Garra rufa (doctor fish): 141333478
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Entry
141333478 CDS
T11039
Symbol
cald1a
Name
(RefSeq) caldesmon 1a
KO
K12327
caldesmon
Organism
grf Garra rufa (doctor fish)
Pathway
grf04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
141333478 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141333478 (cald1a)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
141333478 (cald1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
141333478
NCBI-ProteinID:
XP_073694591
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Position
4:complement(7853980..7908515)
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AA seq
548 aa
AA seq
DB search
MDDDFERRRELRRQKREEMRLEAERMAYRRSEEDEEEAARERRRRARQERMRGKDSEDVA
YQPETPELNNSHSVTVTESVSTSVVTSSGTGDDEEEQALLERLAKREERRQRRMKEALDR
QQEEESSQPSRYSLEESSSSLRRGRSYEPEEEHNNKEEEKEEVKQVEEEEEEEEVIPREE
VVVEEKPRRSYLREQESVEEISKIPDEDDNERDAVPSSEAHEVVINEDVDDSAVVSETEG
GTAELTAGVQEEKSEIEGLTENGVEEMREAENFEKDEVSENDESLMEDEDVMRKNKQPNG
GVCEDSTPKHKKAERTFSRGSLRSPEAPEADEADSEDARLEAERKLEELKRRRDEMESEE
FERMRLKQQEAEVELEELKRKREERRKVLDEEERQRKQEEAERKAREEEEKRRMKEEIEK
RRAEAAEKRQKVEDSVDGETKKPFKCVSPRGSSLKIGERAEFLNRSAQKSSVKASHTPVV
SKIDNRLEQYTSAVQGNKEVRSPRSAAIDLPMVTDGIRNIKSMWEKGNVFSSGGSPASTN
KVCDVHSH
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatttcgagcggcgcagggagctgaggagacagaagcgggaggagatgcgt
ctggaagccgagagaatggcgtatcgccggagtgaggaggatgaagaggaggccgctcgt
gagcgcagacgaagagcgcggcaggagagaatgcgcggtaaggacagcgaggatgtggcc
taccaacccgagaccccggagcttaacaacagccacagtgtgacggtgacagagagcgta
tccacctcagtggtgacctccagtgggacaggagacgatgaagaggaacaggccctgctg
gagcgcctggccaagagagaggagcgcaggcagaggaggatgaaagaagcactggacaga
cagcaggaggaggagagcagccaaccatcccgctacagcctggaggagagcagcagcagc
ctgcgccgtggccggagctacgagccagaggaagagcacaacaacaaggaggaggagaaa
gaggaggtgaaacaggtggaagaggaggaagaggaagaggaggtcatccctagagaagag
gtggtggtggaggaaaagccacggaggtcttatttgagagaacaggaatccgttgaggaa
atatctaaaatacctgatgaggatgataatgagcgagatgctgtgccttcttccgaagca
catgaggtggttattaatgaagacgtagatgattctgcagtggtttcggagacggaaggt
ggcaccgcagagctcactgcaggtgtacaggaggaaaagagtgagatagagggattgaca
gagaacggagtggaggaaatgagagaggcagaaaactttgagaaagacgaggtttcagaa
aatgacgagtctttgatggaagatgaagatgtgatgaggaagaataaacagcccaatggt
ggagtgtgtgaggacagcactcccaaacacaagaaagctgagaggactttcagccgaggc
agcttgcgctctcccgaggcgcccgaggcggacgaggcagacagcgaggatgctcgcttg
gaggccgagagaaagctggaggaactaaagaggagaagagatgagatggagagcgaggag
ttcgagaggatgaggctgaaacagcaggaggccgaggtggagctggaggagctgaagagg
aagagggaggagaggaggaaggtgctggatgaggaggagcggcagaggaagcaggaggag
gccgagaggaaagccagagaggaggaggaaaagaggaggatgaaggaggagatcgagaag
agaagagcagaggccgctgagaagaggcagaaagtggaggattcggtggacggagagacc
aagaagccctttaagtgtgtcagtcccagaggatcctccctgaagatcggtgagagggca
gaatttctcaacagatcagcacagaagagttctgtgaaggcgtctcacactcctgtggtg
tctaagattgataaccgattagagcagtacaccagcgcagtgcagggcaacaaagaggtc
agatctcccagatcagctgccatagatcttcccatggtgacggacggtattcgcaacatc
aagagcatgtgggagaaggggaatgtcttcagctctggtgggagcccagcatccaccaac
aaggtctgtgatgttcattcacattaa
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