Garra rufa (doctor fish): 141331740
Help
Entry
141331740 CDS
T11039
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141331740 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141331740 (nup85)
03036 Chromosome and associated proteins [BR:
grf03036
]
141331740 (nup85)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141331740 (nup85)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
141331740 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
P2_Phage_GpR
Motif
Other DBs
NCBI-GeneID:
141331740
NCBI-ProteinID:
XP_073692874
LinkDB
All DBs
Position
1:complement(17989001..18004283)
Genome browser
AA seq
649 aa
AA seq
DB search
MEELDVEPSTTLIPSAGFHQKHLGFEWGPGDLLVYETNYKLQGPRSAGSSFVHIVRKDED
ICSPILRKLFNESHLIFVGLQKIKEDVPSKNKKSQFVSISKNYRSVIRACMEELQQNAVE
TQDGSLASQYGDQVSILLAIELIWNLCEVLFIDAAPAGSLLLHLLDWVRLHKSDVDTRAR
EVLQSDSPTQHQSYWDVVISLVLQGRMDEARQVLSKQASLRVESSSVLKRMDVLLQTMPI
FNPTGTQTLTEFDVKWRHWHEECDRCLQDNTFASNQHLETICKILVGDEDALLEQKELLS
TWYHFLVTRLLFTHPTIKPPDLHYYAQSSMNMFLGPRASPEPLDIILLSAFEFDLHQVIK
DCSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLVLEYASGLFTHHSLWQLAVD
YFDHCPEFGRVYLELQIERVPLDTERKAIKVLRICEDRQMSEQVRSICKIMAKRALRNNR
LGSALSWSIRAKDAAFATLISERFLQDYSNKGSFTDLDLLDNLGPAMLLSDRLTFLGKYR
EFHRLYGENRFSEAAKLLLSLMTAKIAPRNLWMTLLTDALPLLEQKEVIFAVDQTYELMS
CLEELNLGTKVSNQIDQEEDIEYTKTELLRLALARNLAMAIVKEGTIET
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttggatgtagagcccagtaccacgctcattcccagcgctggatttcatcag
aagcatttgggttttgaatggggtcctggagatctgttagtctatgagacaaactacaaa
ctgcaaggtccgaggtctgcaggctcttcattcgtccatatcgtgaggaaagatgaagat
atctgctctccaatcctgcgtaaactctttaatgagtcgcatctgatcttcgtggggctg
cagaaaatcaaagaggacgtgcctagcaagaacaagaagtcacagtttgtgagcatcagt
aagaactacaggtctgtgatcagagcctgtatggaggaactccagcaaaacgcagttgaa
acacaagatggttctttagcgtcacaatatggagatcaggtctctattctcttggcgatt
gagctcatatggaacttgtgtgaggttctgttcattgacgcagcgccagccggatctctg
ttgctccacctgctggattgggtgcgtctgcacaagtcagacgtggacacgagagcgcga
gaggtgctacagagcgacagccccacccaacatcagtcctactgggacgtggtgatcagt
ctagtcctgcagggccgtatggatgaagcccgtcaggtgttgtccaaacaggcgtctctg
cgggtggaaagcagctctgttctcaaacgcatggacgtcctgttacagaccatgcccata
tttaatcctacaggaactcaaacgctgaccgagtttgatgtcaaatggagacactggcat
gaggagtgtgaccgctgtctacaagacaacaccttcgctagtaaccagcacctggagacc
atctgcaagatcctggttggtgatgaagatgcattactggagcagaaagagctcctcagc
acctggtatcactttctggtcactcggctgctcttcactcatcctaccattaaaccgcct
gatctgcactactacgcacaatcgagcatgaacatgttcctgggtccaagggcgtctccg
gagcctctggacatcatcctgctgtcggcctttgagtttgacctgcatcaggtgatcaaa
gactgcagcattgcgctcaataactggtggttcgtggctcatctgacagatctgctggat
cactgcaaactcctgcagtcgcacaacctccattttgggtctaatctgcgtgagtttctg
gttttggagtacgcctccggtctcttcactcatcacagtctgtggcagctggcggtggat
tactttgatcactgtcctgagttcggtcgtgtctatctggagctgcagatcgagagagtc
ccactcgacaccgaacgcaaagccattaaagtcctgcgtatctgtgaggacagacaaatg
agcgaacaggtgcgcagtatctgtaagatcatggctaaaagagctctgaggaacaacaga
ctgggatctgctctgtcctggagcatcagagccaaagatgctgcgttcgctacactcatc
tctgagaggtttcttcaggattacagtaacaaaggctctttcacagatctggatttgctg
gataatctgggtcctgccatgctgctcagtgacagactgacgtttttaggaaagtaccgt
gagtttcacaggctttacggtgagaatcgtttctcagaggcggccaaactcctgctgtcc
ctcatgacggcaaagatcgccccacgcaatctgtggatgacgctgctgaccgacgcactg
ccactgctggagcagaaagaggtgatcttcgcagtggatcagacgtatgagctcatgtcc
tgtctggaggagctaaatttaggaaccaaagtctcaaaccagatagaccaggaggaagat
atcgagtacacaaagacggagctcttgcgactggctctggcccgtaacctcgccatggcc
atcgtgaaagagggaacaatagaaacataa
DBGET
integrated database retrieval system
