Garra rufa (doctor fish): 141332014
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Entry
141332014 CDS
T11039
Symbol
irx5a
Name
(RefSeq) Iroquois homeobox protein 5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141332014 (irx5a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
141332014 (irx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
141332014
NCBI-ProteinID:
XP_073693190
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All DBs
Position
3:38232492..38235959
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AA seq
445 aa
AA seq
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MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSAEAAAATFTSYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNATRD
ATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRN
RSEDEEEDENIDLEKNDDDEPNKPTDKGDSTDTEADHKLINPGEIPCDRFKDESHAKDLD
PPLTDSELKDTEERTDLLAEQAKPTTSSPSVLQRGNDLITQEKPSEPGHAASTGNSNVTS
VIHSPPSAPKPKLWSLAEIATSSDRCKGSSEAPQAAGLGQSTVIASAASPTRSSPQCPLP
NNTVLSRPIYYTSPFYPGYTNYSTFGHLHSSHGTNTSSTAHFNGLSQTVLNRAEALVRES
KVRSQTQVDLCKDSPYELKKGMSNI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccctcagggctacttgtatcagccatccgcctctttggcactctattcgtgt
cctgcctacagtacaagcgtgatatcgggaccccggacagaggagctagggagatcttcc
tctggctctgctttcgctccctatgccggatctacagcgttcaccagcgcctcgccaggc
tacaattcccatctcccgtacagtgctgaagcggccgccgccactttcacttcttatgtg
agctccccgtatgaccatacgacaggcatggccggatctatagggtatcatccttacgct
gctcccttgggctcgtacccttatggagacccggcttaccgcaagaatgctacccgggac
gccacagccactttgaaagcttggcttaacgagcaccggaaaaacccgtaccccaccaaa
ggcgagaagatcatgctggccatcatcacgaaaatgaccctcacccaagtgtccacctgg
ttcgctaacgccaggaggaggctaaagaaggagaacaagatgacctggaccccgcggaac
cggagcgaggacgaggaggaggacgaaaacattgatctcgagaaaaacgacgacgacgag
ccaaacaagcccacggacaagggagactccacagacacagaggcagatcataaactcatc
aacccaggggagataccatgcgacaggtttaaagacgagtctcatgctaaagatcttgat
ccacctttgacagactcggaattaaaagacacagaggagcggacggatttgctcgccgag
caagcaaaacccaccacctcttctccctccgtcctacagagagggaatgatctcattacg
caagaaaagccctcagaaccgggccacgctgcgagcacggggaacagcaacgtaacgtct
gttattcattctcccccttcggcgcccaaacccaaactctggtctctagccgagatcgcc
acgtcttcggacaggtgcaaagggagcagtgaggctccacaggccgcggggctgggtcaa
agcacagtcatagccagcgctgcctcgccgacccggtcctcccctcagtgccctctcccc
aataacactgtcctttctcggcctatttactacacgtcccctttttacccgggctacacg
aactatagcactttcggacacctccacagcagccacggcaccaacaccagctccacggca
catttcaatggattaagccagactgttttaaacagagccgaggctctggtaagagagagc
aaagtaagaagccaaacacaggtagatctttgtaaagactcaccttatgagctaaagaaa
ggtatgtcaaacatttaa
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