Garra rufa (doctor fish): 141333579
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Entry
141333579 CDS
T11039
Symbol
tmtc1
Name
(RefSeq) protein O-mannosyl-transferase TMTC1
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
grf01003
]
141333579 (tmtc1)
Glycosyltransferases [BR:
grf01003
]
O-Glycan biosynthesis
O-linked Man type
141333579 (tmtc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_11
TPR_17
TPR_8
TPR_14
TPR_19
TPR_16
TPR_12
TMTC_DUF1736
TPR_10
TPR_7
TPR_15
TPR_CcmH_CycH
TPR_Slam
TPR_4
TPR_9
TPR-S
TPR_6
ANAPC3
HAT_PRP39_C
ARM_TT21_5th
TPR_MalT
FAT
DUF7017
TPR_3
HAT_PRP39_N
TPR_5
ARM_TT21
ARM_TT21_2nd
TPR_20
ARM_TT21_C
Suf
ARM_TT21_4th
NatA_aux_su
Mad3_BUB1_I
BTAD
Fis1_TPR_C
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
141333579
NCBI-ProteinID:
XP_073694727
LinkDB
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Position
4:10570048..10627874
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AA seq
873 aa
AA seq
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MTANSRGTKAAPPPVQRRRLSALPRPGAGVRLLRYAALVAVCALCYSNSLWGEFVHDDIW
AITNNPDVRPGSSLRSIFTNDFWGKRMADNTSHKSYRPLCILTFKLNILLGGMTPFYFHL
VNVFLHCVVTALLMHICEQCVFEDSNFSFLTALLFSVHPIHTEAVSGIVGRADVLASVLF
LLAFLSYIRSVSANRMADEFPPTVSVLSLALSLLLGTCAMLVKETGITVFGVCVLYDFLV
LCRKPLISHLSHSGLKELGRISSPFIKRACVVSLHVTVIMSIRLWLMGGSMPLFSEQDNP
ASFSPYLLTRFLTYCYLLAFNAWLLLAPIVLCYDWQVGSIPLVESLWDSRNIASLTLALV
MLALSLNCVTCLQKMKGKEVLVGVLFLVFPFIPASNLFFRVGFVVAERVLYMPSMGYCVL
VVHGLNRLYSVVSRWGAVALTVSMLVVLLLFSWKTVQQNEIWLSREALFRSGIQTLPHNA
KVHYNYANFLKDRGRNQEAIYHYKTALRLYPRHASALNNLGTLTHQAEEAEVYYRRALDI
NPQHNRALFNLGNLLKSQGKEEEAERMLKESIHFGPHFADAYSSLASLYADQGHSKEANE
IYTNGIENCPDSSDLHNNYGVFLVDTGHGDRAAFHYQEAVRLKPSHYVAMVNLGRLLRSS
NDNEEAELWYKRALKVVRKVDILTPLGALYYNTGRYEEALEVYREAATLQPDSTDIWLAL
AQVLAMAGRSAEAEKMTLGIISKTSNCIECYRLLSAIYSKQGNHTEALDALRTALQQEPS
DPAVRAELHFSMGNQLREMNELDRAFQSYKLAVELKPDQSQAWMNMGGIQHIKGDYAAAR
MYYQRALLLSPGSKLLKENLAKLDRLEKKLQGA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgaacagccgagggaccaaagccgctcctccccccgtgcagcggcggcggctg
tccgcgctaccgaggccgggagcgggagtccggctgctccggtacgccgcgctggtggcg
gtgtgcgcgctctgctacagtaactctctctggggggagtttgtgcatgatgatatatgg
gccatcactaacaatccagatgtcagaccgggctccagcctccggagcatcttcaccaat
gacttttggggcaaacggatggctgacaacaccagccacaaatcctaccgtccgctctgc
atcctcactttcaagttaaacattttgctgggcggcatgactccattctacttccacctg
gtgaacgtgtttctgcactgcgtggtgacagcgctgctcatgcacatctgcgaacagtgt
gtgtttgaagacagcaacttctctttcctcaccgcactgcttttctctgttcaccccatt
cacactgaagctgtgtctgggatcgttgggagagcagatgtgttagccagcgtgttgttc
ctcctggcttttctctcctatattaggagtgtgtcagcgaacagaatggctgatgagttt
ccccccacggtgtctgtcttgtcgctggctctcagtctgttgttgggcacctgtgccatg
ctggtgaaagagacaggcattacggtgtttggtgtgtgcgtcctatacgatttcctggtg
ctctgccgcaaaccactaatctcgcacctgtcgcactccgggttgaaggagctcggcaga
atttccagcccgttcatcaaacgtgcttgcgtcgtttcgctacacgttacagtcatcatg
tctatccgcttatggttaatgggtggatccatgccgctgttctcagagcaagacaatcca
gcatccttctctccatatctgctcaccaggtttcttacatactgctacctgctcgccttc
aatgcctggcttctactggctcccatagtgctttgctacgactggcaggtgggcagcatt
cctttagtggagtctctgtgggacagccgaaacattgcttcactgactttggctctcgtc
atgctggcgctgagcctgaactgtgttacatgcctacagaagatgaaagggaaggaggtg
ttggtgggcgtcctgttcctggtctttcccttcatcccagccagtaatctgttcttccgt
gtgggatttgtggtggcagaaagagttctctacatgcccagtatgggttactgtgttctg
gtggtgcatgggctgaacagactgtattcagttgtcagtcggtggggagcggtcgcacta
actgtgtccatgctggttgtcctcctcctcttctcctggaagaccgtccaacagaatgag
atctggctctctagagaagccctgttcaggtctggcattcagactttacctcacaatgct
aaagttcattacaactatgccaacttcctgaaagacagaggacgaaaccaagaagccatt
taccattataaaacagccctcagactttaccctcgacatgccagtgctctgaataatctg
ggcaccctgactcaccaggcagaggaggctgaagtttattacaggagagcgctggatatt
aaccctcaacacaacagagctctgttcaacctgggcaaccttctcaagtctcaggggaag
gaggaagaagcagagaggatgttaaaggaatcgattcatttcggcccccattttgctgat
gcgtactccagcctggcctcactatacgctgaccagggacattcaaaagaagcaaatgaa
atttataccaacggtattgaaaactgccccgacagttctgacctccataacaactatggc
gtgttcctagtggacacaggtcacggggatcgtgcagcctttcattaccaggaagcggtg
cgtctcaagccatctcactatgttgccatggtgaacctgggtcgtctccttcgctcgtcc
aatgacaatgaagaggcggagctgtggtacaaaagggccctgaaagtggttcgtaaagta
gatatcctgacccctctgggggctttatattacaacacgggtagatatgaggaggcactg
gaggtttacagagaggctgctacacttcagcccgacagcactgatatctggcttgccctg
gcgcaggttctagccatggcaggccgctctgcggaggcagagaaaatgaccctgggcatc
atttcaaagaccagcaactgcattgaatgttaccgcttgttgtctgccatctacagcaaa
caaggcaaccacactgaggcgctggatgcattgaggacagcattgcagcaggagccgtca
gaccctgcggtgagggcagagctgcacttctcaatgggcaaccagctcagagagatgaac
gagcttgatcgagccttccagagctacaagcttgctgtggagctcaaacctgaccaatca
caagcctggatgaatatgggcggcattcagcatatcaagggagactatgcagcagcacga
atgtactaccaaagagctcttctcctttcacccggctccaaactgctgaaggaaaacctg
gccaagctggacagactagagaaaaaacttcaaggggcctag
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