Garra rufa (doctor fish): 141333506
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Entry
141333506 CDS
T11039
Symbol
slco1c1
Name
(RefSeq) solute carrier organic anion transporter family member 1C1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
grf Garra rufa (doctor fish)
Pathway
grf04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
141333506 (slco1c1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
grf02000
]
141333506 (slco1c1)
Transporters [BR:
grf02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
141333506 (slco1c1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Sugar_tr
Kazal_1
Motif
Other DBs
NCBI-GeneID:
141333506
NCBI-ProteinID:
XP_073694632
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Position
4:complement(5125892..5166803)
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AA seq
714 aa
AA seq
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MPRNCIRETSPKENEIFLWKMDPPHKERRSPENGPSSARPCCSSLKMFLVALSFAYFAKT
LSGSYMKSTITQLERRFDIPSYLIGVIDGSFEIGNLLVIAFVSYFGAKLHRPKIIAIGCL
LMSLGTFLIALPHFIIGRYKFETSIRSSVNSSSNLSPCPVRPTDLATGPSPTSGPSSGCE
HESRLSMWIYVFLGNILRGIGETPVQPLGISYIDDHALEENAAFYIGCVQTISVVGPVFG
YILGSICAKIYVDIGFVNMESISITPGDARWVGAWWLGYLIAGFITLLSAVPFWFLPKSL
PLPERRLAKYSPERTSFIKDSPLLEHKYQADEPANFLEMAKDFMPTLRSLLGNPVYFLYL
CVTIIQFNSLIGMVTYKPKYIEQHYGQSAYKANFLMGVINIPAVALGMFSGGVIMKKFKL
SIMGAAKFALGTSLLGYFLSLFFFAMGCENASVAGITRSYNGTESLYKADSPLWASCNTN
CKCPETSWDPVCGENGLTYVSPCLAGCRTSHGSGMDTVFEQCSCIAVGNHTASAGQCNNR
DDCHRVFPYFLALSVITSFIISLGGTPGYMLLIRCIRPQLKSLALGFHTLTTRTLAGIPA
PIYFGAIIDTTCLKWGQKKCGGRGACRIYNTTAYRIAYLGLTLGLRTASFFLCILGLVVL
RRHVRRQERNTLANGGTGAAAGELQALRKEENNSCNSDQCPRTADYDPERETRL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaaactgcattagagagacgtcacccaaagaaaacgagatctttttgtggaaa
atggacccgccgcataaggagagacggtcgccggaaaacggccccagctcggctcggccc
tgttgctcaagcctcaagatgttcctcgtggccttgtcctttgcctacttcgccaagaca
ttatccgggagctatatgaaaagcacaataactcagctggaaagacgcttcgacatcccc
agttacttaataggtgtcattgatggcagctttgaaataggtaacttgttagtgatcgcc
tttgtgagttactttggtgccaaacttcaccgtccgaagatcatcgccatcggctgcctg
ttgatgtcgcttgggacttttctaattgccttgccccattttataatcggacgctacaag
tttgaaacatcgatccgatcgtcagtgaactccagcagtaacctctctccatgtccagtg
aggcctaccgatctggccacaggtcccagccctacttcaggaccgagctcaggttgtgaa
catgagtccaggttgtccatgtggatctatgtttttctagggaatattttgcgaggaatc
ggcgagaccccagtgcaacctttgggaatctcatacatcgacgatcacgctctggaggaa
aacgcagccttctacattggatgcgtccagacgatatcagtcgtcggtccggtgtttggc
tacattctggggtccatctgtgccaagatatacgtggacattggatttgtcaacatggag
agcattagcatcaccccgggagatgcacgctgggtaggcgcctggtggctgggatacctt
attgcaggattcatcaccctgctctcggccgtgccgttttggttcttgcccaagtctttg
cccctgccagagagacggcttgccaagtattctccagagcggaccagcttcatcaaagac
tcgcccctgctggagcacaagtaccaggcggacgagccagctaacttcctagaaatggcc
aaagactttatgccaacgctgaggtcccttttggggaacccagtctactttttgtatctc
tgcgtgaccatcatccagttcaactctttgatcggtatggtgacgtacaagccaaaatac
atcgagcaacattacggacagtcggcatacaaagccaacttcttaatgggagtgatcaac
atcccagccgtagccttgggaatgttctcggggggtgtgatcatgaagaagttcaagctg
agcatcatgggagcagccaagtttgcactgggaacgtctcttctgggctatttcctgtcg
cttttcttcttcgccatgggatgtgagaatgccagcgtggccggcatcaccaggtcgtac
aatgggacggaaagtctgtacaaagcggacagtcctctgtgggcgtcgtgcaatacaaac
tgcaagtgtcccgaaacgagctgggaccccgtgtgcggcgagaacggcctcacctacgtc
tccccctgcctggctggatgccggacgtcccacggctcaggaatggacacggtgttcgag
cagtgcagttgtatagcagtcgggaatcacacggccagcgcgggccaatgcaacaacaga
gacgactgtcatcgagtcttcccctacttcctggctctgtctgtcatcacttcctttatc
atctcgctgggcggaacgccaggatacatgctgctcatcagatgcatcagacctcagctg
aagtctttagctctgggttttcacacattgacgacacgcactctagctggaattccagct
ccaatatacttcggagccatcatagacaccacctgtctgaaatggggtcagaagaaatgc
ggtgggagaggagcctgtcgaatctacaacaccactgcctacaggatagcatatctaggc
ctgacgctgggcttacggaccgcttccttcttcctgtgcattctcgggctggtggtgtta
cgacgacacgttcgacgacaagagcgcaacacgctggcaaacggaggcacgggagcagcg
gccggcgaactgcaggctctcaggaaagaagaaaacaacagctgtaactcggaccaatgc
ccgcggacggcagattacgacccggaacgggagacgcgtctgtga
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