Garra rufa (doctor fish): 141334291
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Entry
141334291 CDS
T11039
Symbol
ungb
Name
(RefSeq) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
141334291 (ungb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
grf03400
]
141334291 (ungb)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
141334291 (ungb)
DNA repair and recombination proteins [BR:
grf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
141334291 (ungb)
Prokaryotic type
141334291 (ungb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
141334291
NCBI-ProteinID:
XP_073695436
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All DBs
Position
5:complement(32897115..32899731)
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AA seq
250 aa
AA seq
DB search
MQLSEDQLHQIEQNRRAALERLASRNVPVPVGESWRKQIGAEFTKPYFTKLMSFVAMERK
CCTVYPSPEQMFHCTTLCPIEDVKVVILGQDPYHHPGQAHGLAFSVLRPKPPPPSLENIF
TELKEDIVGFQQPGHGDLTGWAKQGVLLLNSVLTVRALQPTSHEGQGWEIFTDAVVLWLS
RNLSGLVFLLWGSYAQRKGRVIDRKRHHVLETSHPSPYSAHLGFFGCRHFSKANMLLKAS
GKKPVDWTAL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcagcgaggaccagctgcatcagatagagcaaaacagacgtgctgcactggaa
cggctggctagccgaaatgtacctgtacccgttggtgaaagctggcgaaaacaaattggg
gctgaatttacaaaaccttattttacaaaactgatgtcttttgttgcaatggagaggaaa
tgctgcactgtgtatcccagccctgagcaaatgtttcattgtacaactttgtgtccaatt
gaagatgtaaaagtggtcattcttgggcaagacccctatcaccatccaggacaggctcat
ggtttggccttcagtgtgctaaggcctaaaccacctcctcctagtttagaaaacatattt
acagagctgaaagaagatattgttggattccagcagccaggtcatggggacctcacagga
tgggctaaacagggtgttctgctgctgaattctgtgttgacagtgagggctcttcaaccc
acctctcatgagggtcaaggttgggagatcttcacagatgctgtggtcttgtggctcagc
aggaacctcagtggccttgtctttctgctttggggctcttatgctcagaggaaaggcaga
gtgatcgacagaaaacgtcatcatgtccttgagacttcacatccatcaccctactcagca
catttaggcttctttggatgtaggcacttttctaaagctaacatgctacttaaagcatca
ggaaagaagccggttgattggacagctctctga
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integrated database retrieval system
