KEGG   Garra rufa (doctor fish): 141333560
Entry
141333560         CDS       T11039                                 
Name
(RefSeq) optineurin
  KO
K19946  optineurin
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04137  Mitophagy - animal
grf04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:grf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    141333560
   04137 Mitophagy - animal
    141333560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:grf04131]
    141333560
Membrane trafficking [BR:grf04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    141333560
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    141333560
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    141333560
  Xenophagy
   Cargo receptors
    141333560
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 TMF_DNA_bd DUF7310 FlaC_arch PUMA_CC zf-C2H2 ATG16 EDR4-like_1st
Other DBs
NCBI-GeneID: 141333560
NCBI-ProteinID: XP_073694702
LinkDB
Position
4:9434969..9441000
AA seq 519 aa
MASGSSMMNGDINHPGRSGPGNLGSLEETIEQMNTLIKENRELKEALKQTNLSMKERFEG
LSAWKEKQKEERDFLEQRLEEAKTRLNTMDAENEALKKRVEELEKSGAEGLHTELEALRG
QITRLQAEKNDLVALNSELQLKTGQGSPRDSFIEIRIAEDELKMTNAPKELSAFSMPKAE
SEEQTVRQLLRSLRAETDEKERLQLTLQEARERIAELEKRLECADSSAQTSLPCTTDINA
SAEVKNLEDQLLKLCNELKQAQVKLDEAENMKRNLQDRCKDLDQDLGTLKTQLGEKQKVQ
AENNTLRVQMESLQAAVKLEQKKTQDEKNNLNQLKDAYTKLFEDYNELQEEKKKREGSVS
REDYDDLQSRFDMAEKALADKQKKIDEMKMEIFNKEKELETISVFQAQAEIYSSDFYAER
AAREKIHEEKERLATQLEYVKKQNTQLQEEMDSLGRHSMSEMQRRHVPRGANPQGPASPH
HPPGGDWQQQNIPEHACPKCGEVLPDLDSLQIHIMDCII
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggcatctggttcatccatgatgaacggggacatcaatcacccaggccgttccggccca
gggaatctgggcagtttagaagaaaccattgagcaaatgaacaccctgatcaaagagaac
agagaactgaaagaagccctgaaacaaaccaacctgtccatgaaggagagatttgagggt
ttatctgcatggaaggagaagcaaaaggaggagagagactttctggagcaacgtctggag
gaggccaaaaccagactgaacactatggatgcagagaacgaggcgttgaagaaacgagta
gaagagctggaaaaaagtggagctgagggtttacacactgaactggaggcactgaggggt
cagattacccgtcttcaggctgagaagaatgatctggtagcattaaactctgaactccag
ctcaaaacaggtcaaggttcacctagagactccttcattgagattagaatagcagaagat
gagttaaaaatgaccaatgcaccaaaggaactgtctgctttcagcatgccaaaggctgag
tcggaggaacagacggtgaggcagctgcttcgctccctcagagcagagactgatgagaag
gagagactgcagctaacgctccaggaggcacgtgagagaattgccgagttggagaaaaga
ctggaatgcgctgacagcagcgctcagacatctctcccctgtacaactgatatcaacgca
agtgctgaggtaaagaatctggaggatcagttgctgaagctatgtaatgaattgaaacag
gctcaggtcaaactggacgaggcggagaacatgaaaagaaacctgcaggacaggtgtaag
gatctggatcaggatctaggtactctgaaaactcagctcggagagaaacagaaggtccag
gctgagaacaacactctgagggttcagatggaaagccttcaggctgctgttaaactggaa
caaaagaaaactcaggatgagaagaacaacctgaaccagctgaaagatgcctataccaag
ctgtttgaagactacaatgagctccaagaggaaaaaaagaagagagagggcagcgtatca
cgggaagactatgatgacctccaaagcaggtttgatatggctgaaaaggcgctggctgac
aaacagaagaagatcgacgagatgaagatggaaatcttcaataaggaaaaggaactagaa
accatctctgttttccaggctcaggcagagatatattcctcagatttctacgcagaacga
gcagctcgggagaagattcatgaggagaaagagcgtttggccactcagctggagtatgta
aagaaacaaaacactcagcttcaggaggagatggactcgcttggcaggcattccatgagt
gagatgcaaaggagacatgtgccacgtggggccaatccacaagggccagcgtctccacat
cacccgccaggaggtgactggcagcagcagaatattccagaacatgcttgtcccaaatgt
ggagaagtcctacctgatcttgactccctgcagatccacattatggattgcatcatctag

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