Garra rufa (doctor fish): 141333705
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Entry
141333705 CDS
T11039
Symbol
mybpc1
Name
(RefSeq) myosin-binding protein C, slow-type isoform X1
KO
K12557
myosin-binding protein C, slow-type
Organism
grf Garra rufa (doctor fish)
Pathway
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141333705 (mybpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141333705 (mybpc1)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
141333705 (mybpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
THB
Ig_DSCAM-DSCAML_C
V-set
Ig_CYK3_C
Motif
Other DBs
NCBI-GeneID:
141333705
NCBI-ProteinID:
XP_073694898
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Position
4:complement(19371538..19424457)
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AA seq
1336 aa
AA seq
DB search
MPEPTKKDDGQPEENVAPDSGDGPSENSVVITPKEAKVATKDTEAIVTVTEPEAAVPIPA
AGAPQPQPVVIVVTEIEPVEGEVTDPQPIVTEPVENGHNEPAPTKAQKRVEVTEVKEEEP
RTSKVPVSSMKKSAESIATPVKEDGSTPKKLSIDLPNDSDPESTRGRKDSVWSMEDGQPP
EEIDKQVDSPPLSTLLIEQPQSGSINVGGDISFVAKVEAKDLLRKPTIKWFKGKWMDLAS
KTGKHLQLKESFDRFTKIHTFEMHIIKAKENYAGNYRCEVNYKDKFDSCSFDLEVKEVAE
GSQSIDIRSAFKRSSEGQEDAGELDFSGLLKHREHKQEEVPEVDVWEILKNARPDEYEKI
AFTYGITDLRGLLKRLKKTKKEEKKSEAFAKRLEPAYQADKGGKIRLVVDLADPTVELKW
YKNGQEIRPTPKYIFEHKGTQRIMVINNCQMNDDAAYSVTAGDEKCTTELFVKELPVNIV
KQLEPVKTTVNERIELECEVSEEGAKVKWMKNGVEVPTGVRSRYRVKSEGTKHWLIIDDA
TKDDTGTYSLMATGGTTEAHVQVDLKPLKILMDLQSVTVLLGQPLKLNCEIYPGNVPGRW
YKNGQLIQSSERINILHRAKNHNLDIESSTIHDAGDYTFVPEGYSQTLSAKVHIIDPPRV
HLEALNVQDNTVTIVAGNKLRLEIPISGEPAPRVVWMKGERVILDSGNRVRAETFADQTC
LTIDIAEREDTGNYKIVLQNEAGEDTASVKIKVVDIPDPPEAPLVPDVGGDWCTMTWEPP
RYDGGSPILGYFIERKKKQSSRWMRLNFDLCKETTFEPKKMIEGVPYEVRIFAVNAIGVS
KPSEPSKPFIPLAVTSEPTMLVVDDVTDTTVTMKWRPPDTIGAAGLDGYQVEYCLEGTDE
WILANKELTEKTRYTITGLPMEGKIFVRVKAINAAGASAPRTTQHSILVKEVIEPPKIRI
PRHLKQTYIRKVGEVVNLVVPFVGKPRPKVNWLKEGQPIDQTISIRNSDCDSIMFIRKAE
RKHSGKYELSVQVENHIDTAMLDIQIVDLPGPPQAVKIEEVWGTNVALDWNPPKDNGNAP
IIGYTIQKADKKTMEWYTCIEHYHRTCITITDLVVGNEYFFRIYSENMVGLSESATATKD
SALIVKEGIFPHDTALGLYHAKSHSPFPSHTSSSSSSSSRSSSHSHSQSGLLLKIPEYND
RDFTEAPTFTQPLINTFAVAGYNATLNCSVRANPRPKVVWMKNKITIIDDPRYRMFSNQG
VCTLEIRKPSPFDGGVYTCKAVNDLGEAQVDCKLEVKGGFTFFELMKRGVPLHLIDKYMN
ESKTSEKPESEKKESN
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcccacaaagaaagatgatggccaaccggaagagaatgttgccccagactct
ggtgacggcccatctgagaattcggttgtgattaccccgaaagaggctaaagtggccacc
aaagacacagaggccatagtgactgtcacagaaccagaggcagccgtgcccatacctgct
gctggggcccctcagccacagcctgtagtaattgtggtgactgaaatagagccagtagag
ggtgaggtcacagacccacagccaatagtgacagagcctgtagagaacgggcacaatgaa
ccagcgccaacaaaggctcagaagcgtgtcgaggtgactgaggtaaaagaagaggaaccc
agaacctcaaaagttcctgtatcttcaatgaagaagtctgctgagtcaatagctacccct
gtaaaagaggatggcagcactcccaagaaactttctattgaccttcctaatgatagcgac
cctgagtcaaccagggggagaaaagactcagtctggtctatggaggatggacagcctcct
gaggagattgacaaacaggttgacagtccaccgctctcaactcttttaattgaacagcct
cagagtggttccatcaatgtaggtggagacatctccttcgttgcaaaggtggaggccaaa
gacttgcttcgtaaaccaaccattaagtggttcaagggcaaatggatggatctggctagc
aagactgggaagcatctacaacttaaagaatcttttgatcgctttaccaagattcacacc
tttgagatgcacattataaaggcgaaggagaactatgcagggaattacagatgtgaggtc
aactacaaagacaaatttgatagctgctcttttgacctggaggtcaaagaagtcgcagag
ggttctcaaagcattgatatccgctcagctttcaaaagaagcagcgaaggccaagaagat
gcaggcgagcttgactttagtgggcttctcaaacatagggagcacaagcaagaggaagtt
cctgaggtggatgtgtgggagattttgaaaaacgcccgacctgatgaatacgagaagatt
gcttttacgtatgggatcaccgatctcagaggcctgctgaaaagactgaagaaaaccaaa
aaggaagagaaaaagagtgaagcatttgccaagagactggaacctgcatatcaggcagac
aaaggtggaaagatccggttagtcgtggaccttgctgacccgactgtggagttaaaatgg
tacaagaacggacaagagattcgccctactccaaagtatatctttgagcacaaaggcact
cagcggataatggttattaacaactgccagatgaatgatgatgctgcctactcagtcacc
gcaggagatgaaaagtgcaccactgaactgtttgtaaaagaactgcctgtgaacatagta
aaacagctggagccagtgaaaaccacagtgaatgagagaatcgaactggagtgtgaagtg
tctgaggaaggagccaaagtaaaatggatgaagaatggggtggaggtccccacaggggtg
cgctcacgatatcgggtgaaatctgaggggaccaaacactggctgatcattgacgacgcc
acaaaggacgacactggcacctactccctcatggccactgggggcaccactgaagctcac
gttcaagtcgatctgaagcctctgaagattttaatggatctacaaagtgtaacagtgttg
ttgggtcaacctcttaaactgaactgtgagatttacccaggaaacgtcccgggccgctgg
tacaagaacggccagctgattcagtctagcgaacgcatcaacattctgcatagagccaag
aatcacaaccttgacattgagagctccactattcatgatgcaggcgattatacctttgtt
cctgagggatactcgcagacgctgtctgccaaagtgcacatcatagatccacccagggtg
catttagaagcactgaatgtccaggacaacactgtgaccattgtggctggaaacaaactc
cgcctggagattcctattagtggagaaccagcacccagagtcgtgtggatgaagggagaa
cgggtcatccttgattcaggaaatcgggtgcgtgctgagacgtttgcagaccaaacctgc
ctcactattgatattgcagaaagagaagataccggaaactacaagatcgtccttcagaac
gaagctggagaagacacagctagtgtcaaaatcaaagttgtagatatcccagatccccct
gaggctcctctggttcctgatgtgggtggagattggtgcactatgacatgggagccgcca
cgctatgatggtggttcccccatccttggatatttcattgagcgaaagaagaaacagagc
tcccgatggatgaggctgaacttcgacctttgcaaggagaccaccttcgagccaaaaaag
atgattgagggtgtgccatacgaggtgcgaatctttgcagttaacgctatcggcgtctcc
aaacccagtgaaccctccaaacctttcattcccctggctgtgaccagtgaacccacaatg
ctggtggtggatgacgtcacagataccacagtgaccatgaagtggagaccaccagacacc
attggtgccgctggactcgatggctaccaagttgaatactgccttgaaggaactgacgaa
tggatacttgctaataaagagctgaccgaaaaaacaaggtacactataaccggtctgcca
atggagggcaagatatttgtgcgtgtcaaagccataaatgctgctggggccagtgcacca
cgtacaacccaacactccatactggtcaaagaggttatcgagcctcctaagattcgcata
cctcgacacttgaagcagacgtacattcgaaaggtcggtgaagtcgtcaacctcgtcgtg
ccatttgtgggtaaaccaaggccaaaagtcaactggttgaaagagggtcagccgattgac
caaaccatcagcattcgcaactcagattgtgacagcattatgttcatccgcaaggctgag
cgcaagcactctgggaaatatgaactgagtgtgcaagtggagaatcatatcgacacggcc
atgctggacatccagatagttgatctaccaggcccaccacaggctgtaaagattgaagag
gtttggggaactaatgtagcattggactggaacccacccaaggacaacggcaatgcacct
ataattggctacaccatccagaaagctgacaaaaagacaatggaatggtacacatgtata
gagcactaccatcgtacctgcatcacaatcacagatctggtggtgggtaacgagtatttc
ttcaggatctactcagagaacatggtgggcttaagtgaaagtgccactgccactaaagac
agtgctctgatcgtgaaagaagggatattcccccatgatacagctctcggcttgtatcat
gcaaagtcccactctcccttcccctctcacacgtcgtcctcctcctcctcttcctctcgc
tcttcctctcactctcactctcaatcaggcttgctactgaaaatcccagagtataatgac
cgcgacttcaccgaggcgccaacattcactcagccgcttatcaacaccttcgccgtcgct
gggtacaacgccaccctgaactgcagcgtgcgtgccaatcctcggcctaaggtagtctgg
atgaaaaacaagattaccatcattgacgacccacgttaccgcatgttcagcaaccagggt
gtgtgtacgcttgagatccgcaagcccagcccgtttgatggaggggtttacacctgcaag
gctgtcaatgaccttggagaggctcaggtggactgcaaactagaggtcaaaggaggtttt
acgttctttgagctgatgaagcgaggcgttcccttacacctcattgataagtacatgaac
gagtctaagacctctgagaagccagagtcagagaagaaggaatccaactga
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