Garra rufa (doctor fish): 141333446
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Entry
141333446 CDS
T11039
Symbol
rint1
Name
(RefSeq) RAD50-interacting protein 1
KO
K20474
RAD50-interacting protein 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141333446 (rint1)
Membrane trafficking [BR:
grf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
141333446 (rint1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Rab5-bind
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
141333446
NCBI-ProteinID:
XP_073694563
LinkDB
All DBs
Position
4:complement(20080312..20091422)
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AA seq
781 aa
AA seq
DB search
MAAPMMEHNNHSNNDLSPLNRTDRSKSESSSEDGNFTDDVVELVQKEIGGDLKSLKKVSG
LLEKLTLENKQLEEQVLTVSSSVPLRVSAALSAAEESRVKLEALQEKERLLSNTLQQHLQ
GAQVWADSIGQVLGQLDTLERHMKYLQCLARIEELSDSIQQYLMTNSVWDAVGAIDRMAS
LDMGLRESGCSHLQAFLRETLRFWHKILKDKLASDFEEVLTQFHWPFISPPTQTLSPPAN
AQELNSQLELLVSQLLSLQTSDDLTAEKKETPARPGQSQATPLSLPIQIMLLPLSKRFRY
HFTGNRQTNNLSKPEWYLTQVLIWMGNSSNFMDEKIQPILDRAGAKVNARVELCRGLLTL
AQEKLTHDAPRLLYDDALFCHLVDEVLQFEKELRSTHSYPRAYPGVLHILLEETVFQKWL
SVERKMAVEKVDAMLSTEGAWSSQYKDITDMDELKAPDCAETFMTLLLVITERYRSLLCP
RAQLSFLALQKELVDDFRIRLTQVMKEESRQPLSPRYCAILNAANYISTVLSDWGDNVFF
LQLQQAAVSVGEEILGPLGATETGRLASLEGSLFEALLALLERLRGDMLGRLLDAVMRDV
KEKAQPYCKDRWISLPSQSEQATMSLSSSACPMMLCLRDHLLQLQQMLCLPLFQMFWQGL
AERLDSFIYEDLILYNHFNEGGAAQLQYDMTRNLFPLFGHYCKRPENFFKHVKEACLILT
LKVGPALLLCDVLKQSEEDEGLLNHQQPSPESALNELGIYKLAPGDVQILLNLRSAWLSQ
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcctatgatggagcacaacaaccacagcaacaatgatctttctcctctaaac
cgtacagataggagtaaatctgaatcttcttcagaggatggaaactttacagatgatgta
gttgaacttgttcagaaagagataggtggcgatcttaagtcgctgaagaaggtgtcaggg
cttttggagaaattgacattagagaacaagcagctggaggagcaggtgctgactgtgtcc
tcttcggtgccgttgcgtgtgtccgccgctctgtccgcggcagaggagtctcgagtaaag
ctggaggctttacaggagaaggagagacttttgtccaacactttgcagcagcatctgcag
ggcgcacaagtctgggccgacagcatcgggcaggtcttgggtcagctagacacattagaa
aggcatatgaagtatcttcaatgtctggctcgtattgaagagctcagtgacagtatccag
cagtatctgatgaccaatagtgtgtgggatgcggtcggtgcaatagacagaatggcctct
cttgatatgggtttgagagagtcaggctgtagccacctgcaggctttcctcagagaaaca
cttcgcttttggcacaagatccttaaagacaaactggcaagtgattttgaggaagtcctg
acgcagttccactggccgttcatctcacccccaacacagaccctctctcccccagccaac
gcacaagagctcaacagccaactggagctactggtctctcaacttctctctctccagacc
tccgatgaccttacagcagagaagaaggaaacaccggctcgtcctgggcagtcccaggct
actccactatcattgcctattcagatcatgctgcttcccctcagtaagaggttcaggtat
cactttaccggaaaccgccagaccaacaacttaagcaagccagagtggtatttaacccaa
gtcctcatttggatgggaaacagctccaactttatggacgagaagattcagcctatattg
gatcgtgctggggccaaagttaatgcaagggtggagttgtgcagagggctcttgactctg
gcccaggagaagctcacccatgacgctcctcgattgctctatgacgatgctctcttctgc
cacctagtggatgaggtgctgcagtttgaaaaagagctccgcagcacccacagttacccg
cgtgcctaccccggggtcttgcacatactgctggaggagaccgtgttccagaagtggctg
agtgtggagagaaagatggctgtggaaaaagtggatgccatgctgtctacagaaggagcc
tggagctctcagtacaaagacatcactgatatggatgagctcaaagcaccagattgtgca
gagaccttcatgacccttctgctggtcatcacagaacgctaccgctctctgctgtgtcca
agggctcagctcagtttcctggctttgcagaaggagctggtggatgatttccgtatccgg
ctcacgcaggtcatgaaagaagagtcccgacagccacttagccctcgctattgcgccatc
ctcaacgcagccaactacatctccactgttctcagtgattggggggacaatgttttcttc
ttgcagttgcagcaggctgctgtgtcagttggcgaggagatcctaggtcctcttggggcc
acagagacggggcgtctggcctctttggaaggatctttgtttgaggccctgctggccctg
ctggaacggctaagaggagacatgctgggacgattattggatgcagtcatgagagacgtc
aaagaaaaggcacagccatactgcaaggacaggtggatttccttgccgtcacagagcgaa
caagccactatgtcgttatcgagctctgcatgtcccatgatgctttgcctacgggatcac
ctgcttcagctgcagcagatgttatgtcttcctctgtttcagatgttctggcagggcctc
gccgagaggctagacagcttcatctacgaagacctgatcctgtacaaccatttcaatgaa
ggtggggcggcacagcttcaatacgacatgaccagaaacctcttccctctgtttggacac
tactgcaagagacctgaaaacttcttcaaacatgtgaaggaggcctgcctcatcctgact
cttaaggtcggtcctgcattgctgttgtgtgatgtgttgaagcagtcagaggaagatgag
ggccttctgaaccatcagcagcccagtccagaatcagcgctcaatgagctaggcatctac
aagctggcccccggtgatgtgcagatccttctcaacctccgctcagcctggctcagccaa
tcataa
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