Garra rufa (doctor fish): 141333633
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Entry
141333633 CDS
T11039
Symbol
rab11fip1a
Name
(RefSeq) uncharacterized protein rab11fip1a
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
grf Garra rufa (doctor fish)
Pathway
grf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141333633 (rab11fip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141333633 (rab11fip1a)
Membrane trafficking [BR:
grf04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
141333633 (rab11fip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
141333633
NCBI-ProteinID:
XP_073694794
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All DBs
Position
1:28787037..28823586
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AA seq
1187 aa
AA seq
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MSLGDQQWYPTSVQVTVLKARSLRIKGKNGTNDAYAIMQVGKDKFSTSVAEKCVSPEWKE
EATFDLPLIHQGDAERCTLYIIAMHRALVGLDKFLGQAVINLLDLHANRSRKKTDWYKLV
DKNGKQEKDRGEVLLDIQFMRNNLTASMFDLSMTEKPRSGIGKIKDKIRGKKKDSMSDSV
SAIVPSSVGTDSEGEGEGGSDKKKKSKLKSLFGPKTNLQRNVSQSMSTLGTLPEKNSSLS
SSRSSGLNVDSPDVKKKFRLLGHKRTDSSDSKVSLGPFSLLSRSKQNIQEQNNLCINGSH
VYAEDQEPKANFGSTLSLNSSGKGSVEDVRKYHQRNTSDLSIDSLKGLSIPSYKPEVQDK
ASLVPQRPLEDRSHVDVEERGRKSEGKSLQEMLDRQEEQEQRKQQEREKKLEEERRSRLE
EQERKRKEEEEMQRKRREEETQRAEEQRHQEESRVTERLSSLFGIGKKKEEKKEEAMNEP
KRLNVPSSSNPFEDIPLTADNPSSIPEERSTDSQKGVRTTLAPTPPTSAFPSRTAKVSAV
KPRLALSVLSETDNSHSQSPSDFVDTQSTIHAPPLSPSLSTDQLESFGMFSNLHSSLAPA
KPQRTFSELSESSMEDLSAPKKRMAPLPPGYPRGSYKTESHPDNGEQAHTQNSKDRPALP
LPDYESLYPKKRHGVMGQTHWDHLVAEVNQRNWDFSEEINVDGPERPKPGLKDRTSVNLN
QHQKKQEAPAPVRHKEAIIPPKGRAPATPEPSVETNVQHGNIRESLYATVNKPKNSAPKN
LENNPPPAVHSRRAPQETERKTDAITQKEKPTPAARSIQNVQSKSDDVAKEMPSVKPRQQ
SLVKDAVRQVQPDKQVTNQPMTSENNKAEKQHKGQKGSVSADGLVEVDFLRTAESPEELH
LGKLDPFPSDNLISNDPWALPQQNEDVLFTRGSKQMGNLEDRTSTVDKKDKKSTNKDTND
PFANLSENSKSPKSERGKQSPSFTEQARATFQRNFSLRKKNSSRQYPTSKSDTENTSLAR
SVSQSSQDADDVELTVTSVAPPSKTDPTLVTSESLMGGKTTIRAWVSPSEAQPVALQNGG
GSAVSNSRRPHPVKPMSTESQSSSVIAVGKDLKTLTIKEMAEKSKNVDSGPYTQLTQEEL
ITLVVKQQTELSKKDARITELEDYIDNLLVRVMEEKPAILLSLQSKC
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgggtgaccagcagtggtatcccactagcgttcaggtaacggtgctcaaagcg
cgaagcctgcggatcaagggcaaaaatggcacgaacgacgcctatgccatcatgcaggtg
ggcaaggacaagttttccacctcggtagcggagaaatgcgtctcgcccgaatggaaggaa
gaagcgacgttcgacctgccgctgatccatcagggggacgcggagcggtgcacgctgtac
atcatcgccatgcaccgagccctggtggggctggataagtttttgggacaggctgtcatc
aacttactggacctccacgccaacagatcacgcaaaaagaccgactggtacaagctggtg
gataagaatggcaaacaggagaaggaccgaggggaagttcttttggacattcagttcatg
cggaataacctgacagccagcatgtttgacctctccatgacagagaagcctcgctccggc
atcggcaagatcaaggataaaattcgtggtaagaagaaagatagcatgtcagattctgtc
tctgcgatcgtgccgtcttcagtgggaacagacagtgaaggagaaggagagggcggttca
gacaagaagaagaaatctaaactcaagtccttgtttgggccaaagacaaacctgcaaagg
aatgtttcccagtccatgtcaaccctgggcaccctgcctgagaagaacagttcactcagc
agcagcagatcatctggccttaatgtggactctcctgatgtgaaaaagaagtttagactt
ctgggacacaagcgcactgacagctcagatagcaaagtgtctcttggccccttttctctt
ctgagccgctctaaacaaaacatccaggagcagaacaacctctgtatcaacggcagccac
gtttatgcagaggatcaagaacctaaagcgaattttggctccacgctcagtctgaacagc
tcaggaaagggttcagtagaggatgttcgtaagtaccaccaaagaaacacttcggacctc
tctatcgattcacttaaaggcctgagtatcccttcatacaagcctgaagtgcaagacaaa
gcttctcttgtcccacagcgccctctagaagacaggagtcatgtagatgtggaggagaga
ggtaggaaatctgaaggaaaaagcctgcaagagatgctggaccgacaggaagagcaagag
cagaggaagcagcaagaacgagagaaaaaactagaggaagagaggagaagcagacttgaa
gagcaggagaggaagcgcaaggaagaggaagagatgcagaggaagcggcgcgaggaggag
acacagcgagccgaggagcagcgacaccaggaggagagcagagtaaccgaacggctctcc
tctctctttgggattggaaagaaaaaggaggagaagaaggaggaagctatgaatgaaccc
aaacgtctgaatgtgccgtcctcctcaaacccgtttgaagacattcccctcactgcggat
aatccatcctctatcccagaagagagatccaccgactcacagaagggcgtcaggaccact
ctggccccgacgccacccaccagtgctttccctagtcgcacagccaaagtgtctgcggtc
aagcccagattggctctgagtgtactgtctgaaactgataatagccattcccaatccccc
tcagactttgtagacacccagagcactatccacgctcctccactttccccatccctctct
actgatcaattagagtcttttggtatgttttccaatcttcattcttctttggcacctgct
aaacctcagagaactttcagtgagttaagtgaatccagcatggaagacctctcagctccc
aagaagcgaatggctcctctacctcccggatatcccaggggctcgtataagaccgaaagc
catcctgataatggggaacaagcccatacccaaaactccaaagataggcctgctcttcct
ctcccagattacgaaagcctctatcctaagaagagacatggggtgatgggtcagacacat
tgggaccatcttgttgcagaggtaaaccagagaaactgggatttctcagaagaaattaat
gtagatggacctgagaggccgaagccgggattaaaggacagaacttcggtgaaccttaac
cagcaccaaaaaaaacaagaggcacctgcccctgtgaggcacaaagaagcaatcattcca
cccaaaggtcgtgctcctgcgacaccagaaccatcggttgagaccaatgtccaacatggg
aatatcagagagtctttatatgccactgtcaacaagcctaaaaactctgctcccaagaac
ttggaaaacaatccacctcccgctgtccatagtcgacgtgcacctcaggagacggaaagg
aagactgatgccattacgcaaaaagagaagcctacgccagctgcaagatccatacaaaat
gtacagtcaaagtctgatgatgtggctaaagagatgccttcagtcaaacccagacaacag
tctttagtcaaggatgcagtcagacaagtccaaccagacaagcaagtaaccaatcaaccc
atgacatcagaaaacaacaaagccgagaaacaacacaagggccagaagggaagtgtttct
gcagatgggttagttgaagtagacttcctcagaactgctgaaagtccagaagaactgcat
ttgggaaaacttgacccattcccaagtgataacctaatatctaatgatccctgggcttta
ccacagcagaatgaagatgtactgtttactaggggctcaaaacaaatgggaaatcttgaa
gatcggacatcaaccgttgataagaaagacaagaagtccacaaacaaagatacaaatgat
ccattcgcaaatctttcagagaatagcaagtcaccgaaatcagagcgtggaaaacaatcg
cccagcttcactgaacaagccagagccacatttcaaagaaatttttcacttagaaagaaa
aattcatctcgccaatacccaacttcaaaatctgatacagagaatacaagcttggctaga
tcagtttctcagtcttcacaagatgctgacgatgtcgagctgactgtaaccagtgttgct
ccaccaagtaaaactgatcccacactggtaacatctgaatcccttatgggggggaagact
actattcgtgcttgggtctcaccatcagaggcccaaccagttgcactgcagaatggtggt
ggaagtgcagtttctaattcaagaaggcctcacccagtgaaacccatgagcaccgagagc
cagtcttccagtgttatcgctgtggggaaagacctgaagactctcaccatcaaggaaatg
gctgagaagtcaaagaatgtagatagcggtccatacacccagctcacacaggaggaactg
atcacactggtggtaaagcaacagaccgaactctccaagaaagacgccaggatcacagaa
ctggaggactacattgataacctgctagttcgcgtcatggaggagaaaccggccatcctg
ctttcacttcaatccaagtgttag
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