Garra rufa (doctor fish): 141332081
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Entry
141332081 CDS
T11039
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141332081 (sox19b)
Transcription factors [BR:
grf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
141332081 (sox19b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
141332081
NCBI-ProteinID:
XP_073693273
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Position
3:46096628..46099734
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AA seq
293 aa
AA seq
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MMYSMMEHELKTAGPHHPHHNSPGMSPPVSGVGNAHHGSKNSCPPGGDPMDKVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDTEKRPFIDEAKRLRAVHMKEYPDY
KYKPRRKTKALIKKDNPIGKYPLAAGNLLASAVAQGQSGSPRMDGYGWGHTGGYMSMQGE
ALGYPQQLHRYDLSALQYPAAQTYMNGASSYSQMSYSGSPQQPSPVMSMVKPEPLSHSPT
GVPNHHRGAFQGDLRDMISMYIPGGDASDGSNQRAYAGVQQHYLGGTVPLTHI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacagcatgatggagcatgaactgaagaccgcaggtccacatcatccccaccat
aacagtccagggatgtctcctccggtcagcggggttggaaacgcgcaccacggttcaaaa
aactcttgtccacccggcggggaccctatggacaaagtgaagcgccccatgaatgcgttt
atggtgtggtcccgaggtcagcggaggaagatggcacaggagaaccccaaaatgcacaac
tcggagataagcaaacgcctcggggcggaatggaaacttttaacggacaccgaaaagcgg
ccgttcatcgacgaggcgaaacgtttgcgagccgtgcacatgaaggagtaccccgactac
aaatacaaacctcggcgtaagaccaaagctctcattaagaaggacaaccccatcggtaaa
tatcctctcgccgccggtaacctgttagcgtcagccgtggcacagggacaaagtgggagc
ccgagaatggacggctatggctggggtcacaccggtggttatatgagcatgcagggtgaa
gcactcggatacccgcaacaactgcaccggtacgacctgtcagctctccagtacccggcg
gcacagacgtacatgaacggggccagctcttacagccagatgtcatatagtggcagccct
caacagcccagtccagtgatgtctatggttaaaccagaacccctatcccattcacctact
ggagtaccaaaccaccaccgtggggctttccagggagacctgagggacatgattagcatg
tacattccaggtggtgatgccagcgatggctcaaaccagagagcctacgctggtgtccaa
cagcactatcttggtggaactgttcccctcactcatatctga
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