Garra rufa (doctor fish): 141333308
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Entry
141333308 CDS
T11039
Symbol
cdhr5-rs
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141333308 (cdhr5-rs)
Cell adhesion molecules [BR:
grf04515
]
Cadherins
Cadherin related
141333308 (cdhr5-rs)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Stevor
Cadherin_CELSR2_9th
CydS
Motif
Other DBs
NCBI-GeneID:
141333308
NCBI-ProteinID:
XP_073694385
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Position
4:complement(21381828..21405679)
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AA seq
759 aa
AA seq
DB search
MLTPWRLFLCQMALNIFYHIAKASLCLGGQDIFATVRENSPTGEFIANLSINGDPGASSI
RLCLTGENADWFYLEGRTIRLNASFSRTLDREVLGSVLIAALTCYEDDIIRSRYRIMVEI
LNENDNMPYFLEDTIQPRYISELVTVNSMVFTVKAKDGDGDTITYMTDKSMADASYFRID
LPNSGMVILDKPLDYETKTQLQLVIFAVETSTKEKYSTTATVTVNVLDGDDQYPQFQPCA
PVYEDGDICTNPVYSVNITETDEDAVLYFSPGPIHAEDGDKDIMTPLVYSILSGDENGRF
TIDSKTGEISLRQRVENRLLTPSFRLRIMAAQVNDPKKYSVATALVRVVSENRFPPFFNK
TVYKGFLIESSSPATLVTTYGNQVLVVQAIDRDFRDGINPKIHYTMQPLTGSNKLYHITQ
DGIVIAKTDRLRAFNRHILEVIATDEESGETAHASVDIEVLQRGQPVPRSPFGEERLFGD
MNAGMAGGIAALVLIVAVTVLFLFLWLAKRRRERRDPADRGAVALGKHPNVSLRWFQLVN
SGRPISLIEDASYHNEAFVDHEYPSDLYTKKDDMLPPSTRTYESDRPMPLQDMLPILVLP
EITPTKISSASLTNGKAFIKSVSFRDEVAQETRPKNEGQIVVVCNEIETRGDILTPVTEE
DTFTIATVENPAEKVDICSPNPSVRPREEYMFAHANVDDEDDSDPYKTMASVIYSSDEDT
ADDEPNDLRHYYKHGQNQFTIDHMKAIGLQIEDSDESQA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgccatggagattgtttctctgccagatggcactgaacatattctatcacatc
gcaaaagccagtttatgccttggtggtcaagacatatttgccacggtcagagagaacagt
cccaccggagagttcatagccaacctcagtatcaacggggacccgggagccagtagcatc
cgcctgtgtctcacaggagaaaacgctgattggttttaccttgaaggccgaacaatccga
ctcaacgcgtcgttttcaaggaccttagatcgagaggtgctgggatcagttctgatagct
gctttgacatgttatgaagatgatataataaggagtcgatatcgaatcatggtggaaata
ctaaatgaaaatgacaacatgccatatttccttgaagacaccattcaaccacgatatata
agtgagttggtgactgtaaactcaatggtgttcacagtgaaagctaaagacggcgatgga
gacacgatcacttatatgaccgacaaatctatggctgatgccagctattttaggattgat
ctgcccaacagtgggatggtgatcctggataaaccgttggactatgagactaaaacccag
ctgcagttggtcatatttgctgtggaaacaagcacaaaagagaagtacagcacaacagct
acagtcaccgtgaatgttttagatggtgatgaccagtatcctcagtttcagccatgtgca
cctgtatatgaagatggagatatctgcaccaaccctgtgtacagtgttaacatcacagag
acagatgaggatgctgtgctttatttttctccgggtcccattcatgctgaagacggagac
aaagacataatgactcctctagtctacagtattctctcaggtgatgaaaatggcagattt
acaatcgactctaaaacaggagagatctctctcaggcaacgcgtggaaaacagactcctc
acaccttcattcagactgcgcataatggctgcacaggtgaatgaccctaagaaatattcg
gtggcgacggcactggttcgtgtggtgtcggaaaaccgatttcctccgttcttcaacaag
accgtctacaaagggtttctcatcgaaagctccagccctgccacactggtcactacctat
gggaaccaagtcctggtagtccaagccatcgacagggacttcagagatggaatcaaccca
aaaatacattacacaatgcagcccttgacaggtagcaataaactgtaccacattacccag
gatggcattgtgattgcaaagactgaccggctcagagcattcaaccgacacatcctggag
gtgattgcaacagatgaagagtcaggagagacagcccatgcttcagtggatattgaagtt
ctgcagaggggacaaccagttcccagaagtccatttggcgaggagcgtctgtttggagat
atgaacgcagggatggccggcggcatcgctgcccttgttctgatagtggctgtgacagta
ctatttctcttcctctggctggccaagagacggagagagagacgggacccagcagacagg
ggtgcagtagcccttgggaagcacccgaatgtgagcttaagatggtttcagctggtcaat
tcaggacgtcccatatcgctcatagaggacgcctcctaccacaacgaggcgttcgttgac
catgagtaccccagtgatttgtacaccaaaaaagatgacatgcttcctccatcaaccagg
acatatgagtctgacagacccatgcccctgcaagacatgctgcccatcctagtgcttcca
gaaataacacccacaaaaatctcatctgcatctctgaccaatgggaaagctttcataaaa
tcagtctcttttagagacgaagtagcacaggagacccggcccaaaaatgaaggacaaatt
gtagttgtatgtaatgaaatagagaccagaggggacattttgacacctgtcacagaggag
gacactttcactatcgctacagtagaaaatcctgcagaaaaggtggacatttgtagtcca
aatccttctgtaagacccagagaggaatatatgttcgctcatgctaatgtggatgatgaa
gacgacagtgatccatacaaaaccatggcctctgttatttacagcagcgatgaagataca
gcagacgatgagcctaatgatttaaggcactattacaaacatgggcaaaaccagtttaca
atcgaccacatgaaggccattggattacaaatcgaggattcggatgaatcccaagcctga
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