Garra rufa (doctor fish): 141334472
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Entry
141334472 CDS
T11039
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141334472 (zfr)
Spliceosome [BR:
grf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
141334472 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
141334472
NCBI-ProteinID:
XP_073695661
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All DBs
Position
5:complement(11739425..11760894)
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AA seq
1071 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDVKMATGNYFGFTHGAAAQYSQQPTAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAATVAVARPAPVAVAAAATAGAYGGYQPTHAATDYGYAQRQPE
VPPPPPPVTSQNYQDSYSYVRSTAPAVAYDSKQYYQQPVATPAVAAAAAAQPQPTVAESY
YQTAPKTGYSQGATPYTQTQQTRQVTAIKPATPRPATSTFSIYPVSSAVQPVAAAAAASV
VPSYSQSPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAVAAAATAAWTGS
TFTKKTPLQNKTLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKLSQ
SSSSSSGGGSSTRGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPST
EPSVVSQSSTSSTAAPNKTASSNINSSTSTSSNLSASASYLKSGSMAGSAGQGKSPVLNS
VSGNSTSVKKVNTPKINFVGGNKLQTTASKNDESKTEAAKTAQSAASAPASDLKNDMSDP
LSPQSALAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHR
LQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDMY
WRRMEEEQHHWDERRRMPDGGYPQGPPGPPGLLGVRPGMPIPQPQGPVPPRRPDSSDDRY
VMTKHAAIYPSEDELQAIQKIVSITERALKLVSDIITDQDADAKGKEEDKEKKEPPKDRV
LKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTKNLMTRIVEHLPKQLTIVTPEKYEVKG
SVQEAAIILTSSAEPKMQVTITLTSPVIREENTRDGDVTSSMVKDPADVLDRQKCLDALA
ALRHAKWFQARANGLQSCVIVIRILRDLCQRVPTWSAFPSWAMELLVEKAISSAAGPMSP
GDALRRVFECISSGILLSGAPGLIDPCEKNPTDTLATMEEQQREDITSSAQFALRLLAFR
QIHKVLGMDPLPQMNSRFNVRNNRKRRRDNSDGADGFEAEGKKDKKDYEGF
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccagtagtttccttcacctatgtgcccagccggctcggtgaagat
gtcaaaatggccaccggcaactactttggatttacccacggtgctgcggcccagtacagt
cagcagcccaccgctggggtggcatacacccaccccactactgtggccagctatactgtg
catcaagcacctgtggcggcacacacggtggcagcagcctacgcccctacagccgccacg
gttgctgttgccaggcctgcaccagtcgctgtagcagcagcagctactgctggcgcttat
ggaggataccagcccacccacgctgccacggattacgggtatgcacagagacagccggag
gtacccccaccaccacctccagttacctcacaaaactaccaggactcctattcatatgtg
cggtccacagctccagctgtagcgtatgacagtaaacaatactaccagcaacctgtggct
acaccggctgtggcagctgctgcagcggcccagccacaacccactgtggccgaatcctac
tatcagacagcacctaaaactggatacagccagggcgccactccatacacccagacccag
caaacgcgtcaggttacagccataaagccagccacccctagacctgccacctcaaccttc
tccatttacccagtgtcctctgctgtacagccagttgcagccgcggcggctgcctctgta
gtcccgtcatactctcagagtcccacctacagcaccaatgcagtcacatactctggaaca
tcatactctggctatgaagctgcagtgtattcggctgcctcctcctactatcagcagcag
caacagcagcagaaacaagcggccgtcgccgcagcagccactgccgcatggactggcagc
acttttacaaagaaaacccccttgcagaacaaaacactcaaacctaaacagccccctaaa
ccaccacagatacactactgcgatgtctgcaagatcagctgtgctgggccccagacctat
aaggagcatctggagggtcagaagcacaaaaagaaggaagccgcactgaaactgtcacag
agcagcagtagcagcagtggaggcgggagctccacccgcggcacacagaatcagctccgc
tgtgagctctgtgacgtctcctgtactggagctgatgcctacgccgcgcacatcagagga
gccaaacaccagaaggttgtgaaattgcataccaaattagggaagccgataccttccaca
gagcccagtgttgtttcccaatcatccacctccagtacagctgctcctaataaaactgcc
agctccaacatcaatagctccacaagcacatcgtccaacctctctgcttctgcctcttac
ttaaaatctggcagtatggcaggttctgctggacagggcaagagcccggtacttaacagt
gtctcgggcaacagcacctctgtcaagaaggtcaacacacccaagatcaactttgttggt
ggaaacaagttacagaccaccgcttctaaaaatgatgagtccaagactgaggcagctaaa
accgcacagtctgctgcatctgcaccagcatcagacctaaagaatgacatgtctgatcct
ctgtcacctcaatctgcacttgcagccctgcaaagtgatgttcagcctgtcggacatgac
tatgttgaagaggtaaggaatgatgaaggaaaggttatccggttccactgcaagctgtgt
gaatgcagtttcaatgacccgaatgccaaagaaatgcatttgaaaggcaggcgacatcga
ctgcagtacaagaaaaaggtgaacccagatctccaggtggaagtgaaacctagcatccga
gccaggaagatccaagaggaaaagatgaggaagcagatgcagaaggaagagtattggaga
agacgcgaagaggaggagcgctggaggatggagatgaggcgctatgaagaggacatgtat
tggcgacgcatggaggaagagcagcaccactgggatgaaaggcgcagaatgcctgatggc
ggttatccacagggtccacctggacctcctggtcttcttggagtgaggcctgggatgccc
attcctcaaccacaaggaccagtgcctccacgtcgccctgattcctcagatgatcgttat
gtgatgaccaaacatgcagctatttacccttctgaggatgagctccaggccatccagaag
atcgtatcaatcactgagcgagcacttaagctcgtctctgacatcatcacagaccaagat
gcagatgcaaagggcaaagaggaggacaaagaaaagaaagagcctcccaaagacagagtg
ctgaagggagtgatgcgggtaggagttctcgccaaagggctgcttctgcgaggagacaaa
aatgtcaacctggtcctcctttgctctgagaagccgaccaagaatctgatgacgcgcatt
gtggaacatctccctaaacagcttacgattgtaactccggagaaatatgaggtaaaaggc
tctgtccaagaggctgccattattcttacctcctctgctgagcccaagatgcaggtgacc
atcaccctcacctcgcccgtcatccgagaggaaaacacccgggatggagatgtaacctcg
agtatggtgaaagacccagcggacgtcttggacaggcaaaaatgccttgacgctctggct
gccctacgccacgctaagtggttccaggctagggctaatggactccagtcatgtgtgatt
gtcattcgaatactgcgtgacctttgtcagcgagtacccacctggtctgcctttcctagc
tgggctatggagcttttggtggagaaggccattagcagtgccgctggaccaatgagccct
ggagatgctctgcgacgagtctttgaatgtatttcctcaggcattctgctgtctggtgct
ccaggattgatagacccctgtgagaagaatccaacagatacactggctaccatggaagag
cagcagagagaggacattacgtcaagcgctcagtttgccttgaggctgctggcattccgt
cagattcacaaggttctgggtatggaccccttgccccagatgaactcccgcttcaacgta
cggaataaccgcaagaggcgtcgcgacaacagcgacggggcggatggattcgaagccgag
gggaagaaggacaagaaggactacgaggggttctga
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integrated database retrieval system
