCTRRTTTQQKKKRAACKSANGSHKY
KGNSKDLKPPDLWIHHERLELKPIDKSPEPNPVMTDTPIPRTSQDITPVDGSMDPMLQRR
NSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNHHHHYHLGSLAS
PTRSYLHHQSSTRSIATPISHLDRAESTESVRNTPSVDLHPPSGQPSCTTDLSETDVSYH
SSVAEEEPAFSTPTAHVRPTHPLKSFAVPAIPAHPMYDSAALPSTPLLSQTGPHSVKTAS
IGTLGRTRTPMPVIVPSAPDVSESSRLHEDAGSNYETDELTEEMAHLEGLMKDLNAITTA
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggttgggtggagtttctctgagcacaagacttttgaattacttgctcttatg
caagtcctgtggtctggcgtgtgtaatggacactgtcaggctgccctgtcaggtcttcag
agtgctgttccatttgctgagctgagcttttacagattacagattttggagaccatcctg
cttctctacctcttactgtggccactctcttcttctttcaagctattgattccttgccca
gcatcacacaagggccgttttgaagtgcttggtggaggcagtctgcagatcttcaatctc
actgaggaagacgccggtgtgtacagctgcatggcagacaatgtcaacggatccactgag
gcccagactgagctcacgctgaaagcttccccacagttcctgaagaaaccagcgagcata
tatgctcatgaagccacggacatcatcttcgagtgcgaggtcatcggctcacccgctccc
accatcaaatgggtgaagaacggagatgccgtcattcccagcgactatttcaagatcatt
aaggagcagaacttgcaggtcttagggctggtcaagtcagacgaaggtttctatcagtgt
ttagctgagaacgatgctggcaatgtgcagtcgagtgctcagctcatcatattggatcaa
gatgtagccatcccctcaccccctcccacctcactgacccatgctactactgaccgtcta
atgccaggctccagaggcagcgccggtcccacaccctccgccccacgtgacgttgtggcc
tccctggtctccacccgcttcatcaagctgacctggcgccttcctgctgaaccgcatgga
gatgatgtcagctactcggtctactacagcctggagggcaataacagggagaggatagtg
aacaccagccgtccaggagaaatgcaagtcaccattcagaacctcatgccagacaccaag
tactccttccgcgtggtggcccacaacagaaacggccctggagagagctcagcgcctctg
agggtcgccacccagcctgaagtccaggtacctggtcctgctccaaacctacttgcagtg
gtcacgtcccccagtacagtgagtctcagctgggacatgcccctcataggcaatggcgag
atccaaaactacaaaatctactacatggagaagggcatggacagtgagcaggatctggat
gtgaacacactgtcacacaccatgactggattgaagaagttcacggagtacagtttcaga
gttgtggcctataacaaacatggacctggagtgtccactgaagacatatccgtgcgcaca
tactctgacgtccccagtgctccaccacagaacatgacggttgaagtgctgaactctaag
agcatcatggtcagatggcagcctccaccagcagatgctcaaaacggtgagatcaccggc
tataagatccgctacaggaaggggacgaggaagagcgaggcggccgagattacttcagga
tctcagctctaccagctcatagatggtctgcagcgaggcactgagtatatgttgcgagtg
tcagccattacggtcaacggcacgggtccagccacagattggaccactgctgagacgttt
gagagcgatctggatgagacaactgtgccagacgtcccgagctccttgcatgtgcggcca
cttgtgaacagcattgtagtgagttggacaccccccgagaaccaggacattgtggtgagg
ggttacactatcgcctatgggatcggcagccctcacgcccagaccattaaagtggactac
aaacagagatactacaccattgagaacttgaatcccagctcgcactacgttatcacactg
aaggccttcaacaatgtgggggagggaatccctgtgtatgagagcgccatcacacgaccc
caatcagatcccatagaccctgatgttgatttgtacgaacttttccatgctccatacact
ccagtaccagaccctttacccatgctgcctcctgtgggcgttcaggcgtccgttctgagc
cacgacaccatcaaagtcacctgggctgacaactcgctgcccaagaaccagaagatcaca
gatgcacgctactacacagtgcgctggaagaccaacatacccgcaaataccaagtttaag
gtggctaataccaccacactaactcacacggtgaccggacttaagcccaacaccttgtat
gagttctcggtaatggtgaccaagggccggaggaccagcacctggagcatgactgcacat
ggaacaacttttgaaacaatcccaagttctgcacctaaagatgtgactgtagtgagcaaa
gagggacgaccgcgaaccatcatcgtcaactggcagccaccttcagaagccaatggcaag
atcacaggttacataatttactacagcactgatgtgaacgcagaggttcatgactgggtc
attgagccagtagtggggaacaggctaacccatcagattcaagagctcacccttgatacc
gcttactacttcaagatccaggcacgcaactctaagggaatgggtcccatgtctgatgct
gtccagttccgcactcctaaagccgaatcctctgacaaaatggctaatgaccaagctcca
ggcatggcggtgaaaccaggaagaccctcttcaccagaacaaggttttggatcagttggg
aaaacagatatgtctagcactggtgataaccacatcctgattatcgtcataattgtgtct
gtgggtgcatttaccatcattctggtggtggttggcgccttcctgtgtacacgccgtacc
acaacacagcagaaaaagaaacgtgcagcctgtaagtccgccaatggatcccacaaatat
aagggcaactccaaagatctaaagccaccagacctctggatccaccacgaacgtttggag
ctaaaacccatcgacaaatcgcctgaacccaatccagtcatgaccgacacaccaatcccc
cgaacctcacaagatatcaccccggtggatggctctatggatcctatgctccagagacgt
aactcttaccgtggccacgaatcagaggacagcatgtctacactggcaggccgtcgggga
atgagacctaaaatgatgatgccctttgatgcacaaccccctcagcctgtgattagtgct
caccccatccattccctcgataaccatcaccatcattatcacttgggcagcctggcctcg
ccaacacgcagctatctccaccaccagagcagcacgcggtccatcgccacccccatctct
catctagacagggcagagtccacagagtcagtaaggaacacccctagtgttgacctgcac
cctccgtctgggcagccgtcctgcaccactgacctttcagagacagacgttagctaccac
agctcagtcgctgaggaggagccagcgttcagcacacccacagcacatgttcgtcccaca
cacccactcaagagttttgcagtgcctgccatcccagctcatcccatgtatgactcagca
gcattacccagcactccactgctgtctcagacagggcctcactcagttaaaacagcctct
atcggtacgttgggaaggacgagaactcctatgcctgtcatagttccaagtgcaccggat
gtctcggaaagcagcagactgcatgaagatgcagggagtaattacgagacggacgagttg
acggaggaaatggcccatctggagggcttaatgaaggacctaaacgccatcacgacagcc
tga
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