Garra rufa (doctor fish): 141332514
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Entry
141332514 CDS
T11039
Symbol
arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141332514 (arhgef40)
Membrane trafficking [BR:
grf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
141332514 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
PH
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
141332514
NCBI-ProteinID:
XP_073693747
LinkDB
All DBs
Position
3:complement(1817833..1861489)
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AA seq
1813 aa
AA seq
DB search
MVERKMVTMVNGNTAAMSRKELEEGIPHISSKLMRKLQDTPIWNKPRRTPMKRLCLGFLD
CLYDCGSEAVEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDFFIPAK
HLLHRLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSTDFYLQVVPFSTRC
PRLALKCLASSGRNVQEVLVPESQHPLVFTSEWLHCINKERGCKREGGGCLDTCLVSTCD
GVVRIPWEEVVYPKLLHNPSDPLQDKPDKTDLSSGGLGLGWSSSSGEHDSWSWDEEDDLP
PDGNEAEIEAALECLRRSSDDHLVADGAGDYVELLEPRGGPDGGADPKQRYLEMHGICKT
RTLPLCRRGKAIRIRKGKGRGYGKTEPGARAGSLVRRDSNNNGKDGVVSCSDLATSRPLP
RVIDLGRQRRSYCPSFQDSDEGARDPEGLEYSSHCMDKERRPGVGKERDGTGGTLPWEER
KKCSSRRCSTDDNDVAKNKAVSLEKGQQAHNQRSHCGCDDKILASTLDGRHKVATLANPS
NATDNGAVPLAVHGETEDINKKLAGESGTRTMSLQDSSLNSASYSSSCAQSRTKQEKTDK
ILPPSGTVSSTEEKCPGKSENFVCPRGKEVKTGGFRAPRRKRKAKGGKGKVKSNVRVQHK
GKGDQIASKNPTKATQMISHSSRSEEAPKLSKDCNGCIAATDTETDAKSKAKDGESQSGT
SLPDHSQNEMGLSESAAHLESKAPPPHLRDLDFNLLQSGKLILTGTMDRLGRALVTTESH
LPENGWNTDEMIKVLSCYYTITRPMAKEKGLTVVVDSRKSAPSELCLSALKLFKGQASTG
LDSVLILTEEQDESTQPCLDGIEVHTVRGTGVLQQFVDKQQLPKDMGGDFNHSHEDWLAF
RLSLEQLTERCESALTLLGDALQSMDTQPLPDCIKNVPLSVDKHRQLMTSILTDQRLTEL
QQRGGAWLAGLANGPSGLAQKSPDCKAALAVTTNLYDGVDDALHRLVRVSNQRGRDLEAL
GRLAALVDKLDKCERDVEHVQQQLKDYKHPPLSLSRLSLKQHKFKSFRESAMELHSETLV
VLGEVESWSELDWPGLTAVLDKLPPIREKVRDMSHCLSDCWTQLDNTQRLLSTLTEASQW
CDVVSSSSPSSSSPSPLSSLPPIPPSRFQDARALALDLGGGALLDLWSQTLERYQKTLAQ
FKSRILQAERGSSTTLGQEPDSGVRGRTPAPSTSSLGDLEGEIEPDWCPGGGEGGLQSWG
SLASLFRPQNCSTLKIGEEKKKEGVNPGGGKFLQNLLYPAKKNATDAPLPPKPPRKRHPS
FDLQALLAPRRSVAVSKPAESTSGQSSPLSWLSRRALTDPILTAGVAAAVPGWKEPAGGG
GTGAGGVLIRGVEVSSKEVADHTGFTRQHVLLNRTERETVMERAGVTAQSKLYLQWCRLV
STERQYVAVLKGVEENYLPLLESPDVPSALRGKTESLFCNWKSLFAFHSQSLLPAMEGAL
SQTLQQTDCFSKYKDQFLLYSHYIRMRLEPDALLISQAADFFRSKLSSSLVPAPPFPQCL
STPIQRLEQYCQTLEELGGLNPTSDSALSILKHAQRHGEDLRASDLITGCPIPVAERGEL
VRQGELCVCGGGRRKKTGIRHVFLYQNFVIFTKHKTPNPGCSVYSFKHSIKTGEMGLTQS
VGEDGLRFEVWVRQASKTRDCLTLQASSVQEKQVWSHDIAQLLWTHAIHNTELCLKESLC
MGVSSKLLLDLTGAQASELDSSFSLNDRVQSSCSDSSSVGSMKEGDSPASARVSKRNGEQ
TGHTQSSSPSTSV
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaaggaaaatggttactatggtaaatgggaacacagcagctatgagtaggaaa
gagctggaggagggaattccccacatctcttcaaaactcatgaggaaactgcaggacaca
ccgatctggaacaaaccgaggaggactcctatgaaaagactctgtttggggtttctggac
tgtctttatgactgtggttcagaggcggtagaagactgcgtgcagggggcgctatcttcc
ctctaccctccttttgaaagcaccgctcctcctctcctctctcaggtgttctccgtactc
gagtccacctatcagcacgacagcttgagatacctgctggatttcttcattcctgccaaa
caccttctgcacagattacagcagcatgcatgttctcagtatctgggctgtctcttcttg
cactctggttggccactctgtttgggagagaaggtagtagtacaactctctactttggac
tggagactcctgcgtagtactgacttctacctacaggtggtccccttctcgacgcgttgt
cctcgccttgctcttaagtgcctagcatctagtggcaggaatgtacaggaggtcttagtg
ccagagtcacagcatccgttggtgtttacttccgagtggttacactgcatcaacaaggag
cgtggctgcaagagagaaggtggaggatgtttggacacttgtctggtgagcacgtgtgac
ggagtggtccgtattccatgggaagaggttgtctatcccaaactcctccacaatccatcc
gatcctctccaagacaaacctgacaaaactgacttgtcatcagggggtttgggccttggt
tggagcagctcttcaggagagcacgattcctggtcctgggatgaagaagatgacttgcct
ccagatgggaatgaggcggagattgaggctgcattagaatgcctgcgcagaagcagtgat
gaccatcttgttgctgatggtgctggagattatgttgagctgctagagcccagaggaggc
ccagatggtggtgctgatcctaaacagcgctatctggagatgcatggaatatgtaagacc
agaacattgcccctgtgtaggaggggtaaagcaatacgaatacgaaaggggaaggggaga
gggtatgggaagactgaacctggtgctagggctggaagtctggtacgaagggatagcaac
aacaacggtaaagatggtgtagtttcctgcagtgacttggctacctcacggcctttgcct
cgtgtcattgatttgggtcgccaaagaaggtcgtattgcccttcgttccaggactctgat
gaaggtgctagagacccagaaggccttgaatacagctctcattgtatggacaaagaaagg
aggccaggggtaggaaaagagagagatgggactgggggtacactgccctgggaggagaga
aagaagtgttccagcaggcgatgttccacagatgataatgacgtggctaagaacaaagca
gtgagtctggaaaagggacaacaggcccataatcaaagatcgcactgtggctgtgatgat
aaaatattggccagcactttagatggtagacataaggttgcaacattagcaaatccctcc
aacgctacagataatggagctgtccctttggctgttcatggagaaacagaagacataaac
aagaaattggctggagaatctgggacacggacaatgtctctccaagattcttccctgaac
agtgcatcttattcatctagttgtgcacaaagcagaaccaaacaagagaaaacagataaa
attttgccaccatcaggtactgtaagctccacagaagaaaagtgtcctggaaagtctgag
aactttgtttgtcccagaggaaaagaagtaaaaacaggtggatttagagcacccaggagg
aaaaggaaagctaaaggaggcaaagggaaggtcaaatccaatgtccgtgtccaacataaa
ggcaagggtgaccaaattgcctcaaagaacccgaccaaagccactcaaatgatcagccat
tctagtcgatcagaggaggctcctaagttatccaaagattgcaatggctgtatagcagcg
accgacacagaaacagatgcaaagtcaaaagccaaagatggagaaagccagtctggcaca
tcccttcctgaccattcccaaaatgagatgggattatccgaatctgctgctcacttagaa
tccaaagccccccctccgcatcttagagacctggatttcaatcttctgcagtcagggaag
ctaatattaacaggtactatggaccgactgggacgagcattggttaccacagaaagtcac
ctcccagagaatggctggaacacagatgaaatgatcaaagtgttgtcctgctattacacc
atcaccagacctatggccaaagagaagggtcttactgtcgtagtggacagcagaaagtct
gccccgtctgaactctgtctttctgcactgaagctcttcaagggacaggcatcaacaggg
ctcgactcggttcttatcctaactgaggaacaagatgaatcgacccaaccatgtctggat
ggaatagaggtgcatacagtacgaggtacgggcgtccttcagcagtttgtggacaagcag
cagttgcccaaagacatgggtggagactttaaccactcacatgaggactggctcgctttt
agactgagtttggagcagctgactgaacgctgtgagagcgccctcaccctgctgggagac
gcactgcagtccatggacacacaaccactacccgactgcattaagaatgttcccctcagt
gttgacaaacacagacagttaatgacaagtatcctcactgaccaacggctgacagagctg
cagcagaggggcggggcttggctggcaggtctggccaatgggccatcagggttggcgcag
aaatcaccagactgcaaggctgctttggcagtgaccactaacctgtatgacggtgtggat
gatgcgcttcaccggctggtgcgtgtgtccaatcagaggggtcgtgacctggaagcgctg
gggagattggctgcacttgtggataaattggacaagtgtgagagagatgtagagcacgta
cagcagcagctcaaggactataaacatcctcctctgtctctcagcagactgtcactcaaa
cagcacaagttcaagagcttcagagagtctgcaatggagcttcacagtgagactctggta
gtgctgggagaggtggagagctggtctgagctggactggcctggtctcacagctgtgctg
gacaaactccctccaataagggaaaaagtgagagacatgtctcactgtctgtcggactgc
tggacacagctggacaacacacaacgactgctgtctacactcactgaagcgtctcagtgg
tgtgacgtggtgtcgtcctcctctccttcctcgtcctcgccctcccctctctcctctctc
cctcccatccctccatcacgtttccaggatgctcgtgctcttgcgctggatctgggtggt
ggggctttgctggacctctggtcccagactctggagcgctatcagaaaacactggctcag
tttaagagccgaatcttgcaggcagaaagaggctcctcaacgaccctgggtcaggagccg
gactccggggtacgaggaaggactcccgcccccagtacctccagcctgggggatttagag
ggggagattgagccggactggtgccctggaggaggagaggggggcttgcagtcctggggt
tcattggcgtccctcttccggccacaaaactgctcaacgctcaagattggagaggaaaag
aagaaagagggggtgaatccaggaggggggaagtttctgcaaaatctgctctacccagcc
aagaaaaatgccacagacgcccccctccctcccaaacctcctcgtaagcgtcatcccagt
tttgacctccaggctctactggccccgcgacgttcggtcgccgtgtctaaacctgccgag
tccacatcgggccagtcctctccactgtcctggctgagtcgccgggcgctgacggatccc
atccttacggcaggggtggcagcagcagttccaggatggaaggaacccgctggaggagga
ggaacaggagcaggaggagtgctgatcagaggagtggaggtcagcagtaaagaagtagcg
gatcatacaggcttcacgcgccaacatgtgttgctcaaccgcaccgaaagagaaacggtg
atggagagagcaggagtgaccgcacagagcaagctttacttacagtggtgtcggctggtc
agcactgagaggcagtatgtggccgttcttaaaggtgtggaggaaaactatctgcccctt
ctggagtctccagatgtcccgtctgcactgagaggaaagacagagtcacttttctgtaac
tggaaaagcctctttgccttccattcgcagtcactcctccctgctatggagggcgctctc
tcccagacactgcagcagactgactgtttcagcaaatataaggatcaatttcttctgtat
tcccactacatccggatgagacttgagccggacgctctgctcatcagtcaggctgctgac
ttcttcaggtcaaagctgtcttcctctcttgttcctgctcctccgtttcctcagtgtctc
tccactcccattcagagactggagcagtactgccagacactggaggaactgggtggcctc
aatcccacctctgactccgccctctccatcctgaaacacgcccagcggcacggcgaggat
ctgcgagccagtgatctcatcacagggtgtccgatccctgtggcggagcgtggagagctg
gtgcgtcagggtgagctgtgtgtttgcggtggaggccgacgaaagaaaacgggaatcaga
cacgtcttcctttatcagaactttgtcatcttcaccaaacacaaaacacccaacccagga
tgcagtgtgtacagcttcaaacacagcattaagaccggtgagatgggtctcactcagagc
gtcggcgaggacggactgaggtttgaggtgtgggtgagacaggcgtccaagaccagggac
tgtctcactctccaggcctccagtgtgcaggagaaacaagtctggagccacgatatcgca
cagctgctctggacgcacgctatccacaacacggagttgtgtctgaaggagtctctgtgt
atgggagtttccagtaagcttctactggatttgacgggagctcaagcttcagaactggac
tccagcttcagcctcaatgacagagttcagagcagttgttcagattcgtcttctgtgggc
agcatgaaagagggcgactcacccgcctctgcaagagtttcaaagagaaatggcgagcaa
acaggtcacactcagagctcttcaccctccacctctgtgtga
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integrated database retrieval system
