Garra rufa (doctor fish): 141334434
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Entry
141334434 CDS
T11039
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
141334434 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
grf01009
]
141334434 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141334434 (ncor1)
Protein phosphatases and associated proteins [BR:
grf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141334434 (ncor1)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
141334434 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
NCOR1_N
Myb_DNA-bind_6
DUF7952
LOB
Motif
Other DBs
NCBI-GeneID:
141334434
NCBI-ProteinID:
XP_073695598
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All DBs
Position
5:complement(12268925..12364863)
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AA seq
2431 aa
AA seq
DB search
MSSSGFPPSQGSFSSEQSRYPPHSVHYTFSSTRHPSEFSVPDYRSPLQDQQRRRPSLLSE
FHPGTERPPERRHGYEQQFHAAQAQQEQEALDAKRPRIENVSEGHFSRGQPTGILLPPPQ
TIQDSIRTTGEVKKETQFSVKVEASSPGGVPHVGEDADTSPSKLSKEELIQSMDRVDREI
AKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKAEEAHK
ILEGLGPKVELPLYNQPSDTKVYHDNIKTNQMMRKKLILFFKRRNHARKQREQKICQRYD
ELMTEWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGTGLSAT
IARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDPMKVYK
SRQFMNVWTEHEKEIFKEKFVQHPKNFGLIASFLERKCVSDCVLYYYLTKKSQNYKTLVR
RNFGNRRRRNQQITRPSQEDKTDEKNEEDKSEKSEKKEDEEKKEEEEKDEKEDSKDISKD
KEKCEGEEEEGKEQSTPRGRKTANSQGRRKGRITTRSMANNEAASVVAEEPPPPPPEPVL
PEPTPPSKPEPVQKPAREPAKPSAAASVETRGAVEAGETSRWTEEEMEIAKKGLVEHGRN
WSAIAKMVGSKSEAQCKNFYFNNKRRYNLDNLLRQHKGSRRLRGNRDPSQSDAAPDDDEE
SDGPDNSSDTESAPSPSQSDPSKSDSLTHPNDGTSDQDLAATKVPVADAKCQEPLYSELR
VKVEKSPEGGAGDGLPQDERTRSAYEMQIHPKSEPQDVEMTAPSNERAQVQVKMEPEIKD
KEEKQGEQHHSDNDSSATCSADEDVEAEPDRQRLFSLEKPSLLGTAGSVVVSSAKLLNVQ
QLQQRAATIPPMVSPHSLYPHLAFRYAPLDRDRAQPPRHVSAPFGHSGVPGGPLSGFAMF
QHQIKAVHESVQEDKQRLDQNESDRRQRVTTHSPTIVDREGKPFTYMPYDLKLMEQEAHG
GVGRPGSPYRLSPREHNKASPQPDASNATRYSVPPVLQPAPNQVVQNLSDVRMFSRHRPP
NIPSPPPLIPTSKPTDKPSFIQGGSISQGTPGTYLPSQTHAVYVPEVVKTTGGSISLGLP
RQQDPAKPVSYIKQEECSPRGQSAQAEGLLSRAQYEGVVRGPMQVQDMRGPPGKGPEGMT
FRGGSITQGTPALSQSNVAADLLKGTIAKLATEDLSGPDKSRAEAHSKAHVIYEGKSGHI
LSFDAIKNPREGTRSPRMGHDLKRTYDIMEGSRGHPPREAAPYEGLISRALPSPHDSKDR
AILAGSIMQGTPRASAEVYDEASKYGKQIKRESPPIRSFEGGITKGKPYEGVNTIKEMGR
SIHEIPRKETQDSRKTPVLEGSITQGIPLKYESSTVNPSTIKHNVKSLITSPVKISHSAI
EAAKYEDAKASERVRHTSVVNSTSVLRSTHTEAGKSQLSPGMYEDSNARRTPTYSGTSIS
RGSPLLRGQDGSMTTGKPASHERKSTLTPTQRDSVPAKSPVSGGEPLGSHSPFDPHHRPV
VPGEVYRTHLPPHLDPSLAFHHRVLDPAAYMFPRQPSPTGYPNTYQLYTMENTRQTILND
YITSQQMQVIPRPDVTRGLSPREPSIAIPYPPARGIIDLAQMPPTILLPHPGGTGSPSLD
RITYIPGPQTPFPPRAFNPASISPGHPAHHSATAAIVERERENQREKERERERERERERE
RDQRERERAAVEYMRGGSEQPGRPGSRSYLRSTSPSVRSQEGVLQQRPSIFQGTNSKSVI
TPLMQMPSQASAAQASRYSNAADALAALVDAAASAPQMDVAKVKEVKHNNSSSRDDDVMS
SRRAAQESQEVERRSVQSPYGDVSLPSGKPSHPVYAEGGGAAGSKDKPPPTKSRMEEELR
THGKTTITAANFIDVIITRQIAPDKDSRERGSQSSDSSSSMSSSRFEAQGGIEVISPANS
PALREEKNEGPFQSEKSSGLRFDINRFRQSGDSGPSAPQQPPSSQADSYGPVPKTHRIMT
LADHISHIITQDFAKSQDPPPSSSSLPSSSSSSSLSSTFQSSGVGGVVGRVKPPNRYSPE
NPASTAHHQRPPSRVSPENSSDKPRARPGRSPDRGRGPENYEPISPPQGYSGLDKQEASV
LQSQRREQDLPEQRTDSRSPGSSSYLPSFFTKLESTSPMVMSKKQEIFRKAEVGNAQPGT
EIFNLPAVTTSSSVNPRNHSFSDPASNLGLEDIIRKALMGNMEEKQEDQQQQQAQLGTGN
NSGSMSSISDSRQEASPSPNTGSYSGKQKLQSKASSRKSKSPNPGQAYSAGERPSSVSSV
HSEGDYHRQAPTWAWEDRPSSTGSMQFPYNPLTMRMLSSTPPTSMACPSPSMQSQQQAQG
GASGPVAPTRAWEREPPLLSEQYETLSDSDD
NT seq
7296 nt
NT seq
+upstream
nt +downstream
nt
atgtctagttcaggctttccccccagccaggggtccttcagcagcgaacagagccgttac
ccacctcactcagtgcattacaccttcagctccacacgccacccttcggagttctcggta
cccgactaccgttctccactgcaggaccagcagcgccgcaggccttcattactatccgaa
tttcaccctgggaccgagaggccgccggagcgcagacatggttacgagcaacagtttcat
gccgcccaggctcagcaggagcaggaggctctcgatgccaagcgtccccgaatcgagaac
gtatctgaagggcacttttcaagaggtcagcccaccggcatcctactgccccctccacag
accatacaggacagcatcaggaccactggagaggttaagaaggaaacccagtttagtgtg
aaggtggaggcctcgtccccaggtggagttccacatgtgggtgaggatgcagacacatcg
ccctccaaactctccaaggaggagttgattcagagcatggaccgcgttgaccgtgagatt
gccaaggtcgagcagcagattttcaaactgaaaaagaaacagcaacaactggaggaggag
gcagcaaagccggtagagccagaaaagccagtgacgccgccccctgtggaacacaaacat
cgcagcatcgtccagatcatttatgatgagaacaggaaaaaagcagaagaagcccataaa
atactggaggggttggggcctaaagtggagctgcctctgtacaaccagccctctgatact
aaagtctaccatgacaacattaagacgaatcagatgatgaggaagaagctgattctgttt
ttcaagaggaggaatcatgcacgcaaacagagggagcaaaaaatttgccagcggtatgat
gagctgatgacagagtgggagaaaaaagttgagcggatggaaaacaacccacggcgtaaa
gccaaggagagccgtacacgtgaatactacgagaggcagtttcctgagatccgcaaacag
cgtgagcaacaggaacgtttccagagggtgggccagagggggacaggcctgtctgccacc
atcgcaagaagtgaacacgagatatctgagatcattgacggcctctcggagcaggagaac
aatgagaaacagatgaggcagttgtccgtcattcctcccatgatgtacgattctgaacag
cggagagtgaagttcatcaatatgaacggtctgatggatgacccaatgaaggtctacaaa
tcccgccagttcatgaatgtctggaccgaacacgagaaggagatcttcaaggaaaagttt
gtgcagcatccaaaaaactttgggctgatcgcttcatttctggagagaaagtgtgtgtct
gattgtgtgctgtactattatctgactaagaagagtcagaactataaaactcttgtcaga
agaaattttggaaatcgacgacgaaggaatcagcagataacgcgaccttcacaggaagac
aagacagacgaaaagaacgaagaggacaaatcggagaaatcagagaagaaagaggacgag
gagaagaaggaagaggaggagaaagatgaaaaggaggactctaaggacatcagtaaagat
aaagagaagtgtgagggagaggaggaggagggtaaggagcagagcacgccacgcggccga
aagaccgccaacagccagggccgtcgtaagggccgcatcaccactcgctctatggccaat
aatgaggctgcatctgtggtggctgaggaaccacctccacccccacctgagccagttctc
ccagagcccacacccccctctaaacctgagccagtgcagaaaccagcacgagagcctgcg
aaaccctctgctgcagccagcgttgaaacacgaggcgcagttgaagctggagagacgtct
cgctggacggaggaggagatggagatcgccaaaaaaggactggttgaacatggtaggaac
tggtcagccattgccaagatggtaggctctaagagtgaagctcaatgtaagaacttttac
ttcaacaacaagagacgatacaacctagacaatctactgcgccaacacaagggttcccgg
cggctccgtggaaatcgagatccatcacagagcgatgctgcgccggatgacgatgaggag
agtgatggtcccgataacagttcggacacagagagtgcgccttctccatctcaatcagat
ccctccaaatcggactcgctaactcatccaaacgacggcacgtcggaccaggacttggcg
gcaaccaaagtcccagtggcagatgccaagtgccaggagcctctgtacagcgagctacgg
gtgaaagtagagaagagtccagaaggaggagctggagacgggcttcctcaggatgagcgc
acgcgctcagcatatgaaatgcagatccatccaaaaagtgagccgcaggatgtggagatg
accgctccgagcaacgaaagagcgcaggtgcaagtgaagatggagccggagatcaaggac
aaggaggagaaacagggggagcagcaccactccgataatgactctagcgccacctgcagt
gcggatgaggatgtggaggctgaacctgaccgacaaagacttttctctctggagaagccg
tcattgcttggcactgcaggctcagtggttgtgtcctcagccaaactcctcaacgtgcaa
cagctacagcagcgggccgccaccatcccccctatggtcagtccccatagcctctacccc
cacttagcattcagatatgcccctctggacagagacagggcccagccaccccgccacgtt
tcagcgccattcggtcacagtggtgttcctggaggaccgctgagtggctttgctatgttc
cagcaccaaatcaaagctgtacatgagtctgtgcaagaggacaaacagagactggaccag
aacgagtctgaccgcaggcagcgagtcaccacccacagccccactatagtggaccgagaa
ggtaagccgttcacgtacatgccgtatgacctgaagctgatggagcaggaggctcatggt
ggagtgggcagaccaggctctccgtacagactgtctcctcgcgagcataacaaagcctca
ccccagcctgacgccagtaatgccacccgctacagtgtacctccagttcttcagccggca
ccaaaccaggtggttcagaatctttcagacgttcgcatgttttcccgtcacaggccgccc
aacattccgtctcctccacctctcattcccacctccaaacccaccgacaagccctccttc
attcaggggggctccatttcacagggtacgccaggaacataccttccttctcaaacgcac
gctgtgtacgtaccggaggtcgtcaagaccacaggagggtccatctcactcggcttgcca
agacagcaggaccctgccaaacctgtgtcatatattaagcaggaggagtgttctccacgt
ggacagagcgctcaggcggaggggctcttgtccagagctcagtatgagggagtggtcaga
ggacccatgcaggttcaggacatgagagggccacctggaaaaggcccagagggcatgact
ttcagaggaggctccattacgcagggaactcctgccctgtctcagtccaatgtagcagcg
gatctgttgaaaggcactattgcaaaactggccacagaggacctgagcggcccagacaag
agccgagctgaagcacattctaaggctcacgttatctatgaaggcaaaagcggacacatc
ctctcttttgatgccattaagaacccgagagagggcacaagaagtccacgaatggggcat
gatctcaagcgcacatatgacatcatggaggggtcccgtggacacccaccacgtgaggcg
gcaccttatgaaggtttgatcagcagagcattgccgagtcctcatgattctaaggatcga
gccattctcgcaggatccatcatgcaaggaactccaagagcctctgctgaagtctatgat
gaggcctccaagtacggtaaacagatcaagagggaaagtccaccgatacgctcttttgag
ggaggcatcacaaaaggcaaaccatacgagggagtgaacaccataaaggagatgggccgc
tcaattcacgaaattccccgtaaggagactcaagatagccgtaaaactcctgttctggaa
ggatccattactcagggtattcctctgaagtacgagagcagtactgtgaacccgtcaacc
atcaagcacaatgttaaatctctcattacaagccctgtgaagatctcacactcagccatt
gaggcggccaagtacgaagatgcaaaggcgtccgaacgtgtccggcacacctctgttgta
aactccacatctgtcctgcgctccacacacacagaggcaggaaaatcgcagctcagtccg
ggcatgtatgaggacagcaatgcacgcagaacccctacatacagcggcacctccatatcc
agaggatcacctctgctacgagggcaagacggaagtatgacaacaggtaaaccagcttct
catgagaggaagagcacactgactccaacccagagagacagtgttcccgctaagtcccct
gtgtctgggggtgaaccgcttggttctcacagcccgtttgacccccaccatagacctgtg
gtacctggagaggtgtaccgcactcacctaccaccacacctggaccccagcctcgctttt
caccacagagtcctggacccagcagcgtacatgttcccacggcaaccgtcgccgaccggt
taccccaacacttaccagctgtacaccatggaaaacactcggcaaaccattctgaacgat
tacatcacctcgcagcagatgcaggtcataccgcggcctgatgtcacgaggggactgtca
ccacgtgaaccgtccattgccatcccatacccaccagctagaggaataattgatctagcc
cagatgccacctaccatcctgttacctcaccctgggggcacaggttccccctccctggac
cgcatcacctacatccctggacctcagacccctttccctcctagggcattcaaccctgcc
tccatatctccaggacatcctgcccatcacagtgccactgcagctattgtggagagggaa
cgagagaatcagagagagaaggaacgcgagagggagagggaaagagaacgggagcgagaa
agagatcagagagaacgggaacgtgcagcggtggaatatatgcgtggaggctctgagcaa
cctggccgaccaggcagccgaagttatctgcgttccacttcaccctctgtgagatcacaa
gagggcgtcctccagcagcggccgagcatcttccagggcaccaactccaagagcgtcata
acaccactcatgcaaatgccctcacaggcatctgcagctcaagccagccgatacagcaat
gcagctgatgctctcgctgccttggtggacgctgctgcttctgccccgcagatggatgtt
gctaaggtcaaggaggtcaagcataataacagtagctcccgggatgatgacgtgatgtca
tcacgacgggcagcacaggagtcacaagaggtggagcgtcgttccgtgcagtcaccctac
ggggacgtgtcacttcctagtgggaaaccttcccatcctgtgtatgctgagggtggagga
gccgcagggagcaaagacaagcccccacccaccaagtcacgcatggaggaggagctgcgc
acacatgggaagaccaccataactgctgcaaactttattgatgtcatcatcacgcgccag
attgccccagataaggactcccgcgagagaggctcacaaagctctgactcctccagcagc
atgtcatctagtcgttttgaagctcaaggtggaattgaggtgatcagcccggccaactct
ccagccctgagagaagagaagaacgaaggacctttccaatcagaaaagagctcaggatta
aggtttgacattaaccggttcaggcagtcaggagattcaggaccttctgcacctcaacag
cccccctcctcacaagcagacagttatgggcccgtcccgaaaacgcaccgcatcatgacc
ctcgctgaccacatttcgcatatcattacacaggactttgccaagagccaagatcctccc
ccatcatccagctcgctgccttcctcatcatcctcctcctcactctcctccacattccag
agctctggtgtgggaggtgttgtaggtcgagtcaaaccccctaaccgctatagcccagaa
aacccagcttctactgcacaccaccagagaccaccaagcagagtatctcctgagaactcc
tccgataaaccaagagccaggccaggtagatctcctgatcgaggacgaggcccggagaac
tatgagcccatctctcctcctcagggttattctgggttggataaacaggaggccagtgtg
ctgcagagtcagagacgtgagcaggatctccccgaacagaggactgactcacgctcccca
ggcagcagcagttacctgccctcattcttcaccaaactggagagcacgtctcctatggtt
atgtccaaaaagcaggagatcttccgcaaagcagaagtcggtaacgctcagccaggcaca
gagatcttcaatctcccagcagtaacaacgtcaagcagtgtaaaccctagaaaccactca
tttagtgatccagccagcaatctgggtctggaggacatcatcaggaaggctctgatggga
aacatggaggagaagcaggaggaccagcaacagcagcaagcccagctggggacaggaaac
aactcgggcagcatgagcagtatttcagacagccgacaggaagccagcccatcccctaac
acaggttcatactcaggaaagcagaagcttcagagtaaagctagcagcaggaaatcaaag
tctcctaacccaggccaggcatactctgctggagagcgtccctcttctgtatcctctgtt
cattcagagggcgattaccacagacaggctcccacctgggcttgggaggaccggccgtcg
tccacaggttccatgcagtttccttataaccccttgacgatgcgcatgctcagtagtacc
cctcccacctccatggcctgcccttctccttccatgcagtcccagcagcaggcacagggt
ggcgcctctggccccgtagccccgacgcgcgcatgggaaagagagccgccgctactgtca
gagcagtacgagaccctctcggacagcgacgactga
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integrated database retrieval system
