KEGG   Garra rufa (doctor fish): 141333787
Entry
141333787         CDS       T11039                                 
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
  KO
K05636  laminin, beta 1
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04510  Focal adhesion
grf04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:grf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    141333787 (lamb1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    141333787 (lamb1b)
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMININ_IV_B EGF_LMN_ATRN LAMB1 F5_F8_type_C EGF_Teneurin LPD3
Other DBs
NCBI-GeneID: 141333787
NCBI-ProteinID: XP_073695030
LinkDB
Position
4:26930434..26970438
AA seq 1772 aa
MWILQITALTISFALHTLAQLPDNNDKCAEGSCYPATGDLLIGRAHRLAASSTCGLDGPE
TFCIVSHLQDAKNCFECDSRRIFNEFTNPYSHTIENVVTTFTPNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMMIERSSDYGESWQVYRYYAFNCAESYPQVRLGPI
KKVDDIICDSRYSGIEPSTEGEVIFRALDPAFKIPDPYSPDIQNLLKITNLRIRMEKLHT
LGDDLFDDREEVKEKYYYALYDMVVRGNCFCYGHASKCAPVGNEGGVEGMVHGHCMCNHH
TTGLNCEECEDFYQDMPWRPAVGRETNACKKCECNRHSHTCHFDMAVYISSGNRSGGVCD
DCLHNTEGQWCENCKPFYYKHSGRDIRDPRICEPCDCDPRGSLNGGLCDSATDVLRDMIA
GQCRCKANVEGQRCDHCKKGHYGLSEDPLGCRPCSCNPLGTLPAGSPCDIQTGSCYCKRL
VTGRNCDQCQPQHWGLSNDMDGCRPCDCDVGGALNNNCSRETGQCACKKHMFGRRCDQVH
SGYYFAALDHYIYEAEEASFGPEVKVLQRPLPLDRKPTWTGKGFVNVPEGETLRFNIYNL
PRSMDYNLMIRYEPLLPDEWEQVVVQIERPRGTYPAAHCRSTYNDEQTISLHPGSRYAVL
PGPVCLETGQNYTVKISFPQYSSYSYHSSPHMLVDSIVLLPEVQDLDLFSGGPQQQEDWE
MFQKYRCLERSQSVIKIPLTDICRDYILSLSVLMHNGALECKCDPQGSVSTVCDNIGGQC
QCRPNVLGKNCNTCAPATYLFGPSGCRPCGCNPLGSQNLFCHPTTGQCLCVPGAYGRQCG
NCKPNYWGFPNCQSCFCNGNSEQCHPLTGECLYCRGHTTGHNCERCESGYHRNTLLGSRE
SCRPCMCPNGPGSGMQFAESCYQNPSSLQMVCVCNSGYKGPKCEECASGYYGNPQVPGGR
CNPCQCNGNINMQDPDSCDARSGACLKCLFHTSGNACQYCSRGYYGDARTQNCRRCMCHL
VGTSRQSCVDGLCECDRVSGQCPCLTGVVGQHCDRCAPNTWNINSGKGCQPCQCHPEHSY
TSSCDLLTGQCSCQPGFGGRTCEECRELFWGNPEIQCHACDCDPRGIATQQCNKMTGECV
CVEGVAGRRCDSCGRGYVGTFPDCEACHKCFREWDVNVGELTNHTQRLVDTVEEMKETGV
ATPYKGIISSLDDDTKQLRQILEDDKVQQTLTHMQRMLQQANETASVVGKSMDRSEKNLE
KVSADHQQAVENLKSLTEEAQNLQEICSDKQQQVVNIKHSDPRGATDSIKEYYRQSGQAE
FRVNHAVSDPGSLVKGSAQIRKAAEAKLGSTENEFNLKHQLHIQRLEKIGSELDSADLSR
LSRQVCGGASGLDGCGDCGGLGCESEDGTSQCGGEECETIETRSQEALNKAKNLDQDVLH
ALKEVDKLNKMVSDARGRADEAKLNAQDVLLRANQSKARVEQTNEELRDLIQQIRDFLTN
ETDPKRIEEVANEVMKLSLPVSPGALKNVTTEIRQHVARLTQVDDILTDTAENARTAERL
LQEAQAANERATALQQTTDEVEKTLEDTESAQKAANEKLKEVESDMNQAKQQITDVQSKT
EATEFKLSSSTGRFLDLEREVEKLQQKTVETSSSADLTQKQTEYIKEEIEHADREIDTLV
QPKYQLASGLIDQKAAGVIDAHQKAEQLRQEAKDLLIDATNKLQRLRELERSFVANQHVL
VEKAQELDGLENEARDVLQELSQKVTFYSTCA
NT seq 5319 nt   +upstreamnt  +downstreamnt
atgtggattctccagattacagctcttacgatatcttttgctttgcacaccctggcacaa
ttacccgataacaatgacaagtgtgcagaggggagttgttatcctgctacgggcgatttg
ctgataggcagagcacatcggcttgcagcctcctccacctgcggactggatggacctgag
acattctgcattgtgagccatttgcaggatgcgaagaactgtttcgaatgtgattcccga
cggatattcaatgagttcaccaacccctacagccacaccattgagaacgtggtgacgacc
ttcactcccaaccgcctcaaaacctggtggcagtccgagaacggagttgaaaatgtgacc
attcagctggatttggaagcagaattccactttacacacctcatcatgacctttaagacc
ttccggccagcagccatgatgattgagcgttcatcagattatggggagagctggcaggtt
taccgttactacgctttcaactgcgctgaatcctatccgcaagtccgtctggggccaatc
aaaaaagtggatgatattatttgtgacagccgctattcaggcattgagccatcaacagaa
ggagaagtaatttttagggcacttgatcctgcatttaagattcctgacccttacagccca
gacattcagaacctactgaagatcaccaacttgcgcatacggatggaaaagttgcacact
ctaggagatgatctgtttgatgaccgtgaggaagtgaaagagaaatactattatgctctc
tacgacatggtcgtccgtggcaattgtttctgctatggccatgcctccaaatgtgcacca
gtcggcaatgagggaggggtcgagggcatggttcatggtcattgcatgtgtaatcaccac
actactggactgaactgtgaagagtgtgaagacttttaccaagatatgccctggagacca
gcggtgggcagagagacaaatgcatgcaagaaatgcgagtgtaaccgtcactcgcatacc
tgtcattttgacatggcggtgtatatatcatcgggaaataggagtggaggagtatgtgat
gactgtctgcacaacacagagggccagtggtgtgagaactgcaaacccttttactacaag
cactctggcagagacatcagagaccccaggatctgtgagccctgtgattgtgacccgcgt
ggttctctaaacggaggcttatgtgacagcgctacggatgttctaagagatatgattgcc
ggacagtgtcgttgcaaagctaatgtggagggtcaacgttgtgaccactgtaaaaaggga
cactatggcctcagcgaagacccgttaggctgtcggccatgcagctgtaaccctctaggc
acactcccagcaggaagtccctgtgatatacagacaggaagctgttactgcaaacggctt
gtgactggacggaattgtgaccagtgtcagccccagcactggggtctcagtaatgatatg
gatggctgcagaccatgtgactgtgatgtaggtggagctttgaataataattgttctcgg
gagacagggcagtgtgcttgtaagaagcatatgttcggtaggcgttgtgaccaggtgcat
tctgggtactactttgcagcactggaccattatatttatgaagctgaggaggcttccttt
ggaccggaagtaaaagtgcttcagagaccgttacctttggaccgtaaacccacctggacg
ggtaaaggatttgtgaacgtaccagagggtgaaacactgaggttcaacatttacaattta
ccacgatctatggactacaacttaatgatccgctatgaaccactgttgccagatgaatgg
gagcaggttgtagtacagatagagcggcccagaggcacttacccagcagcacactgcaga
tctacgtacaatgatgagcagacaatctcactgcaccctggatccagatatgcagttctg
cctggtccagtgtgtttggaaacgggtcagaattacacagtgaaaattagcttcccacag
tactcatcgtacagctatcactcttctcctcacatgcttgttgattcaatagtgcttttg
ccagaggttcaagacctggatctattttctggcggaccccagcagcaggaagactgggag
atgttccagaaatacagatgtttggaacgcagccagagtgttattaaaatccccttaacg
gatatttgcagagattacatcttaagtttgtcggtactgatgcacaatggagctctggaa
tgtaagtgtgacccccaaggttctgtaagcacagtgtgtgacaatatcggtgggcagtgc
cagtgtcgacccaacgttttgggcaagaactgcaacacctgtgccccggccacctacctg
tttggaccctcgggatgtagaccatgtggctgtaacccactgggctctcagaaccttttc
tgccaccccaccactggtcagtgtttatgtgtgccaggggcatatgggcgccaatgcggc
aactgtaagcccaactattggggtttccctaactgccagtcctgcttctgtaacgggaac
agtgaacagtgccacccacttacaggcgagtgtctgtactgcaggggtcacaccacaggc
cacaactgtgagaggtgcgaaagtggttatcaccgtaacacacttctgggctccagggag
tcgtgtcgcccttgtatgtgtcctaacggacctggaagtggaatgcagtttgctgagagc
tgttaccaaaatcccagttctctccaaatggtctgtgtgtgcaactcaggctacaaagga
cctaagtgtgaggaatgtgcctctggctactatgggaaccctcaggtaccaggagggcgg
tgcaatccgtgtcagtgtaacggtaatattaatatgcaggatcctgactcatgtgacgcc
cgctctggtgcctgtctaaaatgcctgtttcacacctctggtaatgcgtgccaatactgc
agccgtggttattatggagacgcccgtactcagaactgcaggagatgtatgtgtcatctt
gtgggaacttccaggcagagttgtgttgatggcctgtgtgagtgtgacagggttagtggg
cagtgcccatgtctgaccggcgtggtgggtcagcactgtgaccgctgtgcccccaacaca
tggaacatcaacagtggcaaaggatgccaaccttgccagtgtcaccctgaacattcttac
acatcctcctgtgacctgctgactggtcagtgttcctgtcagcctggttttggaggtagg
acatgtgaggagtgcagggaactgttctggggcaatcctgagatccagtgccatgcatgc
gactgtgacccacgaggcattgccactcagcagtgtaataagatgactggcgagtgtgtg
tgcgtagagggcgtggccgggcggagatgtgactcgtgtgggcgtggctacgttgggacc
tttcctgactgcgaggcctgtcataagtgtttccgtgaatgggatgttaatgtgggagag
ctgaccaatcacacacagagactggtggatacggtggaggaaatgaaagagactggcgtg
gctacgccctataaaggcatcatatcaagtctggatgatgacaccaaacagcttagacag
attctagaagatgacaaggttcagcaaacgctcacacacatgcagaggatgctgcagcaa
gccaatgagacagcatcagtcgtgggaaagtctatggaccgatctgaaaaaaatttggag
aaggtatctgctgaccatcagcaggctgtggagaacttaaaaagcctgactgaggaagcc
caaaatctacaggagatctgctctgacaaacagcagcaggttgtgaacatcaaacattca
gatcccagaggtgcgaccgacagcatcaaagagtactacagacaatctggccaggcagag
tttcgtgtcaatcatgccgtctccgacccaggaagtttggttaaagggtctgcccagata
cggaaagctgcagaggccaaactaggcagcacagagaatgaatttaacctgaaacatcag
ctgcatatacagaggctggagaaaattggatctgaactggactccgcagacctgtcacga
ctaagccgtcaggtgtgtggaggggcatcaggtctagatggttgcggtgactgtggtggt
ctgggatgtgagagcgaggatggcacgtcccagtgtggtggggaagaatgtgagactatt
gagacacgatcccaggaggctttgaacaaagctaaaaacttagaccaagatgtcctgcat
gctttaaaagaagtagacaagctaaacaagatggtgtcagatgctcgaggacgtgcggat
gaggccaaactcaatgctcaggatgtgttactaagagccaatcaaagcaaagcacgagtt
gaacagaccaatgaagagctcagagacctcattcagcaaatacgagacttcctcacaaat
gaaactgatccaaagcgtatagaggaagtagcaaatgaggtgatgaaactgagtttgcca
gtgtcgcccggtgcactaaagaacgtgaccacagagatacgccaacatgtggccagactg
acccaggtggacgacattctgaccgatactgcagagaatgcgcgcactgcagagagactc
ctgcaagaagcacaggctgccaatgagagagctacagcacttcaacaaaccactgatgag
gtggagaaaactctagaggatactgagagcgctcaaaaagctgccaatgaaaaactgaaa
gaggttgagagtgacatgaaccaagcaaaacaacaaatcactgatgtacagtcaaaaact
gaagcgactgagttcaaactgagtagcagcacaggaagatttctggatcttgaaagagag
gttgaaaaactccaacagaaaactgttgaaacgtccagcagtgcagatctaactcagaaa
caaactgagtacatcaaagaagaaattgagcacgccgatcgggagattgacacactcgtg
caacctaagtaccaactggccagtggtctgatagatcaaaaggcagcaggtgtgattgat
gcacatcagaaggctgaacaactacgtcaggaggcaaaagatctattaatagatgccaca
aacaaactacaaagactaagagagctggagagatcatttgtggcaaatcagcatgttcta
gtggagaaagctcaggagctggatgggctggagaatgaggccagagatgtactgcaagaa
ctcagtcagaaagtcaccttctacagcacctgtgcttaa

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