KEGG   Garra rufa (doctor fish): 141331800
Entry
141331800         CDS       T11039                                 
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
grf  Garra rufa (doctor fish)
Pathway
grf00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    141331800 (kars1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:grf01007]
    141331800 (kars1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:grf03016]
    141331800 (kars1)
Enzymes [BR:grf01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     141331800 (kars1)
Amino acid related enzymes [BR:grf01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   141331800 (kars1)
Transfer RNA biogenesis [BR:grf03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    141331800 (kars1)
 Prokaryotic type
   Other AARSs
    141331800 (kars1)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d zf-C3HC4_5
Other DBs
NCBI-GeneID: 141331800
NCBI-ProteinID: XP_073692932
LinkDB
Position
3:complement(8340863..8359899)
AA seq 601 aa
MLTLVRICRLQAFRPQTFALPSLQKLPLLVEGNRFRSGKSELKRRMKAEKKAAEKEAKVK
EHQEQKETNDKSPQNAYGADEETLDPNQYFKIRSQAIQALKGTAEDPYPHKFNVDLSLTE
FIEKYNNLQPGDHLPDVVNLSGRVHAKRASGAKLLFYDLRGEGVKLQVMANSRNYKSEED
FVHINNKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFGLKDKETRFR
QRYLDLILNDYVRQKFVTRAKIITYLRSFLDQLGFLEIETPMMNLIPGGAVAKPFVTHHN
ELNMDLYMRIAPELYHKMLVVGGIDRVYEVGRQFRNEGIDLTHNPEFTTCEFYMAYADYH
DLMEITEKLLSGMVKHITGDYKVTYHPDGPEGQAYEIDFTPPFKRISMTQDLEKELGVKF
PAPDTYDSDETRKFLDDLCVQKEVECPPPRTTARLLDKLVGDFLEVKCINPTFICDHPQI
MSPLAKWHRSQKGLTERFELFVMKKEICNAYTELNDPVRQRELFEQQAKAKAEGDDEAMF
IDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDNKPAPPAEGTS
V
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgttgactctggtcagaatatgcaggctgcaagcgttcaggccgcagacgtttgctctc
cccagcttacaaaagctgcctttgcttgttgaaggaaatcgcttcagaagtggcaaaagt
gagctgaaaaggcgcatgaaagctgagaagaaagcggctgagaaagaagccaaggtcaaa
gaacatcaagaacaaaaggagaccaatgacaagtcaccgcaaaatgcatatggggctgat
gaagaaaccttggacccaaatcaatacttcaagatacgttcacaagccattcaagccttg
aagggaacagccgaagatccataccctcacaaattcaatgtggacttgtcactgacagag
ttcattgagaaatataacaaccttcagccaggagaccacttaccagatgttgtcaattta
tcgggtcgtgtccacgccaagagggcttcaggtgccaagctgctgttctatgacctgcga
ggagagggagtcaagctgcaggtcatggccaactccaggaactacaaatcagaagaagat
tttgtgcacatcaacaacaaattaaggcgtggggacatcattggggtccgggggaaccct
ggcaagacaaagaagggcgagttgagcatcatcccgattgagatgactctgttgtctcca
tgtcttcatatgcttccccaccttcactttggcctgaaagacaaggaaaccaggttcaga
cagcggtatctcgacctgattcttaatgactacgtgagacagaagtttgtgacccgcgcc
aagattataacttacctccgcagctttctcgaccagcttgggtttcttgagatcgaaacc
ccaatgatgaacctgatacccggtggtgctgtagctaaaccatttgttactcaccacaat
gagctcaatatggacctctacatgagaattgctcctgagctttaccataagatgctggta
gttggaggaattgaccgcgtgtatgaggttgggcgtcagttccgtaatgaaggcatcgat
ctcacccataacccagagttcaccacatgcgaattctacatggcttacgccgactatcat
gacctgatggaaatcacagagaagcttctctcaggaatggtgaagcacattaccggagat
tataaggtgacgtatcatcctgatggtccagagggacaagcctatgaaatagatttcact
cctcctttcaaacggatcagcatgactcaagacctggagaaggaattgggggtgaagttt
ccagctcctgacacctacgacagtgatgaaacacgcaagttcttagatgacctttgtgtt
cagaaagaagttgaatgtcctcctccaaggacaactgctcgtcttctggataagctggtg
ggagacttcctggaggtgaagtgcatcaacccaacattcatctgtgatcatccacagatc
atgagtcctctagcaaaatggcatagatcacagaaaggtctaactgagcgctttgaactc
tttgtgatgaagaaggagatctgcaacgcatacacagagttgaacgatcctgtcagacaa
cgagagctgtttgagcagcaggctaaggccaaggcagaaggtgacgatgaggcgatgttt
attgatgagaccttctgcactgccttagagtacggccttccacccacggcaggatggggc
atgggcatcgaccgccttaccatgttcctcacggactccaacaacatcaaggaggtgctt
ctcttccccgccatgaaacctgaagacaataaaccagctccacctgcagagggcacatca
gtgtaa

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