Garra rufa (doctor fish): 141331911
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Entry
141331911 CDS
T11039
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141331911 (lingo1b)
Membrane trafficking [BR:
grf04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
141331911 (lingo1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRRNT
LRR_9
LRR_Zer-1
LRR_RPS2
V-set
Motif
Other DBs
NCBI-GeneID:
141331911
NCBI-ProteinID:
XP_073693054
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All DBs
Position
3:31339527..31352189
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AA seq
622 aa
AA seq
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MTFLQVTIKMVAREASGHSYLVACWQPILILMLGTVLSGSATGCPSRCECSAQERSVVCH
RRKLIALPEGIPTDTRLLDLSKNRLKAINPEEFLNYQHLEELQLNENIISVIEPGAFGNL
LGLRILGLRNNKLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQDLYNLKELEVGDND
LVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLTLRLRHLNINIIRDFSFRRL
YRLKVLEIANWPLLETLTTKALHGLNITTLSITNCNLTAVPYEAIQHLVYLRFFNLSFNP
IEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFRGLNYLRVLNVSSNSLSTLEESAFHSV
GNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPSCESPEFLQGKEFKDFPDVLPPNY
FTCQKSKIRDHKAIHRFVDEGTTVQFPCQADGDPAPMIMWQSPKKQFITTKSIGRLSVSP
DGTLEVRYAQIQDNGTYTCIAVNAGGNDTRLAHLHVHSYSPNWPHQPNKTFAFISNQPND
SGANGTGATDPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYV
PRKVDGDSSPTEGSHKISMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttctgcaggttaccatcaaaatggtggccagagaggcaagtgggcacagctac
ctggtggcgtgctggcagcccattctcatcctgatgctgggtaccgtgctgtccggctct
gccactggctgcccctctcgctgcgagtgcagtgcccaagagcgctcggtcgtgtgccat
cggaggaagctgatcgccctccccgagggaattcctactgacacacggctgttagatctc
agcaagaaccgcttgaaagccatcaacccggaggaatttctcaactaccaacacctggag
gagctgcagcttaatgagaacatcatttccgtcattgaaccaggggccttcggcaacctc
cttggcttgagaatactgggactacgcaacaacaagctgaagttgattcagctgggtgtt
ttcactggcctcagtaacctcactcgtttagatattagtgagaacaaaattgtcattttg
ttggactacatgtttcaagatctctacaacctgaaagaactggaggtgggggacaacgac
ctggtgttcatctcccacagagcttttcatggcctcagcagcctagagcagctcactatg
gaaaggtgcaacctgacctctgtgccaacagaggccttcagtcatctgcacaacctgctg
accctcaggctgcggcatctcaatatcaacatcattcgggatttttccttcaggcgactc
tatcgactcaaagtcttagagatagcgaactggcctcttttagaaaccttgaccacaaag
gccctccatggacttaacatcacaaccttgagcatcacaaactgcaatctcactgccgtc
ccttacgaggccattcagcacctggtgtaccttcgctttttcaacctgtccttcaatccg
attgaggttgtggagggcaacaaaatgcacaatttgctgaggctccaggcatttcacttg
gtcggaggccggctagtcagcatcgagccttattccttcagaggactcaactaccttcgg
gttctcaatgtatccagcaatagtctaagcactttggaagagtctgccttccactcggtc
ggaaacctggagacactggctcttcacgacaaccccctggcatgcgactgtcgtctccta
tgggtctttcgtcgccggtggaggcttaacttcaaccgccagcagccatcttgtgaatca
ccagagtttttgcagggtaaagaattcaaagacttcccggatgttctcccgccaaattat
ttcacctgtcagaaatccaagatccgggatcacaaagccattcatagatttgtggatgag
gggaccaccgtccaattcccttgccaagcagatggagaccctgctcccatgattatgtgg
caatctccaaaaaagcaatttatcaccactaaaagcatcggccggctgtcggtgtctccg
gacggcaccctagaggttagatacgcccaaatacaagacaatggcacgtacacctgcatt
gccgtcaacgcaggaggtaacgacacgcgtttggctcacctacacgttcatagctactct
cccaattggccccatcagcccaataagacatttgccttcatctcaaaccagcccaatgat
agcggtgccaatggaactggtgcgacggatccctttccctttgatatgaagactctcatt
atcgctaccaccatggggtttatctctttcctgggagtggtgctgttctgtctggtgctc
ttgttcctctggagccgagggaaaggcaatgccaagccaaacatcgagattgagtatgtg
ccacggaaagtagacggagacagcagcccgaccgaggggtctcacaagatcagtatgaaa
atgatttaa
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