Garra rufa (doctor fish): 141334370
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Entry
141334370 CDS
T11039
Symbol
hnrnpul1l
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141334370 (hnrnpul1l)
03400 DNA repair and recombination proteins [BR:
grf03400
]
141334370 (hnrnpul1l)
Spliceosome [BR:
grf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
141334370 (hnrnpul1l)
DNA repair and recombination proteins [BR:
grf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
141334370 (hnrnpul1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_17
AAA_18
SRP54
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
141334370
NCBI-ProteinID:
XP_073695526
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All DBs
Position
5:18061352..18079997
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AA seq
896 aa
AA seq
DB search
MSGLNVKKLKVNELKEELQRRGLDTRGLKADLADRLQAALEAEAAGSAPSDEQEQEFEAG
GETGEGNEEEEFAAGEQDFGEEAKAQFDDGNSTDLYQGGFDDQGADSNEGNEDSTETPIP
GFGTSDYSSDAPGQMTEHYDQDEFQEPEAKKPYTEEPARRQNNQDKVKQEYEETPSHAEP
QGEQKFDEPASRQTPEGDSSQRSQQGDSGSLEVKTEYKADEDVPPQAEQGSDWDAQAKSE
DDRYSSYSRKRSYDESRGYGYYEHREERRGRSPQPPAEEEEEDIDDKLVVIDTYNCDLHF
KVARDRYSGYPLTIEGFAYLWAGARATYGVTKGRVCFEMKINEEISVKHLPSSEPDPHVV
RIGWSLDTCNTQLGEEPYSFGYGGTGKKSASCKFEDYGEKFSENDIIGCYIDFESSEEVE
MGFSKNGKSLGPCFHVSREELAGRALYPHVLVKNCAVEFNFGQREEPFFPQPEGFTFIQD
IHLEERVRGTLGPTNKSECEILMMVGLPGSGKTTWAIKHAKENPEKKYNILGTNAIMDKM
KVMGLRRQRNYAGRWDILIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFE
GFQRKAIVICPTDEDLKERTLKRTDEEGKDVPDHAVLEMKANFVLPEVGEFLDDVAFVEL
QREEADALIKQYNEEGRKAGPPPEKRFDNRQGGFRGRSNFQRYDNRGGPQGGRGGYQNRG
GSGGGGYRGGYNRGGYNQNRWGNNYRDGGSGGRGGYSRNQQSGGSYNHNRQGSYNKSGSG
SSGGYSQSQPQTYSQGYNQGYSQSNYNPGYNYGNYSQYPGYSQSYSQTPAPTGQTYNQQQ
QQQQQSYNQQYQQYAQQWQQYYQNQSQWNQYYNQYGNYGNYNQQGTQGSQGAQGTQ
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcttaatgtcaaaaagctcaaagtcaatgagctaaaagaagagctccagcgg
cgaggcctggacactcgcgggctcaaggcggatctggcggacagattgcaggcggcactg
gaggccgaggcggctgggtctgcgccatcggacgagcaggaacaagaatttgaggctggc
ggggaaacgggagagggcaatgaggaggaagaatttgcagccggagagcaagattttgga
gaagaggccaaggcacagtttgatgatggaaacagcacagacctctaccagggtggattt
gatgatcagggagctgatagtaacgaaggcaacgaggacagcactgagacccccatacct
ggttttggaacaagtgattattcatcagacgcgccagggcagatgacagagcactatgac
caggatgaattccaggagcctgaggccaagaagccatacactgaggagccagccaggcgg
cagaataatcaggataaggtgaagcaggagtatgaggagactccttcacatgcagagcca
cagggggaacagaagtttgacgagccagcgtcaaggcagaccccagaaggagactcaagt
cagcgcagccagcagggagactctgggagccttgaggtgaagactgagtataaggccgat
gaggatgttccaccgcaggctgagcagggcagtgactgggatgcacaggccaaatcagag
gatgatagatactcatcatacagtcgcaagaggtcatatgatgagagtcgaggatacggt
tactatgaacatcgtgaggaaaggaggggtaggtcaccacagcccccagctgaagaagag
gaggaagacattgatgataagcttgtggtcattgacacctataactgtgacctgcacttc
aaggtggctcgtgacagatacagtggttatcctctaaccattgagggttttgcctacctg
tgggcaggtgctcgagccacttatggtgttaccaaaggacgtgtgtgctttgaaatgaag
ataaatgaggaaatttcagtcaagcaccttccttcctctgagcctgaccctcatgtggtg
agaatcggatggtccctggatacatgcaacactcaacttggtgaagaaccctactctttc
ggctatggaggaactggcaagaaatccgccagctgtaaatttgaggactatggggaaaag
ttcagtgaaaacgatatcatcggctgctatattgactttgaaagcagtgaggaagtagaa
atgggattctccaagaatggcaagtcactgggcccatgtttccatgtctctcgagaggaa
ttggccgggcgtgctctttacccacatgtgttggtgaagaactgtgcagtggaattcaac
ttcggacagagagaggagccctttttccctcagccggaaggctttaccttcattcaggat
attcacctggaggagagagtcagagggacactgggacccaccaataaatctgaatgcgag
atcctgatgatggttggtctgcctggtagtggaaaaaccacatgggccataaaacatgct
aaagagaaccctgaaaagaagtacaacatcctgggaacaaatgctatcatggataagatg
aaggtcatgggacttcgccgccagcgcaactatgccggacgctgggacatccttattcag
caggccacgcagtgtctcaacagactcatccagattgctgcccgcaagaagcgcaactac
atcctggatcagacaaatgtttatggatcagcccagagacgaaaaatgcgtccttttgaa
ggttttcaacgcaaggctattgtaatttgtcccacggatgaggatttaaaagagcgaacg
ttaaagcgaactgatgaggaagggaaggatgttcccgatcatgctgtgttagaaatgaaa
gcaaactttgtgctgcccgaagtcggcgagttcctggacgatgtggctttcgtagagctt
cagcgggaagaagccgacgctctcatcaagcagtacaacgaagaaggccgcaaagccggc
cctcccccagagaagcgtttcgataaccgccagggtggtttccgcggccgtagtaacttc
cagcgctatgacaatcgcggtggacctcagggcggtagaggcggctaccagaaccggggt
ggctccggaggtggaggctaccgaggaggatacaaccgtggaggctacaaccagaatcgc
tggggaaataactacagggatggaggctcaggaggccgtggtggatacagccgcaaccag
cagtctggaggcagttacaaccacaaccgccagggctcctacaacaagagtggctctgga
tcgtctggaggctacagccaatcacagcctcagacttacagtcaaggctacaaccagggc
tacagccagagcaactacaacccagggtacaactatggcaactacagtcaatacccagga
tacagccagagctacagtcaaactccagcgcccacgggacagacctacaaccagcagcag
cagcagcagcagcagagctacaatcaacagtaccagcagtatgctcagcagtggcagcag
tactaccagaaccagagccagtggaaccagtactataaccaatacggcaattacggcaac
tacaaccagcaaggcactcaaggcagccagggcgcccagggaacacagtag
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