Garra rufa (doctor fish): 141334544
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Entry
141334544 CDS
T11039
Name
(RefSeq) long-chain-fatty-acid--CoA ligase ACSBG2-like
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00061
Fatty acid biosynthesis
grf00071
Fatty acid degradation
grf01100
Metabolic pathways
grf01212
Fatty acid metabolism
grf03320
PPAR signaling pathway
grf04920
Adipocytokine signaling pathway
Module
grf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
141334544
00071 Fatty acid degradation
141334544
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
141334544
03320 PPAR signaling pathway
141334544
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
grf01004
]
141334544
Enzymes [BR:
grf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
141334544
Lipid biosynthesis proteins [BR:
grf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
141334544
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
141334544
NCBI-ProteinID:
XP_073695757
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All DBs
Position
5:21149572..21163484
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AA seq
716 aa
AA seq
DB search
MSADEFISQSDSNEIPVSENDAEGSVKTEEYQTVALHDSKNQLNGDCSFSAMNSNTGDEP
AIPLTPGDVRLAQAQELWSTARDKPVKLRMAASGPGSEPPMTIHQMFMATVQKYGDYPAL
RSKKDGMWVTLTYKEYYQQTRAAAKSFLKLGLERFHGVGILGFNSPEWFIADIGCILAGG
LATGIYTTNSPEACQYVAENCEANVLVVENNKQLIKILQVRDQLPHLKAIVQYKDELEQK
LPNVYTWAEFMKLGESVPDSELDTVIDSQKANDCCTLIYTSGTTGNPKGVMLSHDNITWT
ASSAGLMVNLRMAEEELVSYLPLSHVAAQVQDMWICMRVAGVANFAEPDALKGSLANTLR
EVRPTSFMGVPRVWEKMQEAMKSAGAKSSITKKKIADWAKGIGLQASYNAMDGDSSVPWG
FTLANALVFKTVRKALGLDRCRACYTGAAPITKDTLEYFMSLYIPVFELYGMSESTGPHS
VSCAEGYRIMSCGKVLTGCKTKLDKPDADGNGEVCFWGRHVFMGYLNMPDKTEEALDADG
WLHSGDLGKHDNENYLYITGRIKELIITAGGENVAPVPIEDALKEEVSIISNVMLVGDKK
KFLSMLLTLKCTVDDNGDPTDELTPLAVEYCRQHGVIATKVSEIINKKEPAIYKAIQEGI
DRTNAKATSNAQKVQKWTILPRDFSISGGELGPTMKLKRPVVSKMYQEDINKFYGE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgatgagtttatatcacagagtgattccaatgaaattcctgtctctgaaaat
gatgccgaaggttctgttaagactgaagaatatcagaccgtagcactccacgactccaaa
aaccaactgaatggggattgttcgttttctgcaatgaacagtaacacaggcgacgaaccg
gctataccattgacgccaggagatgtgcgtctcgctcaagcccaggagctatggagcaca
gccagagacaagccagtcaaactgaggatggcggcgtcgggacccggctcagaacctcca
atgacgatccaccagatgttcatggctacagtgcagaagtacggagactatcctgctctc
cgttccaagaaagatggaatgtgggtcacactgacttataaggaatactatcaacagaca
agagcggcagccaaaagctttctgaagcttggcttggagcgattccatggtgtcggtatt
ctgggcttcaactctcctgaatggtttatagcagacatcggatgtatcctagctggggga
ctggccactggaatctacaccactaactctccagaggcttgccagtatgtcgctgaaaac
tgtgaagctaatgtcctggtggtggaaaacaacaaacaactgatcaaaatcctccaggtc
agagatcagctgccacatttgaaggcaattgttcagtacaaggatgaactggagcagaag
ttaccaaatgtatatacgtgggctgaatttatgaagctgggagagagtgtccctgattct
gagctggacacggtgattgacagtcaaaaggccaatgactgctgcactttaatctacaca
tcaggcaccacagggaatcccaaaggggtcatgctcagccatgataatatcacttggaca
gccagctcagcaggtctcatggtcaatctgcggatggctgaggaggaactcgtgagctac
ttgcccttgagtcacgtggcggctcaggtccaagacatgtggatctgcatgagggttgct
ggcgtagccaatttcgctgagccggatgccctgaagggctctctggccaacactctgaga
gaggtgcgtcccacaagcttcatgggagttcctcgagtgtgggaaaaaatgcaggaagca
atgaaatccgctggtgctaagtcttccatcacaaagaagaagattgcagactgggccaag
gggattggacttcaggctagctataatgccatggatggtgattcctcagtgccgtggggc
ttcacgttggccaatgccctggttttcaagaccgtaaggaaagctctgggccttgaccgc
tgtagagcctgttacacaggtgcagctccaatcaccaaagacacgctggagtacttcatg
agcctttacattcctgtctttgagctgtacggcatgagcgagagcaccggacctcactct
gtctcctgtgccgagggttatcgcattatgagttgtggtaaggtgttgactggctgcaaa
actaagttagacaagccagatgcagatgggaacggagaggtctgtttctgggggaggcat
gtgtttatgggatacctgaacatgccagacaagactgaggaggcactggatgcagacggg
tggcttcactcgggagacctgggcaaacacgacaatgagaactacctgtacatcactggc
agaataaaagaattaatcattactgctggaggagaaaatgtagcacccgtccctattgag
gacgccctaaaggaggaggtgtcaatcatcagcaatgtcatgctggttggagacaaaaag
aagtttctctctatgcttctcacattgaagtgtactgttgatgacaatggagaccccaca
gatgaactgaccccattagcggtggagtattgtcggcagcatggtgtaattgccaccaaa
gtttcagaaatcattaacaaaaaagagccagccatttacaaagctatccaggaaggcata
gaccgcacaaatgctaaagccacatccaatgcccagaaagtccagaagtggaccatcctt
ccacgagacttctccatatctggtggagaacttggtccaaccatgaagctcaagagacct
gttgtcagtaaaatgtatcaagaagatataaacaaattttatggtgaataa
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