Garra rufa (doctor fish): 141333787
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Entry
141333787 CDS
T11039
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04510
Focal adhesion
grf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141333787 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141333787 (lamb1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
EGF_Teneurin
LPD3
Motif
Other DBs
NCBI-GeneID:
141333787
NCBI-ProteinID:
XP_073695030
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Position
4:26930434..26970438
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AA seq
1772 aa
AA seq
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MWILQITALTISFALHTLAQLPDNNDKCAEGSCYPATGDLLIGRAHRLAASSTCGLDGPE
TFCIVSHLQDAKNCFECDSRRIFNEFTNPYSHTIENVVTTFTPNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMMIERSSDYGESWQVYRYYAFNCAESYPQVRLGPI
KKVDDIICDSRYSGIEPSTEGEVIFRALDPAFKIPDPYSPDIQNLLKITNLRIRMEKLHT
LGDDLFDDREEVKEKYYYALYDMVVRGNCFCYGHASKCAPVGNEGGVEGMVHGHCMCNHH
TTGLNCEECEDFYQDMPWRPAVGRETNACKKCECNRHSHTCHFDMAVYISSGNRSGGVCD
DCLHNTEGQWCENCKPFYYKHSGRDIRDPRICEPCDCDPRGSLNGGLCDSATDVLRDMIA
GQCRCKANVEGQRCDHCKKGHYGLSEDPLGCRPCSCNPLGTLPAGSPCDIQTGSCYCKRL
VTGRNCDQCQPQHWGLSNDMDGCRPCDCDVGGALNNNCSRETGQCACKKHMFGRRCDQVH
SGYYFAALDHYIYEAEEASFGPEVKVLQRPLPLDRKPTWTGKGFVNVPEGETLRFNIYNL
PRSMDYNLMIRYEPLLPDEWEQVVVQIERPRGTYPAAHCRSTYNDEQTISLHPGSRYAVL
PGPVCLETGQNYTVKISFPQYSSYSYHSSPHMLVDSIVLLPEVQDLDLFSGGPQQQEDWE
MFQKYRCLERSQSVIKIPLTDICRDYILSLSVLMHNGALECKCDPQGSVSTVCDNIGGQC
QCRPNVLGKNCNTCAPATYLFGPSGCRPCGCNPLGSQNLFCHPTTGQCLCVPGAYGRQCG
NCKPNYWGFPNCQSCFCNGNSEQCHPLTGECLYCRGHTTGHNCERCESGYHRNTLLGSRE
SCRPCMCPNGPGSGMQFAESCYQNPSSLQMVCVCNSGYKGPKCEECASGYYGNPQVPGGR
CNPCQCNGNINMQDPDSCDARSGACLKCLFHTSGNACQYCSRGYYGDARTQNCRRCMCHL
VGTSRQSCVDGLCECDRVSGQCPCLTGVVGQHCDRCAPNTWNINSGKGCQPCQCHPEHSY
TSSCDLLTGQCSCQPGFGGRTCEECRELFWGNPEIQCHACDCDPRGIATQQCNKMTGECV
CVEGVAGRRCDSCGRGYVGTFPDCEACHKCFREWDVNVGELTNHTQRLVDTVEEMKETGV
ATPYKGIISSLDDDTKQLRQILEDDKVQQTLTHMQRMLQQANETASVVGKSMDRSEKNLE
KVSADHQQAVENLKSLTEEAQNLQEICSDKQQQVVNIKHSDPRGATDSIKEYYRQSGQAE
FRVNHAVSDPGSLVKGSAQIRKAAEAKLGSTENEFNLKHQLHIQRLEKIGSELDSADLSR
LSRQVCGGASGLDGCGDCGGLGCESEDGTSQCGGEECETIETRSQEALNKAKNLDQDVLH
ALKEVDKLNKMVSDARGRADEAKLNAQDVLLRANQSKARVEQTNEELRDLIQQIRDFLTN
ETDPKRIEEVANEVMKLSLPVSPGALKNVTTEIRQHVARLTQVDDILTDTAENARTAERL
LQEAQAANERATALQQTTDEVEKTLEDTESAQKAANEKLKEVESDMNQAKQQITDVQSKT
EATEFKLSSSTGRFLDLEREVEKLQQKTVETSSSADLTQKQTEYIKEEIEHADREIDTLV
QPKYQLASGLIDQKAAGVIDAHQKAEQLRQEAKDLLIDATNKLQRLRELERSFVANQHVL
VEKAQELDGLENEARDVLQELSQKVTFYSTCA
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgtggattctccagattacagctcttacgatatcttttgctttgcacaccctggcacaa
ttacccgataacaatgacaagtgtgcagaggggagttgttatcctgctacgggcgatttg
ctgataggcagagcacatcggcttgcagcctcctccacctgcggactggatggacctgag
acattctgcattgtgagccatttgcaggatgcgaagaactgtttcgaatgtgattcccga
cggatattcaatgagttcaccaacccctacagccacaccattgagaacgtggtgacgacc
ttcactcccaaccgcctcaaaacctggtggcagtccgagaacggagttgaaaatgtgacc
attcagctggatttggaagcagaattccactttacacacctcatcatgacctttaagacc
ttccggccagcagccatgatgattgagcgttcatcagattatggggagagctggcaggtt
taccgttactacgctttcaactgcgctgaatcctatccgcaagtccgtctggggccaatc
aaaaaagtggatgatattatttgtgacagccgctattcaggcattgagccatcaacagaa
ggagaagtaatttttagggcacttgatcctgcatttaagattcctgacccttacagccca
gacattcagaacctactgaagatcaccaacttgcgcatacggatggaaaagttgcacact
ctaggagatgatctgtttgatgaccgtgaggaagtgaaagagaaatactattatgctctc
tacgacatggtcgtccgtggcaattgtttctgctatggccatgcctccaaatgtgcacca
gtcggcaatgagggaggggtcgagggcatggttcatggtcattgcatgtgtaatcaccac
actactggactgaactgtgaagagtgtgaagacttttaccaagatatgccctggagacca
gcggtgggcagagagacaaatgcatgcaagaaatgcgagtgtaaccgtcactcgcatacc
tgtcattttgacatggcggtgtatatatcatcgggaaataggagtggaggagtatgtgat
gactgtctgcacaacacagagggccagtggtgtgagaactgcaaacccttttactacaag
cactctggcagagacatcagagaccccaggatctgtgagccctgtgattgtgacccgcgt
ggttctctaaacggaggcttatgtgacagcgctacggatgttctaagagatatgattgcc
ggacagtgtcgttgcaaagctaatgtggagggtcaacgttgtgaccactgtaaaaaggga
cactatggcctcagcgaagacccgttaggctgtcggccatgcagctgtaaccctctaggc
acactcccagcaggaagtccctgtgatatacagacaggaagctgttactgcaaacggctt
gtgactggacggaattgtgaccagtgtcagccccagcactggggtctcagtaatgatatg
gatggctgcagaccatgtgactgtgatgtaggtggagctttgaataataattgttctcgg
gagacagggcagtgtgcttgtaagaagcatatgttcggtaggcgttgtgaccaggtgcat
tctgggtactactttgcagcactggaccattatatttatgaagctgaggaggcttccttt
ggaccggaagtaaaagtgcttcagagaccgttacctttggaccgtaaacccacctggacg
ggtaaaggatttgtgaacgtaccagagggtgaaacactgaggttcaacatttacaattta
ccacgatctatggactacaacttaatgatccgctatgaaccactgttgccagatgaatgg
gagcaggttgtagtacagatagagcggcccagaggcacttacccagcagcacactgcaga
tctacgtacaatgatgagcagacaatctcactgcaccctggatccagatatgcagttctg
cctggtccagtgtgtttggaaacgggtcagaattacacagtgaaaattagcttcccacag
tactcatcgtacagctatcactcttctcctcacatgcttgttgattcaatagtgcttttg
ccagaggttcaagacctggatctattttctggcggaccccagcagcaggaagactgggag
atgttccagaaatacagatgtttggaacgcagccagagtgttattaaaatccccttaacg
gatatttgcagagattacatcttaagtttgtcggtactgatgcacaatggagctctggaa
tgtaagtgtgacccccaaggttctgtaagcacagtgtgtgacaatatcggtgggcagtgc
cagtgtcgacccaacgttttgggcaagaactgcaacacctgtgccccggccacctacctg
tttggaccctcgggatgtagaccatgtggctgtaacccactgggctctcagaaccttttc
tgccaccccaccactggtcagtgtttatgtgtgccaggggcatatgggcgccaatgcggc
aactgtaagcccaactattggggtttccctaactgccagtcctgcttctgtaacgggaac
agtgaacagtgccacccacttacaggcgagtgtctgtactgcaggggtcacaccacaggc
cacaactgtgagaggtgcgaaagtggttatcaccgtaacacacttctgggctccagggag
tcgtgtcgcccttgtatgtgtcctaacggacctggaagtggaatgcagtttgctgagagc
tgttaccaaaatcccagttctctccaaatggtctgtgtgtgcaactcaggctacaaagga
cctaagtgtgaggaatgtgcctctggctactatgggaaccctcaggtaccaggagggcgg
tgcaatccgtgtcagtgtaacggtaatattaatatgcaggatcctgactcatgtgacgcc
cgctctggtgcctgtctaaaatgcctgtttcacacctctggtaatgcgtgccaatactgc
agccgtggttattatggagacgcccgtactcagaactgcaggagatgtatgtgtcatctt
gtgggaacttccaggcagagttgtgttgatggcctgtgtgagtgtgacagggttagtggg
cagtgcccatgtctgaccggcgtggtgggtcagcactgtgaccgctgtgcccccaacaca
tggaacatcaacagtggcaaaggatgccaaccttgccagtgtcaccctgaacattcttac
acatcctcctgtgacctgctgactggtcagtgttcctgtcagcctggttttggaggtagg
acatgtgaggagtgcagggaactgttctggggcaatcctgagatccagtgccatgcatgc
gactgtgacccacgaggcattgccactcagcagtgtaataagatgactggcgagtgtgtg
tgcgtagagggcgtggccgggcggagatgtgactcgtgtgggcgtggctacgttgggacc
tttcctgactgcgaggcctgtcataagtgtttccgtgaatgggatgttaatgtgggagag
ctgaccaatcacacacagagactggtggatacggtggaggaaatgaaagagactggcgtg
gctacgccctataaaggcatcatatcaagtctggatgatgacaccaaacagcttagacag
attctagaagatgacaaggttcagcaaacgctcacacacatgcagaggatgctgcagcaa
gccaatgagacagcatcagtcgtgggaaagtctatggaccgatctgaaaaaaatttggag
aaggtatctgctgaccatcagcaggctgtggagaacttaaaaagcctgactgaggaagcc
caaaatctacaggagatctgctctgacaaacagcagcaggttgtgaacatcaaacattca
gatcccagaggtgcgaccgacagcatcaaagagtactacagacaatctggccaggcagag
tttcgtgtcaatcatgccgtctccgacccaggaagtttggttaaagggtctgcccagata
cggaaagctgcagaggccaaactaggcagcacagagaatgaatttaacctgaaacatcag
ctgcatatacagaggctggagaaaattggatctgaactggactccgcagacctgtcacga
ctaagccgtcaggtgtgtggaggggcatcaggtctagatggttgcggtgactgtggtggt
ctgggatgtgagagcgaggatggcacgtcccagtgtggtggggaagaatgtgagactatt
gagacacgatcccaggaggctttgaacaaagctaaaaacttagaccaagatgtcctgcat
gctttaaaagaagtagacaagctaaacaagatggtgtcagatgctcgaggacgtgcggat
gaggccaaactcaatgctcaggatgtgttactaagagccaatcaaagcaaagcacgagtt
gaacagaccaatgaagagctcagagacctcattcagcaaatacgagacttcctcacaaat
gaaactgatccaaagcgtatagaggaagtagcaaatgaggtgatgaaactgagtttgcca
gtgtcgcccggtgcactaaagaacgtgaccacagagatacgccaacatgtggccagactg
acccaggtggacgacattctgaccgatactgcagagaatgcgcgcactgcagagagactc
ctgcaagaagcacaggctgccaatgagagagctacagcacttcaacaaaccactgatgag
gtggagaaaactctagaggatactgagagcgctcaaaaagctgccaatgaaaaactgaaa
gaggttgagagtgacatgaaccaagcaaaacaacaaatcactgatgtacagtcaaaaact
gaagcgactgagttcaaactgagtagcagcacaggaagatttctggatcttgaaagagag
gttgaaaaactccaacagaaaactgttgaaacgtccagcagtgcagatctaactcagaaa
caaactgagtacatcaaagaagaaattgagcacgccgatcgggagattgacacactcgtg
caacctaagtaccaactggccagtggtctgatagatcaaaaggcagcaggtgtgattgat
gcacatcagaaggctgaacaactacgtcaggaggcaaaagatctattaatagatgccaca
aacaaactacaaagactaagagagctggagagatcatttgtggcaaatcagcatgttcta
gtggagaaagctcaggagctggatgggctggagaatgaggccagagatgtactgcaagaa
ctcagtcagaaagtcaccttctacagcacctgtgcttaa
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integrated database retrieval system