Garra rufa (doctor fish): 141333560
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Entry
141333560 CDS
T11039
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
grf Garra rufa (doctor fish)
Pathway
grf04137
Mitophagy - animal
grf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141333560
04137 Mitophagy - animal
141333560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141333560
Membrane trafficking [BR:
grf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
141333560
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
141333560
Autophagy
Mitophagy
PINK1-Parkin associated proteins
141333560
Xenophagy
Cargo receptors
141333560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
TMF_DNA_bd
DUF7310
FlaC_arch
PUMA_CC
zf-C2H2
ATG16
EDR4-like_1st
Motif
Other DBs
NCBI-GeneID:
141333560
NCBI-ProteinID:
XP_073694702
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Position
4:9434969..9441000
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AA seq
519 aa
AA seq
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MASGSSMMNGDINHPGRSGPGNLGSLEETIEQMNTLIKENRELKEALKQTNLSMKERFEG
LSAWKEKQKEERDFLEQRLEEAKTRLNTMDAENEALKKRVEELEKSGAEGLHTELEALRG
QITRLQAEKNDLVALNSELQLKTGQGSPRDSFIEIRIAEDELKMTNAPKELSAFSMPKAE
SEEQTVRQLLRSLRAETDEKERLQLTLQEARERIAELEKRLECADSSAQTSLPCTTDINA
SAEVKNLEDQLLKLCNELKQAQVKLDEAENMKRNLQDRCKDLDQDLGTLKTQLGEKQKVQ
AENNTLRVQMESLQAAVKLEQKKTQDEKNNLNQLKDAYTKLFEDYNELQEEKKKREGSVS
REDYDDLQSRFDMAEKALADKQKKIDEMKMEIFNKEKELETISVFQAQAEIYSSDFYAER
AAREKIHEEKERLATQLEYVKKQNTQLQEEMDSLGRHSMSEMQRRHVPRGANPQGPASPH
HPPGGDWQQQNIPEHACPKCGEVLPDLDSLQIHIMDCII
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggttcatccatgatgaacggggacatcaatcacccaggccgttccggccca
gggaatctgggcagtttagaagaaaccattgagcaaatgaacaccctgatcaaagagaac
agagaactgaaagaagccctgaaacaaaccaacctgtccatgaaggagagatttgagggt
ttatctgcatggaaggagaagcaaaaggaggagagagactttctggagcaacgtctggag
gaggccaaaaccagactgaacactatggatgcagagaacgaggcgttgaagaaacgagta
gaagagctggaaaaaagtggagctgagggtttacacactgaactggaggcactgaggggt
cagattacccgtcttcaggctgagaagaatgatctggtagcattaaactctgaactccag
ctcaaaacaggtcaaggttcacctagagactccttcattgagattagaatagcagaagat
gagttaaaaatgaccaatgcaccaaaggaactgtctgctttcagcatgccaaaggctgag
tcggaggaacagacggtgaggcagctgcttcgctccctcagagcagagactgatgagaag
gagagactgcagctaacgctccaggaggcacgtgagagaattgccgagttggagaaaaga
ctggaatgcgctgacagcagcgctcagacatctctcccctgtacaactgatatcaacgca
agtgctgaggtaaagaatctggaggatcagttgctgaagctatgtaatgaattgaaacag
gctcaggtcaaactggacgaggcggagaacatgaaaagaaacctgcaggacaggtgtaag
gatctggatcaggatctaggtactctgaaaactcagctcggagagaaacagaaggtccag
gctgagaacaacactctgagggttcagatggaaagccttcaggctgctgttaaactggaa
caaaagaaaactcaggatgagaagaacaacctgaaccagctgaaagatgcctataccaag
ctgtttgaagactacaatgagctccaagaggaaaaaaagaagagagagggcagcgtatca
cgggaagactatgatgacctccaaagcaggtttgatatggctgaaaaggcgctggctgac
aaacagaagaagatcgacgagatgaagatggaaatcttcaataaggaaaaggaactagaa
accatctctgttttccaggctcaggcagagatatattcctcagatttctacgcagaacga
gcagctcgggagaagattcatgaggagaaagagcgtttggccactcagctggagtatgta
aagaaacaaaacactcagcttcaggaggagatggactcgcttggcaggcattccatgagt
gagatgcaaaggagacatgtgccacgtggggccaatccacaagggccagcgtctccacat
cacccgccaggaggtgactggcagcagcagaatattccagaacatgcttgtcccaaatgt
ggagaagtcctacctgatcttgactccctgcagatccacattatggattgcatcatctag
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