Garra rufa (doctor fish): 141333752
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Entry
141333752 CDS
T11039
Symbol
hcls1
Name
(RefSeq) src substrate protein p85-like
KO
K06106
cortactin
Organism
grf Garra rufa (doctor fish)
Pathway
grf04530
Tight junction
grf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
141333752 (hcls1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
141333752 (hcls1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141333752 (hcls1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141333752 (hcls1)
Membrane trafficking [BR:
grf04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
141333752 (hcls1)
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
141333752 (hcls1)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
141333752 (hcls1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HS1_rep
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
141333752
NCBI-ProteinID:
XP_073694976
LinkDB
All DBs
Position
4:complement(23738336..23750670)
Genome browser
AA seq
524 aa
AA seq
DB search
MWKSVVGHDVNVKVESEADDWETDPNFENDVSEQEQRWGSRTIEGSGRKEHISIADLRQN
VSREHEVVKKNELDKGPKASYGYGGKFGVEKDRMDKGALGHSYVAEVEKHSSQTDAAKGF
GGKFGVQKDRVDKSAMSYEYKGQVQQHESQKDYAKGFGGKYGVQKERVDKAAVGYDYKGE
TEKHQSQKDYAKGFGGKYGVEKEKVDKAAMGYDYKGETEKHQSQKDYAKGFGGKYGVEKE
KVDKAALGYDYKGETEKHQSQKDYAKGFGGRYGVEADRMDKSAVSFSDMESPSSAYEKPQ
AFEASSVGAGNLKARFENMAKASDEENRKRAEEEKARRLAREKREQEEAQRKHEEQSRHE
EEEEVQRPPPVPASQKPKETFRKLPEIPRDEPEEEAQVEDPEPEYEEPPLLPPRADDLIE
EEEEEDQTYSECEPAPVPQEEDYEDIGSYATADSSAAVDNDYEDLSGGGQTATAIYDYQG
EASDEISFMPGDIITNVEMVDEGWWKGTCHGHTGLFPATFVELN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaatctgtggtggggcatgatgttaatgtgaaggtcgaatcagaggcggacgac
tgggaaacggatccaaattttgagaatgatgtgtcagagcaggaacagagatggggttcc
agaaccatagaaggatcaggccgaaaagaacacatcagcattgcagatctcaggcagaat
gtgtctcgggaacatgaggtggttaagaagaatgagttggacaagggccctaaagcttcc
tacggctatggagggaaatttggagttgagaaagacagaatggataagggtgctttagga
cacagctatgtggcggaggtagaaaagcactcgtcccagacagatgcagcaaagggtttc
ggagggaaatttggtgtacagaaggaccgtgtggacaagtctgccatgagctacgagtat
aagggtcaggtacagcagcatgaatctcagaaagattatgctaaaggttttggtggcaag
tatggtgtgcagaaagagagagttgacaaggccgcagtgggttatgactacaaaggcgag
actgagaaacatcagtcacagaaagactacgcaaaaggctttgggggaaaatatggtgtg
gaaaaagaaaaggttgacaaggccgcaatgggttacgactacaaaggagaaactgagaaa
catcagtcacagaaagactacgcaaaaggctttgggggaaaatatggagtggaaaaggaa
aaagttgacaaggctgctttgggttatgactataaaggagaaactgagaagcatcagtca
cagaaagactatgcaaagggttttggaggacgttatggagtcgaagcagatcgcatggat
aagagtgcagtttcattcagtgatatggagtcaccatcatcagcttatgaaaagcctcag
gcttttgaggcctcaagtgtaggagctggaaaccttaaggctcggtttgagaacatggcg
aaggcttcagatgaggagaacagaaagagagcagaggaggagaaagccagaagacttgct
cgagagaagagagaacaggaagaggcacaacgcaaacatgaggagcagagcaggcatgaa
gaggaggaagaggtccaaagaccgccacctgtgccagcatcccagaaacccaaagagacg
ttcagaaaactgcctgaaattcccagagatgaaccggaggaagaagctcaggtagaggat
cctgagcctgaatatgaggagccgccattactgccgccccgcgcagatgacctgatcgaa
gaagaggaagaggaggaccaaacttactctgaatgtgaacctgcccctgtacctcaggaa
gaagattatgaggatattggctcatatgctactgcagattcttcagcagctgttgataat
gattatgaagatctaagtgggggaggacaaacagccacagccatttatgactatcaagga
gaggccagtgacgagatctccttcatgccaggtgacatcatcactaacgtcgagatggtg
gatgagggttggtggaaaggaacgtgtcatggtcacacaggcctgtttcctgccactttt
gtggagctcaattag
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