Garra rufa (doctor fish): 141334317
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Entry
141334317 CDS
T11039
Symbol
zbtb20
Name
(RefSeq) zinc finger and BTB domain-containing protein 20
KO
K10501
zinc finger and BTB domain-containing protein 20
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141334317 (zbtb20)
04121 Ubiquitin system [BR:
grf04121
]
141334317 (zbtb20)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
141334317 (zbtb20)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
141334317 (zbtb20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2HC_2
BTB_KLHL33
Zf-C2H2_ZNF451_2nd
zf-met
zf-C2H2_6
zf-C2H2_15
BolA
zf-C2H2_11
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
141334317
NCBI-ProteinID:
XP_073695466
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All DBs
Position
5:4845971..4852843
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AA seq
662 aa
AA seq
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MTERIHHINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSPFFQDKL
LLGYSDIEIPSVVSVQSVQKLIDFMYSGVLRVSQSEALQILTAASILQIKTVIDECTRIV
SQNVGIAGPGSFSVVPGDSGQETPRGTPESGTSGPSSDAESGYMQTSHQSLERVYSTLYS
SCSGLGLQNGTRGNRSHYAGTAVTASYDSPLPLQPKEGGQDPAWITRIHERSQQMERFLA
TSETTHCRKQPRPVRLHTGDIHIKQEQGDEYNCYGLEDCREDGEQLECVESEPKGESFDS
GVSSSIGTETDSVEQPFLSGFARDNCQNKGQQGERGTPVQIEVNDSSPEQTQESVEDGPR
NGPSQESGELGIHQPPQGNPTAPQSIPGGPYLRPGEPLTSNLRMPLTLTSNSQVMGTAGN
TYLPTLFATQSASDNKPFLFSLPQSIGSQQPQFVAVPSPSMPPFSGGMTVPPGGSQQQGG
TAGGQHGEKKPYACTLCCKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMV
THTGVRAYQCSICNKRFTQKSSLNVHMRLHRGEKSYECYICKKKFSHKTLLERHMALHSN
ETGVSAGAGAGGPASIPVPMAVPEPGAASCQEGTTYMCSVCPVKFDQIEHFNDHMRKHVS
DG
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacgcattcaccacattaatctccacaactttagcaattctgtacttgagacc
ctcaatgagcagcgaaaccgcgggcacttctgtgacgtgactgttcggatccatggtagc
atgctgcgagctcaccgctgtgtgctggctgcaggcagccccttcttccaggacaagctg
ctcctgggctacagtgacatcgagatcccctctgtggtttctgtgcagtccgtccagaaa
ctgattgacttcatgtacagcggcgtgctgcgggtctcccagtccgaggccctgcagatc
ctcacggccgccagcatacttcagatcaagaccgttatcgacgagtgcacccgcattgtt
tcgcagaatgtcggcatcgccggacctggcagcttttccgtggtcccgggcgactcgggg
caggagacgccgcgaggaactcccgagtccggcacgtccggccccagcagcgacgccgag
tcgggctacatgcaaacatctcaccagagccttgagcgcgtttattccacgctttactcc
agctgttctgggttgggcctgcaaaacggcacccgcggaaaccgctcccactacgccggc
actgcggtcacggccagctacgactcgccccttccgctgcagccgaaggagggagggcag
gaccccgcctggatcacgcgcatccacgagcgctcgcagcagatggagcgcttcctggcc
acgtcggagactacgcactgccgcaaacagcctcgtcccgtgaggctacacacaggtgac
attcacatcaagcaggagcaaggggacgagtacaactgctacgggctggaggactgccgc
gaggacggcgaacagctggaatgcgtcgaaagcgagcccaaaggcgagagcttcgactcc
ggcgtcagctcttccatcggcaccgagacggattccgtcgagcagcctttcctgtccggc
ttcgcccgagacaactgtcaaaacaagggccagcaaggcgagcggggcacccccgtgcag
atcgaggtcaacgactcctctcccgagcagacccaggagtcggtcgaagacgggcctcga
aacggtccttctcaagagagcggcgagttgggaatccatcagccgccgcagggcaaccca
acagcgccccagtcgatacctggtgggccgtacctgcggccaggtgagccgctcaccagc
aacctgcgtatgcccctcaccctgaccagcaactcccaggtaatgggaaccgcgggcaac
acttacctgcctacactctttgcaacccagtcagccagcgacaacaagcctttcctcttc
agtctgccccagtccattgggagtcagcagccccaattcgtggcagtgccctctcccagc
atgcctccgttctccggtggaatgacggtgccgccgggcggaagtcaacagcaaggcggt
actgccggggggcagcatggggagaagaagccctacgcgtgcactctttgttgtaagacc
tttactgccaaacaaaactacgtcaaacacatgtttgtgcacacaggtgaaaagccgcac
cagtgcagcatctgctggcgttcgttctcgctgaaggattatctcatcaaacacatggtc
acacacacaggcgtccgggcgtaccagtgcagcatctgcaacaaacgcttcacgcagaag
agctcgctcaacgtccacatgcgcttgcaccgtggagagaagtcctacgagtgctacatc
tgcaagaaaaagttctcccacaagaccctgctggagcgtcacatggccctgcacagcaac
gaaaccggggtcagcgccggggcaggcgccggaggccccgcgtccatcccggttccgatg
gccgtcccagagccgggagcggcaagctgccaggaggggaccacctacatgtgctcagtg
tgccctgtcaagtttgaccaaatcgagcacttcaatgaccacatgcgcaagcatgtctcc
gacggataa
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