Garra rufa (doctor fish): 141332122
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Entry
141332122 CDS
T11039
Symbol
ajuba
Name
(RefSeq) LIM domain-containing protein ajuba
KO
K16682
LIM domain-containing protein
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141332122 (ajuba)
03036 Chromosome and associated proteins [BR:
grf03036
]
141332122 (ajuba)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
141332122 (ajuba)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
141332122 (ajuba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
141332122
NCBI-ProteinID:
XP_073693319
LinkDB
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Position
3:48273550..48284087
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AA seq
694 aa
AA seq
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MDRLGSKLKQKLKLSDSGSVKFSKKKNDLANANNNSNSNNANNGTVTQINTPVSTSQFPL
SCSTSVEVCGQSAGRPGKVGTSQRIAPSSTTSATVSEDCGPGNEHHPSTLAPLRRRSPQQ
RASCYLPESVERGDSPRCEGDPQGAYSPNSRVALKQRRYSLELQQLVRRQQLLAQPPPLS
SVPPPYPTHNSAARSSAVEPSFLHDLERHKRLSLQEALFYKRLSSGGEPWDSGRPASLSH
PPQRTHDSGIGGFFFPPAPALSPCSSFSLQESVLASPRSSFASSTASGGGGGGGSPMGSR
CSSNRTSGISLGYDTRHTPGPAQQLQLSSTQLGGATSGQAYPVQASGKTGAPPMEVWRDC
LEGVSGGSAHDSRHSYPPALSTPTVTFHRAEPEWGPADQRGSRSDGAGERARHSDMLGTR
YQQELTRLLLRDAALEGEALLGGLTLKEQPVSATILSSSVTTPAPIGAPGKSLEEQSAGS
VDRQEYFGTCVKCGKGVYGADNACQALDSLYHTRCFTCVSCGRTLRNKDFYNVSGSVYCK
EDYMFSGFQEAAEKCSVCGHLILDQILQALGNSYHPGCFRCTVCSKALDGVPFTVDYLNN
VYCVSDYNRTFAPKCAACLQPILPAEGSEEILRVVSMNKDYHFECYHCEECGKQLSDEPG
SQCFPLDSHLLCHSCHMTRVCVTHNLPPSQHTLK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggatcgacttggcagcaaactaaagcagaagctcaaactgagtgactctggaagtgtc
aaattcagcaaaaagaaaaatgacttggccaatgcaaacaacaacagcaatagcaacaat
gccaataatgggaccgtgacacagatcaacacacctgtgagcacgtctcagttcccactc
tcctgttccacctctgtagaggtgtgcggtcagtcagccgggcgacctggcaaagtgggc
acttctcagagaatcgcaccctcgagtaccacctcagccactgtatctgaggattgcggg
cctgggaacgaacatcacccatctactctcgcccctctgcggcgccggtcgccccagcaa
cgagcctcgtgctatttacctgagtccgtggaacgaggcgactcacccagatgcgaaggt
gacccgcaaggggcgtacagcccgaattctcgtgtggccctaaagcagcggcgctattct
ctagagctccagcagcttgttcgccgccagcagcttcttgcccagccaccaccgctgtcg
tcggtgccacctccatacccaacgcacaactctgcagcccgttcctcagctgtggagccc
agtttcctccacgacttagaacgccacaagcgtttatccctacaggaagctctgttctac
aagcggctgagttcaggtggcgaaccttgggacagcgggcgccccgcttccctctctcat
ccaccgcagaggacccatgacagcggcatagggggcttcttcttcccacctgcacctgcg
ttgagcccttgctcttctttcagcttacaagagtccgtgttggcaagcccccgctccagt
tttgcaagcagcaccgctagcggaggaggcggaggcggtgggagtccaatgggaagccgg
tgcagcagtaaccggaccagcggcatcagtttgggctacgacacccgccatacacctggg
cctgcccagcagctccagctttcctcaacccaacttggtggcgccacctcgggtcaggcg
taccctgtacaggcttcagggaaaacaggagcgccccctatggaggtttggagggactgt
ctcgaaggggtgtcaggaggaagtgcgcacgacagccgtcactcatatccgcctgcgctg
agcacacccactgtcaccttccaccgagcagaaccagaatggggtcccgctgaccagcgg
ggatcaagaagtgatggtgctggcgagagggcacgacactccgacatgctaggaaccaga
taccagcaggagctcacccgcctgctattgagagatgctgccctggaaggagaagcgtta
cttgggggtctgactttaaaagaacagcccgtgtctgccaccatcctatccagctccgta
actactccagccccaattggagctccagggaaatccctggaagaacagtcggctggatct
gtggacagacaggagtacttcggtacatgtgtgaagtgtggtaaaggtgtatatggtgca
gataatgcttgccaggctctggacagcctctatcacacccgctgcttcacatgcgtttcc
tgtgggcgaactctccgcaacaaggacttttacaatgtcagtggctctgtttactgtaag
gaggattacatgttctcaggcttccaggaggcagctgagaagtgcagtgtttgtggtcac
ctcatcttggatcagattctacaggctctagggaactcttatcacccaggatgtttccgc
tgtacggtctgctcaaaggctttagatggagtgccattcacagtagactacctcaacaat
gtctactgcgtctctgactacaacaggacatttgctcccaaatgcgctgcctgtttacaa
cccatcttacctgctgagggcagtgaggagatcctcagggtggtgtcaatgaacaaagat
tatcactttgagtgttatcactgtgaggagtgtgggaagcagctctccgacgagcctgga
tctcagtgcttccctctggactcccacctcctctgccactcttgccacatgaccagggtg
tgcgtcacacataacctccccccctcacaacacacactgaaatga
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