Garra rufa (doctor fish): 141332805
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Entry
141332805 CDS
T11039
Symbol
caprin2
Name
(RefSeq) caprin-2
KO
K18744
caprin-2
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141332805 (caprin2)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
141332805 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
C1q
Caprin-1_C
BclA_C
DUF1179
Motif
Other DBs
NCBI-GeneID:
141332805
NCBI-ProteinID:
XP_073693866
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All DBs
Position
4:complement(18312449..18326848)
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AA seq
945 aa
AA seq
DB search
MSETKIMVQLSPSRTIETMTPESTVEKEDGQGSPKSESPRVLTALQLALNPASTTYYGYE
KYIEDGLICLKHKIRNIEKKKLKLESYNERLKNGGKLNQDQLEAVGKYEEVVHNLAFAKE
LQKTIGALTQDLLRAQRKAARQEKLMKIEEDRKHLSLMLQVQYVLHSLQREDVRRNFCNT
RQHSCYLSTQDIKSLLDLATLLGCKRDHTMSLEDQMEQAAIVYWELLEGKERPVAGSTYK
HMKEKLLKLVDSGFFDHVPLPKVDSQVKTETLKPDPPSRPCGLSTLMKLSSKEVPSKEFL
NRRYLPETDVSERRQDEKSSPRSWKEEFLAMKEREPPDSWEMEFSDPPLSSQSQIQKPWK
GAAGLIPKTADIAKRPTIDPKEKRQRKSKVEQDSKPVPVAVEVFGSPSSLPKDPVQRKQQ
LESLMDQISGSFSFMQDSLLDGETSPVNGQIKRCRPSPGSSTPLAQRELTKSPSDILPQS
QHSTPLRILLSGEAKSCLVNGDRSINSSDLDLHHEEKPQKQGEGFTSPPLYRRGSSISVP
LENQSTVQAGKQTLCNGVSTTVSAPTFSTPPSHRSIIADNTFHNIHSVFNVASLPISESS
GMKSDESGFSESMHLNYTSAKTQNYSTASTQTPPELNLPEDDLQIESQYQLESPVSAGGH
VFSGPQPQSRLGQSCYPRGTARGMTRAGRGLGHSYRSPGGYRGGYEAYRVNMRSPGGGFM
SQTHSTHRDPASALYMSRENGYQQSFKRGGGTATHRSSAGWSDSSQVSSPDREGAYPLDS
GISDTLSIPPMEVPITPQGPHTLMPVHVYPLTQLRVAFSAARAANFAPGTLDQPIAFDLL
HTNLGNMFDTTTGRFTCPAAGAYVFIFHILKLAISVPLYINLMRNEEVMVSAYANDGAPD
HETASNHAVLQLFQGDQVWLRLHRGAIYGSSWKYSTFSGFLLYQD
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagactaagatcatggttcagctgtcaccatctcggactatagagacaatgact
ccagagtcgaccgtggagaaggaggatggccagggcagccctaaatccgagtctcctcga
gtgcttaccgccctccagctcgcccttaacccagcctcaaccacatactacggctacgag
aaatacattgaggacggcctcatctgcctcaagcacaagatccgtaacattgagaaaaag
aagctgaaactggaaagctacaacgagaggctgaagaatgggggcaaactaaatcaagac
caactagaagctgtggggaagtacgaggaagtggtccacaatcttgcgtttgccaaagag
ctccagaagaccattggtgccctcacgcaagatttgttgagggctcagcggaaagctgct
cgacaagagaaattgatgaagattgaagaagacaggaaacatctgagcttgatgctccag
gtgcaatacgtcctccacagtctgcagcgagaggacgtccggaggaacttctgcaacacg
agacaacattcctgttacctgtccacacaggacatcaagagtttgctggatctggcaaca
ctattaggatgcaaaagagaccataccatgagtttggaggatcagatggaacaggctgct
attgtttactgggagcttctggaagggaaagaaagaccagttgctggctcaacatataag
cacatgaaggaaaagctactaaagctagtagactctggcttttttgatcatgtaccactt
cctaaagttgacagtcaagtgaagactgagaccctaaagccagaccctccatcaagacct
tgtggcctctccacactgatgaagctgagctcaaaagaagtgccttccaaagagtttctt
aacagacgatacctacctgaaacagacgtcagtgagcgcagacaggatgagaagtcatcg
ccccgtagttggaaggaggagtttttggccatgaaggaaagggagccgccagactcatgg
gaaatggagttttcagatcctcctttgtcctctcagtcccaaatacagaagccatggaag
ggggcagcgggattgattcccaagactgcagacatcgcgaaaagacctaccattgaccca
aaggagaaacgtcaaaggaagagcaaggtggagcaggactctaaaccggtgcctgttgca
gtggaagtctttggctctccatcttcattaccaaaagacccagttcagcgcaaacagcag
ctggagtctctgatggaccagatctcaggatcattcagcttcatgcaggactctcttctg
gatggagaaacttcacccgtaaacggtcaaataaagagatgccgtccatctccaggctcc
tctactcctcttgcacagagggaactaacaaaaagcccatcagatattctgcctcaatcc
cagcatagcactcctttacggatcctgctgtcgggagaggctaaaagctgtctggtgaat
ggagaccgctctataaacagctctgaccttgatctgcaccatgaagagaagccacagaaa
caaggtgagggctttacatctcctccactgtaccgcaggggatcctccatctcagtccct
ttagaaaaccagagcactgtacaggctggaaagcagacgttatgcaatggggtatcaacc
actgtgtctgcaccgacattttccaccccacccagccacagatccatcattgcagacaac
accttccacaacattcattctgtgtttaatgtggcatctttgcccatcagtgagagttca
gggatgaagtcagatgagagtggattctctgagtcaatgcatctgaattacacgtcagcc
aaaacccagaattactccaccgccagcacccagacaccacctgaactcaacctacctgaa
gatgacctacagattgaaagccagtaccagttggagtctcccgtcagtgcaggtggtcac
gtgttttctggccctcagccacagtctcgtctgggtcagtcctgctacccccgcggtaca
gcgagaggtatgacgcgtgcaggcaggggtttgggtcactcatacagatcacctggtggc
tacagaggtggttatgaggcctacagagtgaacatgcgttctccaggagggggcttcatg
tcccagactcacagcactcacagagaccctgcatctgctctttatatgtccagagaaaac
gggtatcagcagagcttcaaacgaggtggaggcacagcaacccataggagcagtgctggt
tggagtgactcctctcaggtgagcagcccggaccgagagggtgcgtatcccctcgactca
ggaatcagtgacacactctccatcccgccaatggaagtgcccatcacgccccagggccca
cacactctgatgccagtacacgtgtacccactcacccaactccgtgttgccttctccgcc
gcccgcgcggcaaacttcgctccaggcacgctggatcaaccgatcgccttcgacctgctg
cacacaaacctcggcaacatgttcgacacgaccacaggccgcttcacctgtcccgctgct
ggtgcatacgtctttatcttccacatcctgaagctggccatcagtgtacccctgtatatc
aacctcatgcgcaacgaagaggtgatggtgtctgcatacgccaacgatggcgctccggac
cacgagactgccagcaatcacgccgtcctccagctgttccagggcgaccaagtttggctg
cgactgcaccgtggtgccatctatggcagtagttggaagtacagcaccttctctggtttc
ctgctgtaccaggactaa
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