Garra rufa (doctor fish): 141333865
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Entry
141333865 CDS
T11039
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
grf Garra rufa (doctor fish)
Pathway
grf04010
MAPK signaling pathway
grf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141333865 (cacna1ha)
04020 Calcium signaling pathway
141333865 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141333865 (cacna1ha)
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
141333865 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
141333865
NCBI-ProteinID:
XP_073695126
LinkDB
All DBs
Position
1:complement(32758618..32837122)
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AA seq
2211 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDLKCQSEWCVVLQAFDDCIFAFFAVEMVIKMIALGIFGSKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFMPDNVKALYNLSHMSQYYKNEEGED
NPFICSSNKENGMLRCSQVPPLKEGVECTLNVSPLGHAYSGLDGTGNSSCVNWNQLYSEC
KHGDFNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGS
FFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTLASYSEPGSCYEEMLRYISHL
YRKVKRRASRIYSGWQSKRRKKVNPNSGLSGGGGGGSGGGANGHSRHRGGGHWVRSIHNL
IQQHQRQHCHLSNGSPSPVTATGPGEALEMRSIATGPQLTVSSQPTAMHNLSSRTQSVHS
IYQGDFQEAPQGRTSAAVGVPALGRLNGGMNYPTILPSLICSYTGSSSAGKGRRESDTNT
GCDAIDPFEKLHQLMGEHSHSRVLLQMAGVVPSPLLLELLSCPYCSRALENLDVELSDSD
YSRSEGDVVYEFTHGAEFKPCRAPHHKILEERNRLAQYWEDFRDRLRRIVDSKYFNRGIM
IAILINTLSMGIEYHEQPEELTNVLEISNIVFTSMFVLEMLFKLLAFGLFGYIKNPYNIF
DGIIVVISVWEIIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCM
LLMLFIFTFSILGMHLFGCKFSVKMENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVL
YNGMASTTPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANKSDADEEKRSVNFEE
EEKMGELRATELKMYSLMMSANGHVDPRGTLPPPIIMRTAATPMPTPKSSLGPESVFGLT
ESRRGSGISIDPNAFDQKSLTSPRRSPCHPRGSGSNWGSRRSSWNSLGRAPSLKRKDTSG
ERESLLSGEGRGSFEDDDLEGEKLANISGGSLQHPSSLDIPELPQTPSFSSLGDYHDCNG
RSLHLPTDLSANLSKEDSIGEEDMDDSFCFRLKRTFEAYKPKWCKDHEDWSLYLFSPQNK
FRMMCQRLISHKMFDHVVLVFIFLNCITIALERPSIPQSERKFLIISNYVFTVIFVAEMT
VKVVALGFCAGKHSYLQSTWNVLDGVLVFVSLLDILVSLAYTGGNRILGILRVLRLLRTL
RPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGGDT
KNITNKSECLQANYKWIRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDKQPE
RNYNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRQRLLEKK
RRSKANCGSEAQQRPYYADYSPARLYIHTLCTNHYLDLFITCIIGINVVTMSIEHFNQPQ
YLEEALKYCNYVFTVIFVIEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEINM
NAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVMQALPQVGNLGLLFMLLFFIY
AALGVELFGKLECNDNNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECLP
SESNCFSYLPLVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELE
MEMARRLSNVSAVSSSGPEGRATYVGPGPDSPGQDEGMQRTQENFLSPRKMSVSRMHSLP
NDSYMFRPVRPASAPYPLEEVETSQGYLELGSITSVHSQPCESHSLLQVPGVPPHSQFNY
LPKIPPPMPSPTHSIGRTLRRQEAIKNDSIDVQSFDSKDNPDRRAGKTTGSFKLHVPRIT
GPSIPQGSPKLPPRGHAPSVCTFQQPHSQHNIPSRSPSLASSSRSTSPSGSMFDSADPTD
EEVRHINSSARLWVGVQAEARSHSLSPYTTSGMLLPVPVKNCSSAANLSVKDPKKCFSVD
TEGFLEKPYSADDHRRHSIEICSSVDEGLFGQELSEKRHVPMRGQSLHIPRKKKMSPPCI
SIEPPFETGAPASLASMKKLSESSMLLRRRTPSYDLALQRDSLDLPENQLSTQPLIKVER
HPSHCAEYLSLPHPTPMGSLAGILCDSTQPPPFDSRFEESTDFSSANRTAQ
NT seq
6636 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgattctgctgaactgtgtgactctgggcatgttccagccatgtgaggacctc
aagtgccagtctgagtggtgtgtcgtcctacaggcatttgatgactgcatcttcgccttc
tttgctgtggagatggtcatcaaaatgatagccctggggatttttggatcaaagtgttac
cttggcgacacgtggaaccgcctggacttcttcattgtcatggcagggatgatggagtat
tcactggacggtcataacgccagcctgtcagccatccggactgtgcgagtgctcaggccc
ctgcgagccatcaacagagtgcctagtatgaggatactggtgactctgcttcttgatact
ctgcctatgttaggcaacgtcctcctgctgtgcttttttgtcttctttatattcggcatt
gtcggggtgcaactgtgggctggacttcttaggaatcggtgtttcatgccagataacgtg
aaagccctttataatctgtcacacatgagtcagtactacaagaatgaagaaggtgaggac
aaccccttcatctgctcctccaataaggagaatggcatgctgcgctgtagtcaggtgccc
cccctcaaggagggtgttgagtgcactttaaatgtgtctccactgggacatgcctactct
ggcctggatgggacaggcaacagcagctgtgttaactggaaccagctttacagtgagtgt
aagcacggggatttcaacccacacaaaggggcagtgaacttcgataacattggatacgcc
tggattgcgatattccaggttattactttggaaggatgggtggacatcatgtactacgtt
atggatgcccactccttttacaattttatatattttatattgcttattatagtgggttcc
ttcttcatgatcaacctgtgcctggttgtaatagcaacccagttctcagaaacaaagcag
cgcgagaaccagctgatgcaggagcagcgagcacgttacctctccaacgacagcaccctc
gccagctactctgagccggggagctgctacgaggagatgctcaggtacatcagccacctg
taccgcaaggtgaagcgccgtgcttcccgcatctacagcggctggcagagcaaacgcaga
aagaaggtgaaccccaacagcgggctgagtgggggaggaggaggaggcagtggtggtggg
gccaatggtcacagcaggcacaggggtggcggacactgggttcgctccatccacaacctc
attcaacagcaccaacgacagcactgtcacctcagcaatggcagccccagtcctgtgacc
gctacagggcccggcgaggctctggaaatgaggtccatcgcaacggggccgcaactgacc
gtgtcctcacagccaaccgccatgcacaatctttcttccaggactcagtcagtgcacagc
atctatcaaggtgactttcaggaggccccgcaagggcgaacgagcgctgcggtgggcgtg
cccgcactcgggcgactaaacgggggcatgaattatccgaccatcttgccctccctcatt
tgcagctatacaggcagcagttctgcagggaaaggaaggagggagtcagatacaaataca
ggatgtgatgcgattgatccctttgagaagctgcaccagctcatgggagaacatagccac
agtcgtgtactgctgcagatggctggtgtggtgcccagtccgttgcttcttgagctcctg
agttgcccatattgttcaagggcactagagaacctggatgtggagctcagtgattcagac
tactccagatcagaaggggatgtggtgtacgagttcacccatggagcagagttcaaaccc
tgccgtgcaccccatcataaaatactggaggagcgtaaccgcctggctcagtactgggag
gatttccgggacagattgagacgcatagtggatagcaaatactttaatcgaggaattatg
attgccatcctcatcaacaccttgagcatggggattgaataccatgagcagcccgaggag
ctgacaaatgtcctggagattagcaacatcgtcttcactagcatgtttgtccttgaaatg
ctcttcaaactgctggcctttggcctcttcggctatatcaagaacccctacaacatcttt
gatgggattattgtagttataagtgtgtgggagatcataggacaggcggatgggggtctt
tcagtgctgaggacgtttcgtctcctgcgtgtgctcaaactggtgcgcttcctccctgca
ctgcgcagacagctggtggtgctaatgaagaccatggacaatgtggcaactttctgcatg
ctgctcatgcttttcatcttcacattcagcattcttggaatgcatctgtttggatgcaaa
ttcagcgtgaagatggagaatggagacacaattccagacaggaaaaactttgattccttg
ctgtgggccattgtcactgtgtttcagattctgacccaggaagactggaatgttgtcctc
tataatggaatggcttccaccaccccatgggcggctctttactttgtggctctgatgaca
tttgggaattatgtgctctttaacctactggtggccatcttagtggaggggtttcaggca
gagggagatgctaacaagtcagatgcggatgaggaaaagcggtcagtgaactttgaagag
gaggagaagatgggggaattacgagctacagagttgaagatgtactctctgatgatgtca
gccaatgggcatgtggatcctcgaggcactttgccccctccaatcatcatgcgcactgct
gccacccccatgcccactccaaagagctcactcggtcccgagtctgtgtttggtttgact
gagtccaggcggggcagtgggatctcaatagatccaaatgcatttgatcaaaaatccctg
actagcccaagaagatctccatgccaccctcgtggctcgggcagtaactggggaagtcgc
aggtcaagctggaacagcttaggaagggcaccaagtttgaaaaggaaggacacgtctggg
gagagggagtctctgctgtctggggagggcaggggcagctttgaggacgacgacttggag
ggtgagaagctggccaatatcagtgggggctcactgcagcatcccagctctctggatatc
cctgaactgcctcaaacccccagcttcagctcactgggagactaccacgactgcaatgga
agaagcctgcacctgcccactgacctgtccgccaatctcagcaaagaagactccattgga
gaggaagacatggatgatagcttctgtttccgtctcaagaggacgtttgaagcatataaa
cctaagtggtgtaaagatcatgaagactggtccctttatctattctctcctcagaacaag
tttcggatgatgtgtcaaaggttaatttctcacaagatgtttgatcatgtagtcttggtg
ttcatcttcctaaactgcattaccattgctctggaaagaccctctattccgcagtctgag
cggaagttcctcattatctccaattatgttttcactgtgatttttgttgctgaaatgact
gtgaaggtggtggcccttggtttctgtgccgggaagcacagttatctgcagagcacctgg
aatgttctggatggggtgctggtctttgtctctctccttgacattttggtctctctggcc
tacactggtggaaaccgaatccttggcatcctgagggttcttcgtctgctgagaactctg
cggccgctgagagtgattagtcgtgctcctgggctgaagctggtggtggaaacgctaata
acgtccctgaggcctattggaaatattgtgctgatctgctgtgccttctttattgtcttt
ggcattcttggagttcagctcttcaaaggaaagttttaccattgtgaaggtggcgacacc
aagaacatcaccaataagtctgaatgtcttcaagctaactacaaatggattcggagaaag
tacaactttgacaacttgggacaggctctcatgtcgctgttcgtgctttcctgtaaggac
ggatgggtcaatataatgtatgacgggttggacgctgttggggtggacaagcagcctgag
cgcaattacaacccctggatgctcctctacttcatctctttcctgctgatcgtcagcttc
tttgtgctgaacatgtttgtgggagtggtggtggagaactttcacaagtgtcgtcaggac
caggaggaagaggaggcgcgcctgcgtgaggagaagagacagagactgctggagaaaaag
cgcaggagtaaggcgaattgcgggtctgaggcccagcagagaccgtactatgcagattac
tctccagcccggctctacatccacacactgtgtaccaaccactacctggacctcttcatc
acctgcatcatcggcattaacgtggtcactatgtctattgagcacttcaatcagcctcag
taccttgaagaggcactgaaatactgtaactacgtctttaccgtcatcttcgtaattgag
gctttgctcaagcttgtggcatttggttttcggagattcttcaaagacagatggaaccag
ctggatctagccatagtcctgctctctatcatgggcatcaccctggaggagatcaatatg
aatgcagcgctgccaatcaaccccaccatcatccgcattatgagggtgctgagaatagcc
agagtattgaagcttttgaagatggctacaggcatgagagccctgctagacacagttatg
caggctttaccacaggtgggaaatctaggcttgctgtttatgctcctcttcttcatttat
gcggcacttggtgtggagctttttgggaaactagaatgcaatgacaacaacccatgcgaa
ggattaagcagacatgctacatttgagaactttggaatggcctttttaacactattcaga
gtatcgacgggggacaactggaatggcataatgaaggacactctgcgagagtgccttcca
agtgaaagtaactgcttcagctatctgcccctggtctcccccatctacttcgtcaccttt
gtgctaatggctcagttcgtgctggttaatgtggtggtggctgtattgatgaaacacctg
gaggagagcaataaggaggctaaagaagatgcagaaatggacgctgagattgagttggag
atggaaatggctcggcgtctcagcaacgtctcggcagtgagctcttcagggccggaagga
agggcaacttatgtaggaccgggcccagattcacctggacaggatgaggggatgcaaaga
acacaggagaattttctctctccacggaaaatgtcagtgtcgaggatgcactctttgccc
aatgacagctacatgtttcgccctgtgaggccagccagtgctccttatccacttgaagaa
gtggaaaccagtcaagggtaccttgaattaggctctatcacctcagtccactctcagcca
tgcgaaagccattccctgctccaggtccccggtgttcctccccattcccagttcaactac
ctccccaagattccccctcccatgccctctccaacccacagcataggcaggactttacgc
agacaggaggcaattaaaaacgactccattgacgtgcaaagtttcgactccaaagacaat
cccgacagacgggcagggaaaactacgggcagcttcaagctgcacgttcctcggatcacc
ggccccagcatccctcaggggtcacccaagctgcccccacgtggacatgcacccagtgtc
tgcaccttccagcagccccatagccagcacaatatcccgtcccgatctcccagcctggcc
agcagcagcagaagcaccagccccagtggctccatgtttgattccgctgatccgaccgac
gaggaggtgcgccacatcaacagttcagcacggctgtgggtaggggttcaggcagaagcc
cggagtcactccctgtctccttacacgacctcagggatgttgcttcccgtcccagtgaag
aactgcagcagcgctgccaatttaagcgtcaaggacccgaagaagtgctttagcgtggac
acggagggttttctggaaaaaccctacagtgccgatgaccatcgcaggcactcgattgag
atttgctcctcagtagatgaagggctgtttgggcaagaactcagtgagaagaggcacgtt
ccaatgcgtggacagtctttgcacattccccgcaagaaaaagatgagccctccttgtatc
tccatcgagccaccgtttgaaacgggggctcctgcctctctcgcatccatgaaaaagttg
tcggagagcagcatgttactacggaggaggacgccatcctatgacctggcactgcagcga
gactctctggatttgccggagaaccagctgtctacccaaccgctcatcaaagtagagcgg
cacccctctcactgtgccgaatatctgtccctgccgcaccccactccgatgggcagcctg
gcaggcattttgtgcgatagcacacagccgccgccctttgatagcagatttgaagaatcc
acagacttcagttctgcaaacaggacagcccaatga
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