Garra rufa (doctor fish): 141333024
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Entry
141333024 CDS
T11039
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03320
PPAR signaling pathway
grf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
141333024 (slc27a1a)
09158 Development and regeneration
04382 Cornified envelope formation
141333024 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
grf01004
]
141333024 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
grf02000
]
141333024 (slc27a1a)
Lipid biosynthesis proteins [BR:
grf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
141333024 (slc27a1a)
Transporters [BR:
grf02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
141333024 (slc27a1a)
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
141333024
NCBI-ProteinID:
XP_073694073
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Position
1:26118954..26136524
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AA seq
647 aa
AA seq
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MHYVARGSLSLGSLGLLRLFGASWSWSLAAGLGVYLGTGGWRYLYVAIRTAKRDINGLYV
LLRVKLALWHHIRNRNTIPSIFAKTVAKHPDKPALVYEATGETWTFSQLDQISNAVAHWA
LSQGWTSGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLRRDSLLHCVGVSASRALV
FGAELADAVSEVSSSLSESMVRFSTGDLRPDQMAILKCHPLDSILASTPRHPPPCIVSKG
FNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYHSFRMRPDDIIYDCLPLYHSAGNIM
GVGQCLIHGITVVVKKKFSASRFWEDCIKHNCTVVQYIGEICRYLLSQPVRPSERQHRVR
LAVGNGLRPSVWEAFMERFGVKQIGEFYGATECNCSIANMDGKVGACGFNSRILPNVYPI
RLVKVNEETMELVRDKQGLCVRCQPGEPGLLVGRINQEDPLRRFDGYASQDATRKKIAYN
VFKKNDSAYLSGDVLVMDEFGYMYFRDRSGDTFRWKGENVSTTEVEGTLSSLLGQTDVAV
FGVNVPGVEGKAGMAAIADSTGNFNCNSFLKKIQQALPPYARPIFLRISSCVDTTGTFKI
QKTRLQREGYDPRLTTDQIYFLNSRAGCYELVSEDLYNALEEGRISL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcactatgtggcgaggggctccctgtccttgggttccctgggcctgctccgtctgttt
ggggcatcctggtcctggagcctggcagcaggtttgggtgtttacttaggaactggaggc
tggcggtacctgtatgtggcgattcgtacggctaaaagggacatcaatggtctttatgtg
ctactgagggttaaactggcactatggcatcatattcgtaaccgaaacaccataccctct
atttttgccaaaactgtggctaagcacccagacaagcctgcacttgtgtatgaagccact
ggggaaacatggactttctcccagttagatcagatctccaacgctgtggcccactgggca
ctgagccaaggctggacttcaggagatgtggtggcgctattcatggagagccggccgctc
caagtggcgctttggctcggcctggccaaagtaggtgtggaagctgcactcatcaacttc
aacctccgacgggattcgcttctgcactgtgtgggtgtgtcagcatcccgagcacttgtt
ttcggagcagagctagcagatgccgtgtctgaagtgagctcctctttgagtgagagtatg
gtgcggttcagcactggagacctcagaccagaccagatggccattctgaaatgtcacccc
cttgactccattctggcatctacccctcgacacccaccaccctgtattgtgtcaaagggc
ttcaacgatcgtttgttctatatctacacttctggcaccacaggactccctaaagctgct
atagtggtgcacagtcgatattacaggattgctgctttcgggtaccattcttttcgaatg
cggccagacgacattatctatgactgcttacccctctaccattcagcaggtaatattatg
ggggtgggtcaatgtctgattcacggcataactgtggtagtcaagaagaagttctctgca
agtcgcttctgggaagactgcatcaaacataactgcactgttgtgcagtacattggcgag
atttgccgttacttgctgtctcagcccgtgcgcccctctgagcgacagcaccgtgtgcgt
ttagctgtgggaaatgggctgcggccgagcgtgtgggaggcttttatggagcgtttcgga
gttaaacaaatcggcgagttctatggagccaccgagtgcaactgcagcattgccaatatg
gatggcaaggttggagcttgtgggtttaacagtcgcattttgccaaacgtgtaccccatc
cgactggtgaaagtgaatgaggaaaccatggaactggttcgggacaagcagggactgtgt
gtgcgctgccaacctggagagcctgggttgttggtgggaagaattaatcaggaggatcct
ctgcgtcggtttgacgggtacgctagtcaagatgccaccaggaaaaagatcgcctacaac
gtattcaagaaaaacgactctgcgtatctgtcaggtgatgttttagttatggacgagttt
ggatacatgtacttccgggaccgcagtggtgacacgtttcgttggaaaggtgagaacgtg
tccactactgaagtggagggaaccctgagcagcctgttgggacaaactgatgtagcggtg
tttggagtaaacgtacctggtgtggagggaaaggctggaatggctgccatcgctgactcg
acaggaaactttaactgtaattctttcctgaaaaagattcagcaagctcttcctccatac
gcacggccaatatttctacgcatctcctcttgtgtagataccacaggaacatttaaaatt
cagaagaccaggttgcagagggaaggatacgatccacggctcacaactgaccagatctac
tttctgaactccagagcgggctgctatgagcttgtgagcgaggatctgtacaatgctttg
gaagaaggcaggatatccctttga
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