Garra rufa (doctor fish): 141331896
Help
Entry
141331896 CDS
T11039
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141331896 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141331896 (ube3c)
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
141331896 (ube3c)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
HECT type E3
141331896 (ube3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
141331896
NCBI-ProteinID:
XP_073693040
LinkDB
All DBs
Position
3:30004454..30053986
Genome browser
AA seq
1079 aa
AA seq
DB search
MFSFEGDFRRTPKVSLGGASRKEEKASLLHRTQEERRKREDERKRLKNAIIIQSYIRGYQ
DRKQQYAIQRGYFDHCVCQCQSGSGPQLTDSAILSQLVRQLLFFYRLSEDRHRMIWMCQS
LVKHHVQFVKLLTGPERQTCLFQIKRILGHCCRLLQACKDDSLNVTVPMRMLEVFSSERT
YLPFLQDENYVTALIEQILHYMVEKGYYRSLYVLVNHKLPSSLEYSDTPSIPLAQTLLEH
TLKPLHFTYSSCPPDTRQFVFSAFTEEFISAPFTEQIYHFFVPALSDSKLAFPFQNFLWS
LQATIVSSAQARAQAPWLFYFVLSVGESGLGSLSEEGLLLYLNALQTLLPLLPVTECTRA
DINSDSEDEEEMTVQHPAAQDGSWISVHYITEECVQKLDTKQQTNALLTLVWRDSASEDI
FTMMASICHTLMVQHRMMVPRVRLLYSLAFNARFLRHLWYLITSMKTKMITGSMVPLLQV
MSRGSPMSLEDSNRIIPLFYLFSSLFSHSLISVHDSEFFGSADGQSQSSMMPFSLAELVT
LSRCMRDACLGIIKLAYPETKTEHKEEYVAAFRSVGVKTNSQVQQRIQAQQKRWVQLFKV
ITNLVKMLKARDIRRPFCPSGHWLSDEVNIRADKVTQLYVPSARHVWRTRRMGRIGPLQS
TLDVGLEPPPLSVSEERHLAILTELPFVVPFEERVKIFQKLIYADKREAQGEGPFLDGVN
VTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSG
FNPNQGFFKTTNEGLLYPSPTAEMLVGESFTRHYFFLGRMLGKALYENMLVELPFASFFL
SKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEGDVEDLGLNFTVVNNDLGEAQVVELKQ
GGKDIPVTTANRIAYIHLVADYRLNKQIRAHCLAFRQGLANVVNLEWLRMFDQQEIQVLI
SGAHVPICLEDLKKFTNYSGGYSANHSVIKTFWDVVESFSDDEKRKLLKFVTSCSRPPLL
GFKELYPAFCIHNGGTDLERLPTASTCMNLLKLPEFCDPQQMRNKLLYAIESSAGFELS
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttttgagggagatttcaggagaacacccaaggtgtcccttgggggtgctagc
agaaaagaggaaaaagcatcacttcttcatcgaacacaagaagaaagaaggaaaagggag
gatgagaggaaaagactaaaaaatgcaatcatcattcagtcttacataaggggataccaa
gacaggaaacagcaatatgccattcagaggggctactttgaccactgtgtgtgtcagtgc
cagtcaggctctggccctcaacttacagacagtgccatactcagccaacttgttcgccag
cttctctttttttacagactaagtgaagacagacacagaatgatctggatgtgccagagt
ttggtaaagcatcatgttcagtttgtcaagctgctgacagggccagaaagacagacctgc
ttgtttcagatcaagaggatactggggcactgttgcaggttattgcaagcatgtaaagat
gacagtctgaatgtgaccgtcccgatgcggatgctggaggtgttttcatctgagagaacc
tacttgccctttctacaggatgaaaactacgtcactgcacttattgagcaaatattgcac
tatatggtagagaaaggatactacagatctctgtatgttttagtgaatcacaagttgccg
tcgagtctagagtacagtgataccccttccattccactggcacaaacgctgctggaacac
acactcaagcctctgcactttacatacagctcctgccctccagataccaggcagtttgtt
ttttcggccttcactgaggagttcatctcagcgcctttcactgagcaaatctatcatttc
ttcgtgccagctttgtcagactcaaaactagcgttcccatttcagaacttcctttggtca
cttcaggccaccatagtctcctctgcccaggccagagctcaggctccctggctcttttac
tttgtgctatccgttggagaatcaggactgggctcactctccgaggaagggttgctgttg
tacttgaacgcgctacagactctgttgcctttgttgccagtgacagagtgcaccagagct
gacatcaacagtgattcagaagacgaggaagagatgaccgtacagcatcctgctgcgcag
gatggcagttggatatctgtgcattatataacagaggaatgcgtacaaaagttggacacc
aagcagcagactaacgctctgctaacattagtgtggagagactcggcaagcgaagacatc
ttcaccatgatggcctctatctgtcacacgctgatggtgcaacatcgtatgatggtgccc
agagtcaggcttctgtacagtttagccttcaatgctcggtttcttagacacctgtggtat
ttaatcacatctatgaagacaaaaatgatcacaggctctatggttcccttattgcaggtg
atgtctcgaggttctccaatgtctctggaggactccaacaggatcattcctctcttctat
ctcttcagttcactcttcagtcattcactcatctctgtgcatgacagcgagttctttggc
tcagcagatggtcagagccagtcgtcgatgatgcccttctctctggcagagttggtgaca
ttgtctcggtgtatgcgggacgcgtgtctgggaatcattaaactggcctatcctgagact
aagacggagcacaaagaggagtatgtagcagcgtttcgcagtgtcggggtgaaaaccaac
agccaagtacagcagcgcattcaagctcagcagaaacgatgggtccagctctttaaggtt
attaccaaccttgtgaaaatgctgaaagcccgagatattcgaagaccgttctgtccatcg
ggtcattggctttctgatgaggtcaacatcagagcagacaaggtgactcagctctatgtg
ccctctgcaagacatgtgtggagaaccaggagaatgggacgtatcggaccacttcagtcc
acgttagatgttggactggagcctccaccgttatcagtatcggaggagagacatttggca
atcctcaccgaacttccgtttgttgtgccctttgaggagagagtaaagatcttccagaaa
ttgatctacgctgataagcgtgaagcgcaaggagagggcccttttttggatggcgttaat
gttaccattagacggaattacatctatgaagatgcttatgacaaattatctcctgagaat
gagcctgatctgaagaagaggatcagggttcatttgctcaatgcacatgggctagatgaa
gctggcattgatggaggaggaatattcagagagttcttgaatgagctgttgaagtcaggc
tttaatcctaaccaaggctttttcaagacaactaatgaaggtcttctctatccgagtccc
actgcagagatgcttgtgggagaatccttcacccggcattacttcttccttggcaggatg
ctgggaaaggcgctgtatgaaaacatgctagtggaactgccgtttgcaagtttcttcctg
tccaagctcttaggcaccagtgcagatgtggacatccaccatctggcctctctagaccca
gagatgtaccgaaacctgcttttcctcaagagctatgaaggtgatgtggaagacctcggc
cttaacttcactgtggtcaacaatgatcttggggaggcccaggtggttgagctcaaacaa
gggggaaaggacatcccggtaaccacagccaacaggatagcctacatccatttagtggcc
gattaccgtctgaacaaacagatccgagcacactgcctggcctttcgacagggcctggcc
aacgtggtcaacctggagtggctgcgcatgtttgatcagcaggaaattcaggtactgatt
tctggtgcacatgtgcccatctgcctggaagacctgaagaaatttacaaactactcaggt
ggttattcagcaaatcattcagtgatcaaaactttctgggatgtggtggagagcttcagc
gatgatgagaaacgcaagctgctcaagtttgttacaagctgctcacgacctccactctta
ggcttcaaggagctgtacccagccttttgcatccataacggaggcactgacctggagcgt
ctgcctaccgctagcacttgcatgaaccttctcaagctgccagagttctgtgaccctcag
caaatgaggaacaagttactctatgctattgaatcctccgccggctttgagctcagctga
DBGET
integrated database retrieval system
