KEGG   Garra rufa (doctor fish): 141334370
Entry
141334370         CDS       T11039                                 
Symbol
hnrnpul1l
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
grf  Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:grf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:grf03041]
    141334370 (hnrnpul1l)
   03400 DNA repair and recombination proteins [BR:grf03400]
    141334370 (hnrnpul1l)
Spliceosome [BR:grf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    141334370 (hnrnpul1l)
DNA repair and recombination proteins [BR:grf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     141334370 (hnrnpul1l)
SSDB
Motif
Pfam: AAA_33 SPRY SAP AAA_17 AAA_18 SRP54 Zeta_toxin
Other DBs
NCBI-GeneID: 141334370
NCBI-ProteinID: XP_073695526
LinkDB
Position
5:18061352..18079997
AA seq 896 aa
MSGLNVKKLKVNELKEELQRRGLDTRGLKADLADRLQAALEAEAAGSAPSDEQEQEFEAG
GETGEGNEEEEFAAGEQDFGEEAKAQFDDGNSTDLYQGGFDDQGADSNEGNEDSTETPIP
GFGTSDYSSDAPGQMTEHYDQDEFQEPEAKKPYTEEPARRQNNQDKVKQEYEETPSHAEP
QGEQKFDEPASRQTPEGDSSQRSQQGDSGSLEVKTEYKADEDVPPQAEQGSDWDAQAKSE
DDRYSSYSRKRSYDESRGYGYYEHREERRGRSPQPPAEEEEEDIDDKLVVIDTYNCDLHF
KVARDRYSGYPLTIEGFAYLWAGARATYGVTKGRVCFEMKINEEISVKHLPSSEPDPHVV
RIGWSLDTCNTQLGEEPYSFGYGGTGKKSASCKFEDYGEKFSENDIIGCYIDFESSEEVE
MGFSKNGKSLGPCFHVSREELAGRALYPHVLVKNCAVEFNFGQREEPFFPQPEGFTFIQD
IHLEERVRGTLGPTNKSECEILMMVGLPGSGKTTWAIKHAKENPEKKYNILGTNAIMDKM
KVMGLRRQRNYAGRWDILIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFE
GFQRKAIVICPTDEDLKERTLKRTDEEGKDVPDHAVLEMKANFVLPEVGEFLDDVAFVEL
QREEADALIKQYNEEGRKAGPPPEKRFDNRQGGFRGRSNFQRYDNRGGPQGGRGGYQNRG
GSGGGGYRGGYNRGGYNQNRWGNNYRDGGSGGRGGYSRNQQSGGSYNHNRQGSYNKSGSG
SSGGYSQSQPQTYSQGYNQGYSQSNYNPGYNYGNYSQYPGYSQSYSQTPAPTGQTYNQQQ
QQQQQSYNQQYQQYAQQWQQYYQNQSQWNQYYNQYGNYGNYNQQGTQGSQGAQGTQ
NT seq 2691 nt   +upstreamnt  +downstreamnt
atgagcgggcttaatgtcaaaaagctcaaagtcaatgagctaaaagaagagctccagcgg
cgaggcctggacactcgcgggctcaaggcggatctggcggacagattgcaggcggcactg
gaggccgaggcggctgggtctgcgccatcggacgagcaggaacaagaatttgaggctggc
ggggaaacgggagagggcaatgaggaggaagaatttgcagccggagagcaagattttgga
gaagaggccaaggcacagtttgatgatggaaacagcacagacctctaccagggtggattt
gatgatcagggagctgatagtaacgaaggcaacgaggacagcactgagacccccatacct
ggttttggaacaagtgattattcatcagacgcgccagggcagatgacagagcactatgac
caggatgaattccaggagcctgaggccaagaagccatacactgaggagccagccaggcgg
cagaataatcaggataaggtgaagcaggagtatgaggagactccttcacatgcagagcca
cagggggaacagaagtttgacgagccagcgtcaaggcagaccccagaaggagactcaagt
cagcgcagccagcagggagactctgggagccttgaggtgaagactgagtataaggccgat
gaggatgttccaccgcaggctgagcagggcagtgactgggatgcacaggccaaatcagag
gatgatagatactcatcatacagtcgcaagaggtcatatgatgagagtcgaggatacggt
tactatgaacatcgtgaggaaaggaggggtaggtcaccacagcccccagctgaagaagag
gaggaagacattgatgataagcttgtggtcattgacacctataactgtgacctgcacttc
aaggtggctcgtgacagatacagtggttatcctctaaccattgagggttttgcctacctg
tgggcaggtgctcgagccacttatggtgttaccaaaggacgtgtgtgctttgaaatgaag
ataaatgaggaaatttcagtcaagcaccttccttcctctgagcctgaccctcatgtggtg
agaatcggatggtccctggatacatgcaacactcaacttggtgaagaaccctactctttc
ggctatggaggaactggcaagaaatccgccagctgtaaatttgaggactatggggaaaag
ttcagtgaaaacgatatcatcggctgctatattgactttgaaagcagtgaggaagtagaa
atgggattctccaagaatggcaagtcactgggcccatgtttccatgtctctcgagaggaa
ttggccgggcgtgctctttacccacatgtgttggtgaagaactgtgcagtggaattcaac
ttcggacagagagaggagccctttttccctcagccggaaggctttaccttcattcaggat
attcacctggaggagagagtcagagggacactgggacccaccaataaatctgaatgcgag
atcctgatgatggttggtctgcctggtagtggaaaaaccacatgggccataaaacatgct
aaagagaaccctgaaaagaagtacaacatcctgggaacaaatgctatcatggataagatg
aaggtcatgggacttcgccgccagcgcaactatgccggacgctgggacatccttattcag
caggccacgcagtgtctcaacagactcatccagattgctgcccgcaagaagcgcaactac
atcctggatcagacaaatgtttatggatcagcccagagacgaaaaatgcgtccttttgaa
ggttttcaacgcaaggctattgtaatttgtcccacggatgaggatttaaaagagcgaacg
ttaaagcgaactgatgaggaagggaaggatgttcccgatcatgctgtgttagaaatgaaa
gcaaactttgtgctgcccgaagtcggcgagttcctggacgatgtggctttcgtagagctt
cagcgggaagaagccgacgctctcatcaagcagtacaacgaagaaggccgcaaagccggc
cctcccccagagaagcgtttcgataaccgccagggtggtttccgcggccgtagtaacttc
cagcgctatgacaatcgcggtggacctcagggcggtagaggcggctaccagaaccggggt
ggctccggaggtggaggctaccgaggaggatacaaccgtggaggctacaaccagaatcgc
tggggaaataactacagggatggaggctcaggaggccgtggtggatacagccgcaaccag
cagtctggaggcagttacaaccacaaccgccagggctcctacaacaagagtggctctgga
tcgtctggaggctacagccaatcacagcctcagacttacagtcaaggctacaaccagggc
tacagccagagcaactacaacccagggtacaactatggcaactacagtcaatacccagga
tacagccagagctacagtcaaactccagcgcccacgggacagacctacaaccagcagcag
cagcagcagcagcagagctacaatcaacagtaccagcagtatgctcagcagtggcagcag
tactaccagaaccagagccagtggaaccagtactataaccaatacggcaattacggcaac
tacaaccagcaaggcactcaaggcagccagggcgcccagggaacacagtag

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