Garra rufa (doctor fish): 141333302
Help
Entry
141333302 CDS
T11039
Symbol
prdm4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141333302 (prdm4)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
141333302 (prdm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
Zn_ribbon_PRDM4
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-H2C2_5
C2CH-3rd_BIRD-IDD
zf-C2H2_6
DUF7479
Zf-C2H2_ZNF451
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
141333302
NCBI-ProteinID:
XP_073694380
LinkDB
All DBs
Position
4:complement(16704040..16713638)
Genome browser
AA seq
828 aa
AA seq
DB search
MNDMNLSPVGMDQLSVPVSASHLGLPTSPTHNPITTPGMPVAIPSLGPSLGPLPSALSLM
LPMGPLGDRGVMCGLPERNYTLPPPPYPHLESSYFRHILPGILSYLADRPPPQYIHPSSL
NMDGTLSVSNNNPSGLDPYSGPGGPLDQGMVTLDTRQVGGQSSLHQGGSHEVQLDATGLT
MESRVSSPMSPDGMEEDLATMERVVVAESQQQLGTRPQPHEGLAGVDSSGGVMPLHGAGL
ELPVVMEQEHMGGRVGTSNTGAGGPGTLSEALHSAGELNSGVVSVVLTGAMPPQAQLEPV
SLHGPSGMGLEPVNVSPITAEVSLGPDNSLVLVNSTLQLEDSTSNKENMATAFNIWCTLC
ERSYPSDCPEHGPVTFIPDTPIQSRARLSLPRPLCLRISVADEPIGVFARETIPSRTCFG
PMVGQHCSSVELTDWSDKDTPQIWKMFHNDIQEFCIVTTDEHECNWMMFVRKARTTEEQT
LVAYIDNGKLYFCTSREILPDQELLFYYSRDYSRQLGIPRVPEGQICHCGKECASFTEFK
SHLSSHAQSHSPTQDHPTHATHNQSQSQEKVPNEQSRSASSPQWQCHSDVNEHSSSSSSS
NGHGRERKFKCSMCTRAFTTSTKLNVHFMGHMGMRPHKCSYCSKAFSDPSNLRKHLRIHT
GQKNFRCTVCGKSFTQKAHVESHMVIHTGAKNIKCDHCDKMFVRKQDLKQHMYSHSLDRQ
ITCPKCDKQFLKTDHLKKHLNSHDGKRDFICEKCNKGFLTKYHLTRHLKICKGPKIGRGA
AQGDEGEEEEDEEEEDEEEEREAEGRINPANEEECGIGMRGYTSEKTM
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacatgaacctcagcccagtgggcatggaccagctcagcgtgcctgttagtgca
agtcacctcggcttacccacatccccaacgcacaatcccatcaccactccaggcatgcca
gtcgctataccaagtttaggtccgtcacttgggcctcttccttctgcactatccctgatg
ttacccatgggtcctttaggagacagaggtgttatgtgtggccttccagagagaaactat
acattaccacctcctccatacccacacctggagagcagctactttagacacatccttcca
ggtattctgtcatatctggcggatcgtccccctccccaatacattcatcccagcagcctt
aacatggatgggactctttctgtgtccaacaacaacccctctggcttagacccgtacagc
ggccccggcggccctctagaccaaggcatggtaacccttgacacaagacaggtcggaggc
cagtccagtctccaccaaggaggctctcacgaagtacagctagacgccacaggactaacc
atggagtcacgtgtaagtagtccgatgtctcctgatggaatggaagaggacttggccacc
atggagcgtgtcgtggtggcagagtcccagcagcaactgggtaccagacctcagcctcat
gagggtttagcaggtgtggactcctcaggaggtgttatgcccctgcatggagcagggctg
gagctcccagttgtaatggagcaagagcacatgggcggcagagtgggaaccagcaataca
ggagcaggcggcccaggaactttgagtgaagccttgcactctgctggagaactaaactct
ggggtggttagtgtggtgctcacgggagccatgccgccacaagctcaattagaaccggta
tctctacatggaccttcaggaatgggactcgagcctgtaaatgtgtcacccatcaccgca
gaagtgtctcttgggccggacaacagtctagtgctggtgaactctacattacaactagaa
gactcaacatctaataaagaaaacatggccactgccttcaacatatggtgcactttatgt
gagaggtcatatccgtcggactgccctgagcatggacccgtcacattcatcccagacacg
cccattcagagcagagcccgcctctctctgccccgccccctgtgcctccgcatttctgta
gctgatgaaccaatcggagtgtttgctagagagaccataccctccaggacttgctttggg
ccaatggttggacagcactgtagcagtgttgaacttacagactggtctgacaaggatact
ccacaaatatggaagatgttccacaacgatatccaagagttttgtatcgtgacgacagat
gagcatgaatgcaactggatgatgtttgtacggaaagcaaggactacagaggagcagact
cttgtggcatatattgacaacggaaagctgtatttctgcacatccagagagattctgcca
gatcaagagctgttgttttattacagcagagactacagcagacagctaggtataccgaga
gtgccagagggccagatatgtcattgtggaaaagaatgtgcctcttttacagagtttaaa
tcccaccttagcagccatgcacagagccacagccccacccaggaccacccgactcacgct
acacacaaccaatcccagtcgcaggagaaggtacccaatgaacagtctcgctctgcttcc
tctccacagtggcagtgccactccgacgtgaatgaacattccagcagtagcagcagcagc
aatggacacggtcgggagaggaagtttaaatgcagcatgtgtacacgagcgttcactacg
tctactaagctaaatgtgcatttcatggggcacatgggcatgagaccgcacaagtgtagc
tactgcagcaaagccttcagtgatcccagcaatctcagaaaacacctgagaatccacaca
ggtcagaagaacttcaggtgtacagtatgtgggaagtcttttactcaaaaagcgcatgtg
gaatcgcatatggttatacacactggtgccaagaacattaaatgtgaccattgtgacaag
atgtttgtgaggaaacaagatctcaaacaacacatgtattcacattcactagaccgccag
ataacttgtccaaagtgtgacaaacaattcttaaagaccgaccatcttaaaaaacacttg
aactctcacgacggcaaacgggacttcatctgtgaaaagtgcaacaagggcttcctcact
aaataccacctcacacgccacctcaaaatctgcaagggtcctaagatcggtcgaggggcg
gcgcagggtgacgaaggggaggaggaggaagacgaggaggaagaggatgaggaagaagag
agggaagctgaaggacggatcaatccagccaacgaggaggagtgtggaataggcatgaga
ggatatacttcagagaaaacgatgtaa
DBGET
integrated database retrieval system
