KEGG   Garra rufa (doctor fish): 141333478
Entry
141333478         CDS       T11039                                 
Symbol
cald1a
Name
(RefSeq) caldesmon 1a
  KO
K12327  caldesmon
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:grf00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    141333478 (cald1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:grf04812]
    141333478 (cald1a)
Cytoskeleton proteins [BR:grf04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     141333478 (cald1a)
SSDB
Motif
Pfam: Caldesmon
Other DBs
NCBI-GeneID: 141333478
NCBI-ProteinID: XP_073694591
LinkDB
Position
4:complement(7853980..7908515)
AA seq 548 aa
MDDDFERRRELRRQKREEMRLEAERMAYRRSEEDEEEAARERRRRARQERMRGKDSEDVA
YQPETPELNNSHSVTVTESVSTSVVTSSGTGDDEEEQALLERLAKREERRQRRMKEALDR
QQEEESSQPSRYSLEESSSSLRRGRSYEPEEEHNNKEEEKEEVKQVEEEEEEEEVIPREE
VVVEEKPRRSYLREQESVEEISKIPDEDDNERDAVPSSEAHEVVINEDVDDSAVVSETEG
GTAELTAGVQEEKSEIEGLTENGVEEMREAENFEKDEVSENDESLMEDEDVMRKNKQPNG
GVCEDSTPKHKKAERTFSRGSLRSPEAPEADEADSEDARLEAERKLEELKRRRDEMESEE
FERMRLKQQEAEVELEELKRKREERRKVLDEEERQRKQEEAERKAREEEEKRRMKEEIEK
RRAEAAEKRQKVEDSVDGETKKPFKCVSPRGSSLKIGERAEFLNRSAQKSSVKASHTPVV
SKIDNRLEQYTSAVQGNKEVRSPRSAAIDLPMVTDGIRNIKSMWEKGNVFSSGGSPASTN
KVCDVHSH
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggatgatgatttcgagcggcgcagggagctgaggagacagaagcgggaggagatgcgt
ctggaagccgagagaatggcgtatcgccggagtgaggaggatgaagaggaggccgctcgt
gagcgcagacgaagagcgcggcaggagagaatgcgcggtaaggacagcgaggatgtggcc
taccaacccgagaccccggagcttaacaacagccacagtgtgacggtgacagagagcgta
tccacctcagtggtgacctccagtgggacaggagacgatgaagaggaacaggccctgctg
gagcgcctggccaagagagaggagcgcaggcagaggaggatgaaagaagcactggacaga
cagcaggaggaggagagcagccaaccatcccgctacagcctggaggagagcagcagcagc
ctgcgccgtggccggagctacgagccagaggaagagcacaacaacaaggaggaggagaaa
gaggaggtgaaacaggtggaagaggaggaagaggaagaggaggtcatccctagagaagag
gtggtggtggaggaaaagccacggaggtcttatttgagagaacaggaatccgttgaggaa
atatctaaaatacctgatgaggatgataatgagcgagatgctgtgccttcttccgaagca
catgaggtggttattaatgaagacgtagatgattctgcagtggtttcggagacggaaggt
ggcaccgcagagctcactgcaggtgtacaggaggaaaagagtgagatagagggattgaca
gagaacggagtggaggaaatgagagaggcagaaaactttgagaaagacgaggtttcagaa
aatgacgagtctttgatggaagatgaagatgtgatgaggaagaataaacagcccaatggt
ggagtgtgtgaggacagcactcccaaacacaagaaagctgagaggactttcagccgaggc
agcttgcgctctcccgaggcgcccgaggcggacgaggcagacagcgaggatgctcgcttg
gaggccgagagaaagctggaggaactaaagaggagaagagatgagatggagagcgaggag
ttcgagaggatgaggctgaaacagcaggaggccgaggtggagctggaggagctgaagagg
aagagggaggagaggaggaaggtgctggatgaggaggagcggcagaggaagcaggaggag
gccgagaggaaagccagagaggaggaggaaaagaggaggatgaaggaggagatcgagaag
agaagagcagaggccgctgagaagaggcagaaagtggaggattcggtggacggagagacc
aagaagccctttaagtgtgtcagtcccagaggatcctccctgaagatcggtgagagggca
gaatttctcaacagatcagcacagaagagttctgtgaaggcgtctcacactcctgtggtg
tctaagattgataaccgattagagcagtacaccagcgcagtgcagggcaacaaagaggtc
agatctcccagatcagctgccatagatcttcccatggtgacggacggtattcgcaacatc
aagagcatgtgggagaaggggaatgtcttcagctctggtgggagcccagcatccaccaac
aaggtctgtgatgttcattcacattaa

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