Garra rufa (doctor fish): 141334332
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Entry
141334332 CDS
T11039
Symbol
ap2b1
Name
(RefSeq) AP-2 complex subunit beta
KO
K11825
AP-2 complex subunit beta-1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04142
Lysosome biogenesis
grf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141334332 (ap2b1)
04142 Lysosome biogenesis
141334332 (ap2b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141334332 (ap2b1)
Membrane trafficking [BR:
grf04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
141334332 (ap2b1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
Alpha_adaptinC2
HEAT
Arm
PDS5
B2-adapt-app_C
Cnd3
HEAT_MROH2B_C
HEAT_GCN1
NELF-A_N
Arm_2
PIK3R4-like_middle
HEAT_spiro
API5
FANCI_S3
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
141334332
NCBI-ProteinID:
XP_073695490
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All DBs
Position
5:86450..131565
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AA seq
879 aa
AA seq
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MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA
VAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDEREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNTLLKKLSPPLVTLLSGEPEVQY
VALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASHANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRK
YPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEV
VLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIQHGSI
DTGESPVSAGPAATIDQPQVIPSQGDLLGDLLNLDLGPPVNVPQGSSMQIGAVDLLGGGL
DSLLGGDLGGGVGGSPAVGQNFIPSSVPNTFAPSPTPAALSSGLNDLFELSSGMSIATGG
YVAPKTVWLPAVKAKGLEISGTFSRRQGHMYMDMSFTNKALQHMTDFAIQFNKNSFGVIP
TTPLPVHTPLMPSQSIDISLPLNTIGPVMKMDPLNNLQVAVKNNIDVFYFSTLIPLNVFF
VEDGKMERQVFLATWKDIPNENELQYQIKECHLNAGEVI
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgactgactccaagtattttaccaccaacaaaaaaggtgaaatctttgagctaaaggct
gagctgaacaatgagaagaaggagaagaggaaagaggcagtgaagaaagtcattgcagcc
atgacagtgggcaaggatgtcagttccttgtttccagatgtggtaaactgcatgcagacc
gataacctggagctgaagaaactggtttacctgtaccttatgaactatgccaagagtcaa
cctgacatggccatcatggccgttaacagctttgtcaaggactgtgaggatccaaaccct
ctgatccgagctctggctgtgcgtacaatgggttgtatccgtgtggacaagatcactgag
tacttgtgcgagcctctgcgaaagtgtctgaaggatgaagacccctatgtgaggaagacc
gccgcagtgtgtgtggccaaactacatgacatcaatgcccagatggtggaggaccagggc
ttcctggattctctcagggacctgatcgctgactccaaccctatggttgtggcaaatgca
gttgctgctctgtctgagatcagcgagtctcaccccaacagcaaccttctggacctgaat
cctcagaacatcaacaagcttttgacggctctcaatgaatgcactgagtggggccaaatc
ttcatcctggactgtctttccaactacaaccccaaagatgagcgtgaggcccagagtatc
tgtgagcgcgtgaccccacgtctatctcatgctaactcggctgtggtgctgtcagcggtg
aaggtgctgatgaagtttctggagcttctgcccaaagactctgattactacaacactctt
ctgaagaagctctctcctcccctcgtcacgctgttgtctggggaacctgaggttcaatat
gtggccctgaggaacatcaaccttattgtgcagaaacggcctgagattttgaagcaagag
atcaaagtgttctttgtgaagtacaatgaccccatctacgtcaaactggagaaactggat
atcatgatccgcctggcctctcatgccaacattgcccaggtgctggctgaactgaaagaa
tatgccactgaagtggatgtagactttgttcggaaagccgttcgagccatcggccgttgt
gccatcaaagtggagcaatcagctgagcgctgtgttagcaccctgctggacctcatccag
actaaagtcaattacgtcgtgcaagaggccattgtggtcatcagggacatcttccgcaaa
taccctaacaagtatgagagcataattgccactctgtgtgaaaacctggactctctggat
gagccagacgctcgagctgccatgatctggattgtgggcgaatatgcagagcgtatcgac
aatgctgatgagctcctggaaagtttccttgagggcttccatgatgaaagcactcaggtc
cagttgactctgctgacagctatagttaaactgttcctgaagaagccatcagagactcaa
gagctggttcagcaagtgctcagtctggccactcaggactctgataaccctgatctgcgt
gatcgcggctacatctactggcgtctgctgtccactgaccctgtgaccgctaaagaggtt
gtgctgtctgagaagcctttgatttcagaggaaacagacctgatcgagcccaccctgttg
gacgagctcatctgccacatcggctcactggcctccgtctaccacaaaccccccaatgcc
tttgtggaaggaagccacggcattcaccgaaaacatctgcccatccagcacggcagtatc
gacactggggagagtccagtcagtgccggcccggctgctactatcgatcagccccaagtc
attccatctcagggtgaccttttgggagacctgcttaatctggacctcggtccccccgtc
aacgtgccacaggggtcttcaatgcagattggcgcagtggatctcctcggaggtggtctt
gacagtttgctcgggggagatctgggaggaggtgttgggggcagtcctgcagttggtcaa
aactttatcccgtcatcggtgcccaacacatttgcgccgtctcctacacctgctgctctc
agcagtggcctcaatgacttgtttgagttgtcctcaggaatgtccattgctacaggagga
tatgtggcacctaaaactgtatggctgccagcagtgaaggcaaaaggactggagatatct
ggaaccttttctcggcgtcaagggcacatgtacatggacatgagcttcaccaataaagcc
ctgcaacacatgactgattttgccatccagttcaacaagaacagttttggagtgatcccc
accacacctctccctgttcacactccactgatgcccagccagagcatcgacatttccctt
cctctcaacaccatcggccctgtgatgaaaatggacccacttaacaacctacaggtggct
gtgaaaaacaatattgatgtcttctacttcagcacgctgatccctctcaacgtcttcttc
gtggaggatggcaaaatggagcgtcaggtgttcttggccacatggaaggacattccaaat
gagaatgagctgcagtatcagatcaaagaatgccacttaaacgcaggtgaggttatctag
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