Garra rufa (doctor fish): 141333730
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Entry
141333730 CDS
T11039
Symbol
snd1
Name
(RefSeq) staphylococcal nuclease domain-containing protein 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
grf Garra rufa (doctor fish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Lig_C
Motif
Other DBs
NCBI-GeneID:
141333730
NCBI-ProteinID:
XP_073694945
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Position
4:complement(20881876..21116654)
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AA seq
914 aa
AA seq
DB search
MASAIPTQVQSNQASASQLQRGIVKMVLSGCAVIVRGQPRGGPPPERQINLSNIRAGALA
RRAVQGQPDTKDTPDEPWAFQAREFMRKKVIGKEVCFTVENKTPQGREYGMVYLGKDTSG
ENIAESLVAEGLATVRREGIRGNNPEQARLCDLEDQAKSSKKGLWSEGGGSHTIRDLKYT
IESPRNFVDSLHQKPVNAIIEHVRDGCMVRALLLPDYYLVTVMLSGVKCPTFKREADGTE
TPEPFAAEAKFFTESRLLQRDVQIILESCPNQVILGTILHPNGNITELLLKEGFARCVDW
SMAVYTQGAEKLRAAERSAKERKVRIWKDYVAPTANLDQKDRQFVAKVMQVVNADAIVVK
LNSGENKTIHLSSIRPPRLEGEEKNKDKDKRFRPLYDIPYMFEAREFLRKKLIGKKVNVT
VDYIRAATSATEMGGIPAFPERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHY
DELLAAEARALKNGKGLHSKKEVPIHRVADISGETQKAKQFLPFLQRAGRSEAVVEYVFS
GSRLKLYMPKETCLITFLLAGIECPRGSRNMPGGMQVAEPFSEEATNFTKELVLQREVEV
EVESMDKAGNFIGWLHIEGVNLSVALVESALSKVHFTAERSSYYKTLVSAEETARQRKEK
MWANYEEKPKEEVAQFTEEKERVTKFKAVYVTEITDGLHFYAQDVETGTKLESLMESMRA
EIASQPPVEGSFSPRRGDFCIAKFADGEWYRARVEKVESPAKVHVFYIDYGNREILSSTR
LAPLPPAFSTRTLPPQATEYTFAFIQVPQDEDARADAVDSVVRDIQNTQCLLNVEYSGVV
CPHVTLQFSDSKDDVGLGLVKEGLVMVDVRKERHLQKMVTEYLNTQESAKSARLNIWRYG
DFRDDDADEFGYRR
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgcaataccgacacaagttcagtccaaccaagcttcagcttcgcagctgcag
aggggaatagtgaagatggtcttgtctggttgtgctgtcatcgttaggggtcagccgcga
ggaggaccccctccagaacggcagatcaacctgagcaacatccgagccggagctctcgcc
cgtcgcgcagttcagggtcaaccagataccaaggacacaccagatgaaccatgggctttc
caggcacgagagttcatgcgcaagaaggtaatcggcaaagaagtctgcttcactgtggag
aacaaaacccctcagggcagggagtacggcatggtctacctgggaaaagacacctcagga
gaaaatatcgcagagtctctggtggccgaaggtctcgccacagttcgcagagaaggcatc
agaggaaacaatcctgagcaggccagactgtgtgatttggaggaccaagccaagtcttct
aaaaagggtctgtggtctgaaggtggaggttcccacaccattcgagatctgaagtatacc
atcgagagtcctcgcaactttgtggactccctccatcagaaaccagtcaatgccattatt
gaacacgtgcgtgatggctgtatggtacgggcgctgcttctgcccgactactatctggtg
acagtcatgttgtctggagtcaagtgccctacgtttaaacgggaggcagatggcacagag
acccccgagccctttgcagctgaggcaaagttcttcacggagtcacgacttcttcagaga
gatgtgcaaataattttggagtcctgtcccaaccaggtcattctggggaccatcttgcac
ccgaacgggaacatcacagagttgctgttgaaggaaggctttgctcgttgtgtggactgg
tccatggctgtatacacccagggtgccgagaagctcagagcagcagaacgatcagcgaaa
gagcgcaaagtgagaatctggaaggactatgttgctcccacagccaatctggaccagaag
gacagacagtttgtagccaaggtgatgcaagtcgtgaatgcagatgccatcgtggtgaag
ctgaactctggggaaaataagaccattcacctgtccagcatcaggcccccgaggcttgaa
ggcgaggagaagaacaaggacaaagacaagcgtttccgtccactctatgacattccctac
atgtttgaggctcgggaattcttgaggaaaaagctcattggcaagaaggttaatgtcacg
gtcgattacatcagagctgccaccagtgccacggaaatgggtggcatcccggcttttcca
gagcgcacctgtgctacagtgaccattggaggaataaacattgccgaggctctggtcagt
aaaggtctcgccacagtgattagataccgtcaggacgacgatcaaagatcttcccattac
gacgagctcttggcggcagaggcaagggcgctcaagaatggcaaaggtcttcacagcaag
aaagaagtgcccattcacagggtggcagacatttcaggggagacacagaaggcgaaacag
ttcttgccattcctgcagagagcgggccgctcggaggctgtggtggagtacgtgttcagt
ggctctagactcaagctctacatgcccaaagaaacatgtctcatcaccttcctgctcgct
ggtatcgagtgtccccgagggtcccgaaacatgccaggtgggatgcaagtggcagagccg
ttcagcgaggaagccacaaacttcaccaaagagctggttcttcagagagaggtggaagtg
gaggtggaaagcatggacaaagcaggaaactttattggctggcttcacatcgagggcgtg
aatttgtctgtcgctttggtggagagcgccctctcgaaggtccacttcactgcggagaga
agctcctactacaagactctggtgtctgcggaggaaactgccagacagaggaaagagaag
atgtgggccaattatgaagagaagcctaaagaagaggtggctcagttcacagaggagaag
gaacgtgtgacgaaattcaaagccgtctatgtcacagagatcacagatggactgcacttc
tacgcacaggatgtggaaaccggtactaagctggagagtctgatggagagcatgcgagca
gagattgcctcccagcctccggtggaaggatccttttccccacgcagaggggatttctgc
atcgcaaagtttgctgacggagaatggtacagagctcgtgtcgagaaagttgaatctcca
gcaaaggttcacgtgttctacatcgactatggaaacagagagatattatcttccacacgt
cttgcaccccttcctccagccttcagcacgcgtacgcttcctccacaggctacagaatac
acatttgccttcattcaggtcccacaggatgaagacgcaagggccgacgccgttgacagt
gtggtcagggacattcaaaacacacagtgtctgctgaatgtggaatacagtggagttgtc
tgcccgcacgtcacgctgcagttctctgactcgaaagacgacgtgggtctgggtctggtg
aaggaaggccttgtcatggtggacgtacggaaagagaggcacctgcagaaaatggtgact
gaatatctgaacacccaggaatctgccaagagtgccaggcttaacatttggcgctacgga
gatttccgcgatgatgacgcggatgagttcgggtatcgccgctaa
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