Garra rufa (doctor fish): 141332249
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Entry
141332249 CDS
T11039
Symbol
irx6a
Name
(RefSeq) Iroquois homeobox protein 6a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141332249 (irx6a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
141332249 (irx6a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
141332249
NCBI-ProteinID:
XP_073693478
LinkDB
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Position
3:38392637..38397193
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AA seq
494 aa
AA seq
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MVTKEAAMSFSQFGYPYNATSQFFVSANPSTTCCDSISRSVTEGSSASQTAASFCCPSYE
NRLLASTRTELNAALGMYGSPYAAAAAAAGQNYANYFPYSADPSAIYSSLNPQYEIKEGS
GSLHGTITQPATYYPYDHSLGQYQYDRYGTVDFNGSTRRKNATRETTSTLKTWLYEHRKN
PYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKAGDDRKEDLNKSDP
DSITKDSKDSKDERDLQFSDLDDIEDEDCDKLDSDCEKSGQDDLSTSSPPKRDCNPDLPL
HSNFPSFPCGLKSLGALNPDYLDPLGSKLQQQQHSPQSTSINTVALSHFESSEKPRIWSL
ARTAAAGVVLGTHHGGDVRTGPVDCQMQGVRLPTIGGVQCGELKGLQDPTSLSNTESLYQ
EGLQGIHKAYSSGNYKTLQLHSSSYPGLTESCQYSSIEGFTSAGKTGTESSELNDTCPAN
QDAKTTAFRPVMKR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaagaagccgctatgtctttctctcagtttggatatccttacaatgcaact
tctcagtttttcgtgtcggcaaaccccagtacgacttgctgcgattcgatttccaggtcg
gtgacggaaggatcgagcgcgtctcagaccgcagcctccttctgctgtccctcctatgag
aaccggctgctggcgagcacacggaccgagctgaacgccgcgctcgggatgtacggctct
ccctacgcagcagcagcggccgcagccggtcagaactacgccaattactttccgtacagc
gccgacccctctgccatctactccagcctgaatccacaatatgaaatcaaagaggggtca
ggcagtcttcatggcactataacccaacctgccacctactatccatatgatcactcattg
ggccagtaccagtatgacaggtatgggacagttgattttaatgggtcaacccggagaaaa
aatgccacacgggagaccaccagcactcttaaaacatggctttatgaacatcggaagaac
ccatatcctacaaagggtgagaagatcatgctggccattatcaccaaaatgactctcaca
caagtgtctacctggtttgccaatgctagaaggagactaaaaaaagagaacaagatgacc
tggtcccccaaaaacaaagcgggcgatgacaggaaagaagacctcaataagagtgaccca
gacagtattaccaaagactccaaagacagtaaagatgagcgggacctgcagttcagtgac
ctggatgacatagaagacgaggactgtgacaagctggacagtgactgtgagaaatcaggt
caggatgacctctcgacttcctcccctccaaagagagactgtaaccctgacctccctctc
cactcgaacttcccatcttttccctgtggtctaaagagtttgggggctctgaaccctgac
tacctggatcctctgggctccaaattgcagcagcaacagcactcacctcagtccacctcc
atcaacactgtggcactctctcactttgagtcatcggagaagccccggatctggtcgctg
gcacgtacggctgccgcaggagttgtattaggcacgcaccatggtggggatgtacggact
gggcctgtggactgtcagatgcagggagtcaggttgcccacaatcggaggagtgcagtgt
ggggagctgaagggccttcaggaccctaccagcctcagcaatacggaaagcctctaccaa
gaaggactgcaggggatacacaaggcatacagtagtgggaactacaagaccctccaactt
cactcttcatcctatcctgggctgacagaatcctgccagtattcctcaatagaaggcttc
accagtgcaggaaagacagggacagaatccagtgagctcaacgacacatgtccagcaaac
caggatgccaaaaccactgcattcagacctgtgatgaagaggtga
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