Garra rufa (doctor fish): 141333396
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Entry
141333396 CDS
T11039
Symbol
rpap3
Name
(RefSeq) RNA polymerase II-associated protein 3
KO
K23002
RNA polymerase II-associated protein 3
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
grf03021
]
141333396 (rpap3)
Transcription machinery [BR:
grf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
141333396 (rpap3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_11
TPR_14
TPR_19
TPR_16
TPR_BSK1_C
TPR_12
TPR_9
TPR_17
ANAPC3
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
141333396
NCBI-ProteinID:
XP_073694480
LinkDB
All DBs
Position
4:2953239..2962150
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AA seq
597 aa
AA seq
DB search
MSGNKAVELQIQMRQNAEDLQNFMKELNNWEEEIKKKDQQLRTGNISEPPKTLPPVRNKE
YKKTKKRVKRQTNGEQTETRRIKSYDYQAWDKFNVEKTLEAMDAEESPVQSNESDSEGLQ
VDRDLALTEKEKGNEFFRDGRYDSAIECYTRGMDADPYNPVLPTNRAACFFRLKKFSVAE
SDCNLAIALDGKYVKAYVRRAAARTALNKHQEALEDYEMVLKLDPGNSEAQTEMQKLQQV
LESSGQTTEKSKSDAEPTVDPLQQQRLQEQQRKQEAVLQKDRGNAYFKEGKYEAAVECYS
RGMEADGTNALLPANRAMAYLKLQRYSEAEQDCSAALALDATYAKAFARRATARAALGKI
REAKEDFEQVLKLEPGNKQAMSEIEKLSAEMSTSGLLAPEENKQRRTVQPINKPEHLRST
KPLRRIDIQEVGGEITPSTSAVTSSPHPKIQKIEEISDTPVSRAPEDSSADVEWIPPPPS
NSFQLEADLRKISRQPQSTYTYLKQISPDAYPKIFQNSLEPDVLNLILKTFHSCFQHEDA
SLLLAVLRKLASVRRFDMAVMFMSSAEKKILQELFDWIDSTGLGDASVTDLQKKYGL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaaataaagcggtggagctgcagatacagatgcgacagaacgcagaagatctg
cagaactttatgaaggagctcaacaactgggaggaagaaatcaagaaaaaagaccagcag
cttcgcaccggaaacatcagcgaaccgccgaaaacactcccgccggtgaggaacaaagag
tataagaagacgaagaagagggtgaagcggcagactaacggcgagcaaacggaaacacgt
cgcataaaatcctacgattatcaagcctgggacaaatttaatgtggaaaagactctggag
gccatggatgctgaggagagcccggtccagtccaacgaatctgactctgaagggcttcag
gtggacagagatctggcactgactgagaaagagaaggggaatgagttcttcagggacggc
cgatacgacagcgccatcgagtgttacaccagaggaatggatgccgatccatacaacccc
gtcctgcccaccaacagagcagcttgcttcttcagactgaaaaagttctctgtggccgag
tctgactgtaatttggccatcgctctggatggtaaatacgtcaaagcgtacgtcaggaga
gcggccgcccgcacagccctcaacaaacaccaggaagctcttgaagattatgaaatggtt
ctcaaactggatcctggaaactccgaggcccagactgagatgcagaagctccagcaggtg
ttggaatcgagcggacagacgacagagaagagcaagagcgacgcagagccaacggtggac
ccattacaacagcagcggctgcaggaacagcagaggaaacaggaagcagtattgcagaaa
gacagaggaaatgcttactttaaagaaggcaagtatgaggcagcggtggagtgttactcg
agaggaatggaggcggacgggacgaacgctctgctgcccgctaacagagccatggcgtac
ctcaaactccaaaggtacagcgaggcggagcaggactgcagcgcggctctcgctctggac
gccacatacgccaaagccttcgccagacgagccacagccagagccgctctaggcaagatc
agagaggccaaagaagattttgagcaggttctgaagctcgagccgggaaacaaacaagcc
atgagtgagatcgagaaactctcagcggagatgagcaccagcggtcttctagctccggag
gagaacaaacagaggagaaccgtccagcccatcaacaaacctgaacatctcagatccacc
aaacccttgaggaggattgacatacaggaagtgggtggagagatcacaccgtcaacatct
gctgtcacgtcttcaccacatcccaagatccagaagattgaggagatctcagacactcct
gtgtccagggctcctgaagattcgtctgcagatgttgaatggattcctcctccacccagc
aacagctttcagctggaggccgacctcaggaagatcagccgtcagccacaatccacttac
acatatctgaagcaaatcagtccagatgcttatccgaagatctttcagaactctctggaa
cctgatgttctcaacctcatcctcaagaccttccacagctgctttcaacacgaagatgcg
tctcttctgctggccgtcctgagaaaactggcgagcgtgaggagattcgacatggccgtc
atgttcatgtcatctgccgagaagaaaatcttacaggagctgttcgactggattgacagc
accggtctgggagacgcttctgttacagacttacagaagaaatacggcctttga
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