Garra rufa (doctor fish): 141334476
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Entry
141334476 CDS
T11039
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
grf Garra rufa (doctor fish)
Pathway
grf03015
mRNA surveillance pathway
grf04110
Cell cycle
grf04114
Oocyte meiosis
grf04261
Adrenergic signaling in cardiomyocytes
grf04350
TGF-beta signaling pathway
grf04382
Cornified envelope formation
grf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141334476
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
141334476
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
141334476
04114 Oocyte meiosis
141334476
09144 Cellular community - eukaryotes
04530 Tight junction
141334476
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
141334476
09158 Development and regeneration
04382 Cornified envelope formation
141334476
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
grf01009
]
141334476
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141334476
03036 Chromosome and associated proteins [BR:
grf03036
]
141334476
Protein phosphatases and associated proteins [BR:
grf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
141334476
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
141334476
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
141334476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EZ
Adaptin_N
PDS5
Cnd1
SCD
CLASP_N
M11L
HEAT_ECM29
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
141334476
NCBI-ProteinID:
XP_073695665
LinkDB
All DBs
Position
5:24356941..24374316
Genome browser
AA seq
589 aa
AA seq
DB search
MAGADSDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIY
DEDEVLLALAEQLGNFTMLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRKISHEHS
PVDLEVHFEPLVKRLASGDWFTSRTSACGLFSVCYPRVSSTVKAEIRQHFRTLCSDDTPM
VRRAAASKLGEFAKVLELEYVKSDIISLFTALASDEQDSVRLLAVEAGVSIATLLPQEDL
EALVMPTLRQAAEDKSWRVRYMVADKFSDLQKAVGPEITKNDLVPAFQNLLKDCEAEVRA
AAANKVKEFCENLPEDSRETIIMTHILPCVKELVSDTNQHVKSALASVIMGLSTILGKDN
TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR
LAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATCNLMKLVEKFGAEWAQN
TIVPKVLGMANDPNYLHRMTTLFCINALSEVCGQEITTKHMLPVVFKMSNDQVANVRFNV
AKSLQKIGPVLDSNCLQTEVKPVLEKLASDQDMDVKYFAQEAISVLSLA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcagacagcgacgactctctttaccctattgccgtactaattgacgaatta
aggaatgaagatgttcagttacgattgaacagcattaagaaactgtccaccatcgcctta
gctctaggcgttgaaagaacacgcactgaacttctgcctttcctcacagataccatctat
gatgaggatgaagttctgcttgctcttgctgaacaactggggaacttcaccatgctggtt
ggaggccctgaatatgtgcactgtctccttccccctttggagagtttggctacggttgaa
gaaacagtggtgcgagacaaggcagtggagtcgctgcggaagatctcccatgaacactct
ccagtggacctggaagtgcactttgagccactggtgaagcgtttggccagcggagactgg
ttcacatcgcgtacctctgcctgcggacttttcagtgtctgctacccacgagtttccagt
acagtcaaagctgagattcgccagcacttccgtaccctgtgttctgatgatactcccatg
gtgcggcgtgcagccgcctccaagctgggtgaatttgccaaagtgttagagctggagtat
gtcaagagtgacatcatttctctcttcactgcattggcatctgacgaacaggactctgtt
cgtctcctggctgtggaggctggcgtcagtattgccactctgttgcctcaagaggatctg
gaagctctggttatgcccactctgcgccaggcagcagaggacaagtcctggagggttcgc
tacatggttgcagacaaattctctgatctgcagaaagctgtgggtccagaaatcacaaag
aatgacctagtgccagccttccagaaccttttgaaagactgcgaggctgaggttcgtgct
gctgctgcaaacaaagtaaaagaattctgtgaaaatttgccggaagacagtagagagact
atcatcatgacacacattctcccctgcgttaaggaacttgtctcagacactaatcagcat
gtgaagtctgcactggcgtcagtcattatgggcctctccaccatcttaggcaaagacaac
accattgagcacctgcttccccttttcctggcccagctcaaagatgagtgtccagaggtt
cgcctcaacatcatctccaacttggactgcgtgaacgaggtgattggaatccgccagctt
tctcagtctttgcttccggcgattgttgagctcgctgaggatgccaaatggcgagtgcga
ctggcaatcattgaatacatgccccttctggctggacagctgggtgtagagttctttgat
gagaaactcaattctctatgtatggcgtggctcgttgatcatgtgtatgccatcagagag
gcagccacctgtaacctgatgaagctagtggagaagtttggagcagagtgggcacagaac
accattgtgcccaaagtgctgggcatggctaatgacccaaactacctgcacaggatgact
accctcttctgcattaatgctctgtctgaggtgtgtggacaggagattaccaccaaacac
atgctccctgtagtgttcaagatgtccaacgaccaggtagccaatgtacgcttcaatgtg
gccaagtctcttcagaagattggacctgtgctggacagcaactgtctgcagacagaggtg
aaaccagtgttggagaagctggcatcagatcaagacatggatgtgaaatatttcgcccaa
gaggccatcagtgttctttccctggcctaa
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