Garra rufa (doctor fish): 141332910
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Entry
141332910 CDS
T11039
Name
(RefSeq) guanylate-binding protein 4-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
grf Garra rufa (doctor fish)
Pathway
grf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141332910
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GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
141332910
NCBI-ProteinID:
XP_073693973
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Position
4:36168629..36173425
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AA seq
628 aa
AA seq
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MDKPVCLIDRHSDGKLCVQQSALQILEQIQQPVVVVAVVGLYRTGKSYLMNRLAGKQTGF
ALGSTVESKTKGIWMWCVPHPTKAETTLVLLDTEGLGDVNKGDPKHDTHIFCLAVLLSST
LVYNSRGTIDNKAVMDLQYVTELTECIKVKSSDEDADDSSEFVKFFPIFIWAVRDFTLKL
KIEGKDVTEDEYLEFALKLKRGTSRTVIEYNFPRECIQKYFPSRKCFTFLSPTTPDKMSC
LESLDPADLSSEFLKVTDNFCKFVFHDSRVKKLKDGHTVTGRVLGHLAKMYVDTISSGSV
PCLENAVIAMAMIENEAAVKEGLQVYQSGMEKLKESFPLKLKDVFSEHQHFSNTATQAFM
KRSFKDTDGKYLKSLEDNINKLFDGYLCQNEQASKRRCEDLLSSLSAPMMEKFVQGFYAK
PGGYDLFCNDLEDIGKKYNSQTNKEVKAEEVLEEFLKQKSVDSKSILQADKKLNEREKKI
NEEKENAILLKQEIKAKEEKQRQLEEKMKTERQSNEERMRQIKEKMEEAIRLQIEDAERA
MESKLREKTDLLEKGFKEKAEMMSKEIEEFKRRSAEAETNRAKELALMLENSNKRHEETM
AMVMEQHREQMMAIQQRNPLSLDACCIL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggataagccagtgtgcctcattgacagacactcagatgggaagctgtgtgtgcagcag
tcagcgctacagatcctagagcagatccagcagccggtggtggttgtggccgtggtgggg
ctctaccggaccgggaagtcctacctgatgaaccgtctcgctggaaaacaaacagggttt
gcgctgggcagcacagttgagtccaagacaaagggcatctggatgtggtgtgtgccccat
cccactaaagcagaaaccacgctagtgctgctggacacagagggactcggagacgtgaat
aagggagacccaaaacatgacacccacatcttctgtttggctgtgttactcagcagcact
ctagtgtacaacagtcgagggacgattgacaacaaggctgtaatggatctgcaatatgtt
actgaactaactgagtgcatcaaggtcaaatcatcagatgaggatgctgatgattcaagc
gagtttgtgaagttcttccctattttcatctgggctgtgagggacttcacactgaagcta
aagatcgaaggcaaagatgtaacagaggatgaatacctagagtttgctctgaagctgaaa
cgaggcacttcaagaactgtgatagagtacaactttcccagggagtgcatccaaaaatac
tttccttccaggaagtgcttcactttcctctcgccaactaccccggacaaaatgtcttgc
ctggagagcttagatcctgctgacctttcctctgagttcctgaaggtcacagataatttc
tgcaagtttgtctttcatgacagccgtgtgaagaagctgaaagatggacacacggtcact
ggaagagttctgggtcatctggcaaaaatgtatgtggacaccatctctagtggttctgta
ccatgtctggagaacgctgtgatcgccatggcaatgattgaaaatgaggctgcggtgaag
gagggtcttcaggtttaccaaagtggaatggagaaactgaaggagtctttccctctgaaa
ttgaaggatgtgttctcagaacaccaacactttagtaacacagcaacacaagcctttatg
aagcgttccttcaaggacactgatgggaaatacctgaaatctctagaggacaatatcaat
aaactctttgatggatacctgtgccaaaacgagcaagcttcaaaaagacgatgtgaggat
ctcctgtcatccctctctgcaccaatgatggaaaagtttgtgcagggcttctatgccaaa
cctggtggctatgatctcttctgcaatgatctggaggacattgggaagaaatataacagc
cagaccaataaagaagtcaaggctgaagaggtcctagaggagttcctgaagcagaagtct
gtggattctaaatccattctgcaggctgacaagaaactgaatgagagggagaaaaagatt
aatgaggaaaaagagaatgcaatccttctgaagcaggaaattaaagctaaagaggagaag
cagcgacaactagaagagaagatgaaaacagagagacagagtaatgaagagaggatgagg
cagataaaggagaagatggaagaagcaatcaggcttcagatagaggacgctgagcgtgcc
atggagagtaaactgagggagaagactgatctgctggagaagggctttaaggagaaggca
gagatgatgagcaaagagattgaagagttcaagagacggagcgctgaagctgaaactaac
agagctaaagagttggcactgatgttagaaaactccaacaagagacatgaggaaaccatg
gctatggtgatggagcagcacagagaacagatgatggccatacagcagaggaatcccctc
tctttagatgcttgttgcatcttgtga
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