Garra rufa (doctor fish): 141334295
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Entry
141334295 CDS
T11039
Symbol
apba1a
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1 isoform X1
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141334295 (apba1a)
Membrane trafficking [BR:
grf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
141334295 (apba1a)
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
141334295 (apba1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
PRT6_C
Motif
Other DBs
NCBI-GeneID:
141334295
NCBI-ProteinID:
XP_073695440
LinkDB
All DBs
Position
5:complement(21308290..21340836)
Genome browser
AA seq
974 aa
AA seq
DB search
MSHQEAPHGQELREAAEADLERRGPEGQQPPSSHRRRHDNGDGSSRSGRPRNHHSNHGTE
NNHYQPQQQGAPRYRRCEGSNGGTNRTRAARRSTEDGDTEPVQQPIPRPAVTRYRRQGDN
EARIRAQQQRQRQRERQQRDAERAEQQRLEHQQHVISPTQPMPPPREPEEAEEDEGDGGS
ALARSASTESGFHNHTDRAEGDAVMVMEAEPEDESTYGIPLRPESEEYTESAESEQQHGG
PAYLQPQYPPQPPPLPREPLPNAERPHDAETLNPNYSNYVYTQPMYRSPTGAGETREGGA
TEDEPYSEPYAEYTLQEHVYEEITDAPSSKAEGQTPQQRRAEFRLFDRDLYQQQEAVGSR
LHHYDERSDGESDSPEKEAEFAPYPRADSCEQDEDIDQIVAEVKESLSSQSLERVAMGLD
KDGNEEEEWPESESHGQMDENKSTEPMSEREGVEQPPRSPSEESAPVVRSSREKRDAISL
AIKDIKEAIEEVKTRTVRSPYTPDEPKEPIWVMRQDLSPTAESDLQPPLGADSPGSGSTS
PQGAESSTRHLPSHEGSDSTESPSPASKESRRSLASFPTYVEVPGPCDPEDLIDGIIFAA
NYLGSTQLLSDKTPSKNVRMMQAQEAVSRIKTAQKLAKNRKKAPEGEAQPMTEVDLFIST
QRIKVLNADSQETMMDHPLRTISYIADIGNIVVLMARRRMPRSDSQENMEASDPAQDEKR
QYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDLLNTQDMYND
DLIHFSKSENCKDVYIEKQKGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGRLNIG
DQIMSINGTSLVGLPLSTCQSIIKGLKNQSRIKLNIVRCPPVTTVLIRRPDLRYQLGFSV
QNGIICSLMRGGIAERGGVRVGHRIIEINSQSVVATPHEKIVHILSNAVGEIHMKTMPAA
MYRLLTAQEQPVYI
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccaggaggcgccgcatggccaggagttgagagaggcggctgaggcagacctg
gagcgtaggggccccgagggccaacagcctccttcatctcaccgcagacgccacgacaat
ggagacggcagctcccgctccggtcgcccccgcaatcaccacagcaaccacggtacggaa
aataaccactaccagccccaacagcagggggccccacgctaccgcaggtgcgagggatct
aacggcgggacgaaccgcacacgtgctgcaaggagatcaacggaagacggtgacactgaa
cccgttcagcagcccataccgagacctgcagtgacgcgctaccgcagacagggggacaac
gaggcccgaatccgggcacagcaacagagacagcgacagcgggagagacagcagagagac
gcggagagagccgaacagcagaggctggaacatcaacagcatgtcatctctcctacacaa
cccatgccgccccctagagagccggaggaagctgaggaagatgaaggagatggcgggagt
gctttggcccggtccgcgagcaccgaaagcggcttccacaaccacacagaccgggcagag
ggggatgcagtcatggtcatggaagccgagcctgaagacgaaagcacatacggcatcccg
cttcgcccggaatcggaggagtacacagagagcgcagagtcagagcaacagcacggtggt
ccagcttacctccaaccccagtacccacctcagccaccgccgctacctcgagagcccctg
ccaaacgctgagaggcctcacgatgcagagacgctaaaccccaactactccaattatgtt
tacactcaacccatgtaccgcagtcccaccggagcaggagagacccgtgaaggtggagca
acagaagacgagccgtattctgagccctacgctgaatacacccttcaggagcacgtttat
gaggaaatcacggatgcgccctcgagcaaagccgagggacaaactccgcagcagcgtaga
gcagaattcaggctcttcgatcgtgatttgtatcagcagcaggaggctgttggatccagg
ctccaccactacgacgagcgatccgacggagagtcggacagtcccgaaaaggaagcagag
tttgccccgtacccccgtgctgacagctgcgagcaggatgaggacattgaccagatcgtg
gcagaggtgaaagagagtttgagctcacagagcctggagcgtgttgccatgggcctggac
aaggatggcaatgaagaagaagagtggcctgagtcagagtcccacggtcaaatggacgaa
aacaaatccacagagccaatgagtgaaagagagggggtagagcagccccccagaagtccc
tccgaagagtcagctccagttgtgaggagcagtcgtgagaagagagacgcaatctcactg
gctattaaggacattaaagaggcaatagaggaggtgaagacaaggacggtccgctcgccc
tacacgccagacgagcccaaagaacccatctgggtaatgaggcaggacttgagtcctacg
gcagaatctgacctgcagccgcctctgggggctgattctccaggctcaggctccacctcc
ccacaaggggcggagtcttccacccgtcacctgccgtcacatgaggggagcgacagcact
gagtctccatctccagccagtaaagagtcaaggagaagtcttgcttcattcccgacatat
gttgaggtaccaggcccatgtgacccagaggacctcattgatggtattatctttgctgct
aactacctgggatccacccagctgctctcagacaagactccctccaaaaacgtgcgcatg
atgcaggctcaggaggctgtgagtcgcattaagacggcccagaaattagccaaaaacagg
aagaaggctccagaaggtgaagctcagcccatgacagaggtggacctcttcatctccact
cagagaatcaaagtgctcaatgcagactcacaggagaccatgatggaccaccctttaagg
accatctcttacatcgctgatattgggaacatcgtggtgttgatggccagaagaagaatg
cctcgctccgactctcaggagaacatggaagcctctgacccggctcaggacgagaagcgc
caatacaagatgatctgtcacgtatttgagtctgaagatgcgcagctcatagctcagtcc
attggccaggctttcagtgtggcgtaccaagagtttctgcgtgccaatggcatcaaccca
gaggatctgagccagaaagagtacagcgacctccttaacacacaggacatgtacaacgat
gacctcattcacttttccaagtctgagaactgcaaagatgtttacatagagaagcagaag
ggagagatacttggggtggtgattgtagagtcgggctggggctccatcctgccaacagtt
attatagcaaatatgatgcacggcggcccggccgagaagtctggcaggctgaacatcgga
gaccagattatgtccattaatggcaccagcctggtggggttacccctctccacctgtcag
agtattatcaagggattgaagaatcagtccagaataaagctcaacattgtgagatgccca
cctgtgaccactgtcctcatcagaagaccagacctgagatatcagctgggatttagtgta
cagaatggcattatctgcagtctgatgagaggagggatagcggagcgcggtggggtgcgt
gtcggccaccggatcattgaaatcaatagccagagtgttgtggccacccctcatgagaag
attgtacacattctgtcaaatgcagttggtgagattcacatgaagactatgccggctgcc
atgtaccgcttgttaacagcccaggagcaaccagtttacatctaa
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