Garra rufa (doctor fish): 141333656
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Entry
141333656 CDS
T11039
Symbol
tnpo3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
grf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141333656 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
141333656 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
grf03016
]
141333656 (tnpo3)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
141333656 (tnpo3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
KAP122_middle
Motif
Other DBs
NCBI-GeneID:
141333656
NCBI-ProteinID:
XP_073694829
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All DBs
Position
4:15424538..15443735
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AA seq
923 aa
AA seq
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MEGGKPSLPLVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQLKQDVESC
YFAAQTMKVKIQTSFYELPPETHTSLRDSLLSHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYSNDVSSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSTTV
VTLLVTCAEKSGHDEKMLIKVFRCLGSWFNLGVLDNNFMASNQLLMILFQVLQRDETSTN
LHEAASDCVCSALYAIENVAIHLPLAMQLFQGVLSLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLEMTVRTPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKMNDPA
LHRVFKPYIQRLLHSLARHCQLDPDHEGVPEDTDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKEGNPPWEVTEAVLFIMASIAKSIDPENNPTLTEVLEQIVLLPETVHLAVRYT
SIELVGEMSEVIDRNPCMLDPVLNFLMKGLREKPLASVAAKAIHNICSVCRDHMAQHFQG
LLDIARSLDSFALSTDAAVGLLKGTALVLARLPLEKIAECLNDLCAVQVMALRKLLAQDS
STGKSSDPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVMSETLNAHQNDNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFVQRSPVTLLNSSIIVHIIQCA
IAATTLDHRDANCSVMKFIRDLIHTGVTNDHEDDFEMRKRLIGQVMEQHGLQLVTQLINT
CCFCLPPYTLPDVAEVLWEIMVFDRPTFCRWLETALKGLPKETAGGAVTVTHKQLTDFHK
QVTSAEECKQVCWAIREFTRLYR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgggaaaccatccctgccgctggtttaccaggccgtgcaggcgctgtatcac
gacccggaccctgccggcaaggagcgcgcctcggtctggctgggagagctgcagagatcg
atgtacgcgtgggagatttcagatcagctcctgcagctgaagcaggacgtagaatcgtgt
tatttcgcagcccagacaatgaaggtgaagatccagacgtcgttctacgagcttccccca
gaaacccacacctcactgagagattcgctcctgtctcacatccagaacctcaaagacctg
tctcccatcatcgtcacacagcttgcattggcaatcgcagatctggctcttcagatggcc
tcgtggaaaggctgtgttcacaccctcatagaaaaatacagtaacgatgtgtcctccatg
cctttcctgattgagatactgaccgtactgccagaggaggtgcatagccgctctttaagg
attggagctaatcgacggacggagatcatcgaggatctggcctactactcgaccacagtg
gtcactcttctggtgacgtgtgcggagaagtccggacatgacgagaagatgctaatcaag
gtgttccggtgtttggggagctggtttaatttaggagtgctggacaacaacttcatggcc
agcaatcaactgctgatgattctcttccaagtgctgcagagggatgagacgtctacaaac
ctgcatgaggcggcatcagactgtgtgtgctcagcactgtatgcgatagagaacgtagcc
atacacttgcctctggccatgcagctcttccagggagtcctttctttagaaacagcctac
cacatggctgtagcacgagaggaccttgataaggtgctaaattattgccggatctttacg
gaattgtgtgagacatttttggagatgaccgtaaggactcctgggcagggcatgggagat
ctacgcaccttagagttactgcttatttgtgctggacatccccagtatgaggtggttgag
atctcgttcaacttctggtaccgtctgggagaacatctttataaaatgaacgatccagcc
ctccacagagtgtttaagccgtacatacagagactactgcacagtcttgcccgccactgc
cagctcgacccagatcacgaaggagtcccggaggacacagatgatttcggcgagttcagg
atgagagtgtctgatcttgtgaaagatgtcattttcctagtaggctccatggagtgtttt
tcacagctgtattcgactctgaaggagggaaaccccccatgggaagtaactgaggctgtt
ttgttcatcatggcttccattgctaagagtatcgatcctgagaataatcccacgctaacg
gaggtgctagaacagatagtgttgcttcccgagacggtccaccttgctgttcgctacacc
agcattgagctggttggtgagatgagtgaagtaatcgaccggaacccttgcatgttagat
cctgtattaaacttcctgatgaagggtttgcgagagaagccgttggcctctgtggcagct
aaagccattcacaacatctgctcggtgtgtcgagatcacatggcgcagcacttccagggc
ctgctggacatcgcccgctctctcgactcattcgccctgtcaacagatgctgcggttggc
ttgctgaaaggcacagcgttggtgttggcccgcctgcccctggagaagatcgcggagtgt
ctgaacgatctgtgtgcggttcaagtcatggcactgagaaagttgctggctcaggactcc
agtactgggaagtcatcagatcccactgtgtggctggacagacttgctgttatcttcaga
cacacaaaccctatagtggagaatggacagacgcatccctgccagaaagttattcaagag
atctggcccgtgatgtcggaaacgttaaatgcccaccagaatgataaccggatagtagag
cgctgctgccgctgcctgagatttgcagtgcgttgcgtaggcaaaggctctgcttcccta
ttacagccacttgtaactcagatggtgagtgtgtaccaagtgtaccctcactcctgtttc
ctgtacctgggcagcattctggtggacgagtatggcatggaggaaggatgcagacaaggc
ctgttagacatgctacaggctctctgtatgccgaccttccagctgttagagcagcctaac
ggactgcgtaatcaccccgacacagtggacgatctttttagacttgccacaaggtttgtc
cagcgcagtccggtcacattgctgaacagcagtattatcgtccacatcatccagtgtgcc
atcgctgccaccaccctggatcatcgagatgccaactgcagcgtcatgaagttcatcaga
gaccttattcacactggggtcaccaatgatcatgaggatgactttgagatgcgaaagcgt
ctgattggtcaggtgatggagcagcatgggctgcagctagtgactcagctaatcaacacc
tgctgtttctgcctgccgccttacactctgccagacgtggccgaggtactctgggagatc
atggtctttgatcggccgacgttttgccgttggctggaaaccgcactgaagggtcttccg
aaagaaacagcaggaggcgctgtaaccgtcacacacaagcagctcaccgacttccataag
caggtcacgagtgccgaggaatgtaaacaggtttgttgggcgatacgagagtttaccagg
ctgtaccgatag
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