Garra rufa (doctor fish): 141332209
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Entry
141332209 CDS
T11039
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
grf Garra rufa (doctor fish)
Pathway
grf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141332209 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
grf03021
]
141332209 (taf6l)
03036 Chromosome and associated proteins [BR:
grf03036
]
141332209 (taf6l)
Transcription machinery [BR:
grf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
141332209 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
141332209 (taf6l)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
141332209 (taf6l)
STAGA complex
141332209 (taf6l)
TFTC complex
141332209 (taf6l)
SAGA complex
141332209 (taf6l)
SLIK complex
141332209 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
141332209
NCBI-ProteinID:
XP_073693426
LinkDB
All DBs
Position
3:complement(53122825..53130509)
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AA seq
641 aa
AA seq
DB search
MTEREERRFAEVPRESIKLMAESTGVELSEEVAALLAEDVCYRLREATQNSSQFMRHAKR
RKLSVEDFNRALRWSNTETVCGYGAQDALPFRPLKEGELFFVEDREINLVELALATNIPK
GCAETMVRVHVSYLDGKGNLEPQGTVPTAVQSLSEDLLKYYQQITRAILGEDPHLMKVAL
LDLQSNSKIAVLLPYFVYVISGVKSVSHDLDQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSLTLAAEGGGAGQPGTAAGAVGIRENSPGLSPPPEPLSEPPLGIA
SHLQAGGAGCPWEEWTPVSLPAMYCELYSFFGDSLAVRFSTDPPLGGAQPPSSCQPLEGR
KEPASGAPNLENTRKMPQLTASMNISPRQDGSPRTEPQPPSLAATVPGRSLARSSSSSSS
VSRSRSSSSRPGRSTSQSRDIFPKARFPLPQAGPPAFSFIIGGRQMGRRCQGRRFQTSFT
PTPPLNTLPPRAYAHKLPVIGRVSKPVRRWTCSHYSLHLPL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgacggagagggaggaacggcgcttcgccgaggtgccccgggaatccatcaaactaatg
gccgagagcaccggagtggagctcagcgaggaggtggcagctcttctggcggaggatgtg
tgctaccgcctcagagaggcaacacagaacagctcacagttcatgagacatgcaaagaga
aggaagctgagcgtggaagactttaatagagctctacggtggagcaatactgagactgtt
tgcggttatggtgcgcaagatgccttaccattccgtccgttaaaagaaggagagcttttc
tttgtagaggatcgggagataaatctggtggagttggcacttgctactaacattcccaaa
ggctgcgcagagacgatggttcgagtgcacgtatcatatcttgatggaaaaggaaatttg
gaacctcaaggcacagtgcccactgctgttcagtctctatcagaggatctgctgaagtat
taccaacaaataacgcgagccattttaggagaggacccacatctcatgaaggtggctttg
ttagacctccagtccaattcaaagattgctgtgctcctgccttactttgtttacgtcatc
agtggggtaaagtcagtaagtcatgatctggaccagttaaacaggctcctacacatggtg
aagagtttggtgcaaaacccatacctgtacttgggctcatatgtgcgcagtctggtgtct
agtgtcatgtactgcatcctggagcctctggctgcttccatcaaccccctcaatgaccac
tggaccctgagagactatgcagctcttctgctcagccacatcttctggacacatggggat
cttgtgagtgggctgtaccatcagatccttctgtctctgcagaaagttctttccgatccg
gttagacctctctgttcccactatggagctgtagtgggtctgcatgctctcggctggaag
gctgttgaacgtgtgttgtatcctcacctccctgcctactgggcgaatctacaagctgtg
ttagatgattactctgtgtccaacgctcaggtgaaagcagatggccacaaagtctatgga
gccattctggtggcagtagagcgtttgctgaagatgaaggcactcagtttgaccttggca
gcagaaggaggtggtgctggtcaaccaggcactgccgcaggggctgtcggcattagagaa
aactcgcctggcctcagcccgcctcccgaacctctgtctgaaccccctcttgggatagcg
agccatctccaagcaggtggggccggctgtccatgggaagaatggactcctgtatctctt
cctgccatgtattgtgaactctactccttttttggagacagtctggctgtacgtttcagc
actgatccaccactaggtggcgcccaacctccaagttcctgccaaccgctagagggcagg
aaagagccagcgagtggtgcccccaatcttgagaatacacgaaaaatgccccagctaact
gctagtatgaatataagcccacgacaagatggaagtcctcgtacggaaccacaaccaccc
agtctggctgccaccgtcccggggagatctcttgcccgctcttcctcctcctcatcttca
gtctcacgttccaggtcatcttcatcacgtcctggacgttccaccagccaatcccgagac
attttccccaaagcccgcttcccgctgcctcaggctggacctcctgctttctctttcatc
attggcgggcggcagatggggcgacgctgtcagggacgacgcttccagacgagctttact
ccaactccacctcttaataccctcccgcctcgtgcttacgcccacaagctaccggtcata
gggagagtcagcaaacctgtgcgccgctggacgtgttcccattactcgcttcacctgccg
ctttaa
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