Garra rufa (doctor fish): 141331800
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Entry
141331800 CDS
T11039
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
141331800 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
grf01007
]
141331800 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
grf03016
]
141331800 (kars1)
Enzymes [BR:
grf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
141331800 (kars1)
Amino acid related enzymes [BR:
grf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
141331800 (kars1)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
141331800 (kars1)
Prokaryotic type
Other AARSs
141331800 (kars1)
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
141331800
NCBI-ProteinID:
XP_073692932
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Position
3:complement(8340863..8359899)
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AA seq
601 aa
AA seq
DB search
MLTLVRICRLQAFRPQTFALPSLQKLPLLVEGNRFRSGKSELKRRMKAEKKAAEKEAKVK
EHQEQKETNDKSPQNAYGADEETLDPNQYFKIRSQAIQALKGTAEDPYPHKFNVDLSLTE
FIEKYNNLQPGDHLPDVVNLSGRVHAKRASGAKLLFYDLRGEGVKLQVMANSRNYKSEED
FVHINNKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFGLKDKETRFR
QRYLDLILNDYVRQKFVTRAKIITYLRSFLDQLGFLEIETPMMNLIPGGAVAKPFVTHHN
ELNMDLYMRIAPELYHKMLVVGGIDRVYEVGRQFRNEGIDLTHNPEFTTCEFYMAYADYH
DLMEITEKLLSGMVKHITGDYKVTYHPDGPEGQAYEIDFTPPFKRISMTQDLEKELGVKF
PAPDTYDSDETRKFLDDLCVQKEVECPPPRTTARLLDKLVGDFLEVKCINPTFICDHPQI
MSPLAKWHRSQKGLTERFELFVMKKEICNAYTELNDPVRQRELFEQQAKAKAEGDDEAMF
IDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDNKPAPPAEGTS
V
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttgactctggtcagaatatgcaggctgcaagcgttcaggccgcagacgtttgctctc
cccagcttacaaaagctgcctttgcttgttgaaggaaatcgcttcagaagtggcaaaagt
gagctgaaaaggcgcatgaaagctgagaagaaagcggctgagaaagaagccaaggtcaaa
gaacatcaagaacaaaaggagaccaatgacaagtcaccgcaaaatgcatatggggctgat
gaagaaaccttggacccaaatcaatacttcaagatacgttcacaagccattcaagccttg
aagggaacagccgaagatccataccctcacaaattcaatgtggacttgtcactgacagag
ttcattgagaaatataacaaccttcagccaggagaccacttaccagatgttgtcaattta
tcgggtcgtgtccacgccaagagggcttcaggtgccaagctgctgttctatgacctgcga
ggagagggagtcaagctgcaggtcatggccaactccaggaactacaaatcagaagaagat
tttgtgcacatcaacaacaaattaaggcgtggggacatcattggggtccgggggaaccct
ggcaagacaaagaagggcgagttgagcatcatcccgattgagatgactctgttgtctcca
tgtcttcatatgcttccccaccttcactttggcctgaaagacaaggaaaccaggttcaga
cagcggtatctcgacctgattcttaatgactacgtgagacagaagtttgtgacccgcgcc
aagattataacttacctccgcagctttctcgaccagcttgggtttcttgagatcgaaacc
ccaatgatgaacctgatacccggtggtgctgtagctaaaccatttgttactcaccacaat
gagctcaatatggacctctacatgagaattgctcctgagctttaccataagatgctggta
gttggaggaattgaccgcgtgtatgaggttgggcgtcagttccgtaatgaaggcatcgat
ctcacccataacccagagttcaccacatgcgaattctacatggcttacgccgactatcat
gacctgatggaaatcacagagaagcttctctcaggaatggtgaagcacattaccggagat
tataaggtgacgtatcatcctgatggtccagagggacaagcctatgaaatagatttcact
cctcctttcaaacggatcagcatgactcaagacctggagaaggaattgggggtgaagttt
ccagctcctgacacctacgacagtgatgaaacacgcaagttcttagatgacctttgtgtt
cagaaagaagttgaatgtcctcctccaaggacaactgctcgtcttctggataagctggtg
ggagacttcctggaggtgaagtgcatcaacccaacattcatctgtgatcatccacagatc
atgagtcctctagcaaaatggcatagatcacagaaaggtctaactgagcgctttgaactc
tttgtgatgaagaaggagatctgcaacgcatacacagagttgaacgatcctgtcagacaa
cgagagctgtttgagcagcaggctaaggccaaggcagaaggtgacgatgaggcgatgttt
attgatgagaccttctgcactgccttagagtacggccttccacccacggcaggatggggc
atgggcatcgaccgccttaccatgttcctcacggactccaacaacatcaaggaggtgctt
ctcttccccgccatgaaacctgaagacaataaaccagctccacctgcagagggcacatca
gtgtaa
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