Garra rufa (doctor fish): 141333715
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Entry
141333715 CDS
T11039
Symbol
pparaa
Name
(RefSeq) peroxisome proliferator-activated receptor alpha a isoform X1
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
grf Garra rufa (doctor fish)
Pathway
grf03320
PPAR signaling pathway
grf04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
141333715 (pparaa)
03320 PPAR signaling pathway
141333715 (pparaa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141333715 (pparaa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
grf03310
]
141333715 (pparaa)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
141333715 (pparaa)
Nuclear receptors [BR:
grf03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
141333715 (pparaa)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
141333715
NCBI-ProteinID:
XP_073694925
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Position
4:complement(20195136..20265190)
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AA seq
480 aa
AA seq
DB search
MIQSLPWSSAMVDMPSLYSPLSPLGDPILDSPLCGELIGDMEVLEDISQSLSDDAFNSFH
VLDYQSSNSAADSSTVLDVLTPASSPSSEVFASGTIQDENSSGSLALECRVCADRASGFH
YGVHACEGCKGFFRRTIRLKLEYDKCERNCKIQKKNRNKCQYCRFRKCLAVGMSHNAIRF
GRIPQSEKQRLKAEQDVSGKEEHKSQQPDTKSLARQMHEAYLKHFHMNKAKARVFLTGKT
STPPFVIHDMDTLQHAEGTLLTQLLGNVASGDVCTLREREAEARIFLFCQYASVATVTEL
TEFAKAVPGFAALDLNDQVTLLKYGVYEALFALLASCMNKDGLLVARGGGFITREFLKSL
RKPFSDMMEPKFQFAMRFNALELDDSDLALFVAAIICCGDRPGLSDVSQIERIQESIVHA
LRLHLSSNHPDNALLFPKLLQKLADLRQLVTEHAELVQEINKTEDSSLHPLLQEIYRDMY
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaagcttgccgtggtccagcgccatggtagacatgccgagcctgtacagtccc
ttgtcccccttgggcgatccaattctggacagccccctgtgtggagagctcattggtgac
atggaggtgctggaggacatctcacagtcactcagcgacgatgccttcaactcctttcac
gtactggactaccagagcagcaactcagcagcagacagctcgactgtcctagatgtctta
acaccggcgtctagtccgtcttcagaagtgtttgcgtccggcacgattcaggacgagaac
tcctctggttctctggccctcgagtgccgagtctgcgccgaccgggcctcaggtttccac
tacggagtgcacgcctgcgaaggttgcaaggggttcttcaggagaaccattcgactcaaa
ctggagtacgacaagtgcgaacgcaactgcaagatccagaaaaagaaccgcaacaaatgt
caatattgccgtttccgcaagtgcctcgcagtgggcatgtcccacaacgctatccgtttt
gggcggataccccaatccgagaagcagaggctgaaagcagagcaggacgtcagcgggaaa
gaggagcacaagtcccagcagccggacacgaagagtctagccaggcagatgcatgaagcc
tacctcaaacacttccacatgaacaaagccaaagcacgtgtgtttctcacgggcaagacc
agcactccgcccttcgtcatccacgacatggacactctccagcacgcagagggaacactg
ctcacccagttactgggcaacgtggcgtccggagacgtctgcactctgcgggagagagaa
gcggaagcccggatctttctgttctgtcagtacgcctcagtggcgacggtcacggagctg
acggagttcgccaaggccgtgcccggcttcgccgccctggacctcaacgaccaggtgact
ctgctgaagtacggcgtgtacgaggcgctcttcgccctgctggcctcctgcatgaacaaa
gacgggctgctggtggctcgcggcggaggcttcatcactcgcgaatttctgaagagcctg
cgcaagcccttcagcgacatgatggagcccaaatttcagttcgccatgaggttcaacgcc
ctggagctggacgacagcgacctggcgctgttcgtggccgccatcatctgctgtggagac
cgtccaggactgagcgacgtgtctcagatcgagcgcatccaggagagcatcgtccacgcc
ttgcggctccacctgtcgtccaaccaccccgacaacgctttactctttcccaagctgctg
cagaaactggccgacctgcggcagctggtgacggagcacgccgagctggttcaggagatc
aacaagacggaagactcttcactccacccgcttctgcaggagatctacagagacatgtac
tga
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